RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 APOBEC3BQ9UH17 382 aaKnown RBP9.56□□□□□ -0.88
BRCA1-226ENST00000591534 LUC7L2Q9Y383 392 aaKnown RBP9.56□□□□□ -0.88
BRCA1-226ENST00000591534 FHOD1Q9Y613 1164 aa9.56□□□□□ -0.88
BRCA1-226ENST00000591534 AKR1B15C9JRZ8 316 aaPredicted RBP9.55□□□□□ -0.88
BRCA1-226ENST00000591534 LMO7DNF2Z398 122 aa9.55□□□□□ -0.88
BRCA1-226ENST00000591534 GOLGA8SH3BPF8 625 aa9.55□□□□□ -0.88
BRCA1-226ENST00000591534 J3QKU1 62 aa9.55□□□□□ -0.88
BRCA1-226ENST00000591534 KRIT1O00522 736 aa9.55□□□□□ -0.88
BRCA1-226ENST00000591534 EPHB6O15197 1021 aa9.55□□□□□ -0.88
BRCA1-226ENST00000591534 RAMP2O60895 175 aa9.55□□□□□ -0.88
BRCA1-226ENST00000591534 TNFRSF21O75509 655 aa9.55□□□□□ -0.88
BRCA1-226ENST00000591534 ZNF821O75541 412 aaPredicted RBP9.55□□□□□ -0.88
BRCA1-226ENST00000591534 ZMPSTE24O75844 475 aa9.55□□□□□ -0.88
BRCA1-226ENST00000591534 C1QL1O75973 258 aa9.55□□□□□ -0.88
BRCA1-226ENST00000591534 NEBLO76041 1014 aa9.55□□□□□ -0.88
BRCA1-226ENST00000591534 TM7SF2O76062 418 aa9.55□□□□□ -0.88
BRCA1-226ENST00000591534 TUBB4AP04350 444 aa9.55□□□□□ -0.88
BRCA1-226ENST00000591534 ALPIP09923 528 aa9.55□□□□□ -0.88
BRCA1-226ENST00000591534 SNRPBP14678 240 aaKnown RBP9.55□□□□□ -0.88
BRCA1-226ENST00000591534 MSNP26038 577 aaKnown RBP9.55□□□□□ -0.88
BRCA1-226ENST00000591534 HTR1BP28222 390 aa9.55□□□□□ -0.88
BRCA1-226ENST00000591534 SDC4P31431 198 aa9.55□□□□□ -0.88
BRCA1-226ENST00000591534 PFN3P60673 137 aa9.55□□□□□ -0.88
BRCA1-226ENST00000591534 NRG1Q02297 640 aaPredicted RBP9.55□□□□□ -0.88
BRCA1-226ENST00000591534 PPARDQ03181 441 aa9.55□□□□□ -0.88
BRCA1-226ENST00000591534 EIF3IQ13347 325 aaKnown RBP9.55□□□□□ -0.88
BRCA1-226ENST00000591534 UBAP2LQ14157 1087 aaKnown RBP9.55□□□□□ -0.88
BRCA1-226ENST00000591534 SPIDRQ14159 915 aa9.55□□□□□ -0.88
BRCA1-226ENST00000591534 DRAP1Q14919 205 aaPredicted RBP9.55□□□□□ -0.88
BRCA1-226ENST00000591534 ELOCQ15369 112 aa9.55□□□□□ -0.88
BRCA1-226ENST00000591534 DEFB133Q30KQ1 61 aa9.55□□□□□ -0.88
BRCA1-226ENST00000591534 MYLK3Q32MK0 819 aa9.55□□□□□ -0.88
BRCA1-226ENST00000591534 PRRT3Q5FWE3 981 aa9.55□□□□□ -0.88
BRCA1-226ENST00000591534 C3orf38Q5JPI3 329 aa9.55□□□□□ -0.88
BRCA1-226ENST00000591534 FAXCQ5TGI0 409 aa9.55□□□□□ -0.88
BRCA1-226ENST00000591534 OTUD1Q5VV17 481 aaPredicted RBP9.55□□□□□ -0.88
BRCA1-226ENST00000591534 LVRNQ6Q4G3 990 aa9.55□□□□□ -0.88
BRCA1-226ENST00000591534 GDPD4Q6W3E5 623 aa9.55□□□□□ -0.88
BRCA1-226ENST00000591534 CCDC81Q6ZN84 652 aa9.55□□□□□ -0.88
BRCA1-226ENST00000591534 PARS2Q7L3T8 475 aaKnown RBP9.55□□□□□ -0.88
BRCA1-226ENST00000591534 FAM131BQ86XD5 332 aa9.55□□□□□ -0.88
BRCA1-226ENST00000591534 ZNF354CQ86Y25 554 aa9.55□□□□□ -0.88
BRCA1-226ENST00000591534 OR2AP1Q8NGE2 309 aa9.55□□□□□ -0.88
BRCA1-226ENST00000591534 SNRNP27Q8WVK2 155 aaKnown RBP9.55□□□□□ -0.88
BRCA1-226ENST00000591534 SYN2Q92777 582 aaPredicted RBP9.55□□□□□ -0.88
BRCA1-226ENST00000591534 VCPIP1Q96JH7 1222 aa9.55□□□□□ -0.88
BRCA1-226ENST00000591534 GDAP1L1Q96MZ0 367 aa9.55□□□□□ -0.88
BRCA1-226ENST00000591534 PANX2Q96RD6 677 aa9.55□□□□□ -0.88
BRCA1-226ENST00000591534 TM6SF2Q9BZW4 377 aa9.55□□□□□ -0.88
BRCA1-226ENST00000591534 STRADBQ9C0K7 418 aa9.55□□□□□ -0.88
BRCA1-226ENST00000591534 VPS16Q9H269 839 aa9.55□□□□□ -0.88
BRCA1-226ENST00000591534 SATB2Q9UPW6 733 aa9.55□□□□□ -0.88
BRCA1-226ENST00000591534 SNX10Q9Y5X0 201 aa9.55□□□□□ -0.88
BRCA1-226ENST00000591534 CCDC187A0A096LP49 1063 aa9.54□□□□□ -0.88
BRCA1-226ENST00000591534 LY6G6EA0A0G2JKS1 128 aa9.54□□□□□ -0.88
BRCA1-226ENST00000591534 ANKRD62A6NC57 917 aa9.54□□□□□ -0.88
BRCA1-226ENST00000591534 GOLGA6L9A6NEM1 432 aa9.54□□□□□ -0.88
BRCA1-226ENST00000591534 MUSKO15146 869 aa9.54□□□□□ -0.88
BRCA1-226ENST00000591534 IGSF6O95976 241 aa9.54□□□□□ -0.88
BRCA1-226ENST00000591534 RPLP1P05386 114 aaKnown RBP9.54□□□□□ -0.88
BRCA1-226ENST00000591534 ATP1A3P13637 1013 aa9.54□□□□□ -0.88
BRCA1-226ENST00000591534 C6P13671 934 aa9.54□□□□□ -0.88
BRCA1-226ENST00000591534 CTSEP14091 401 aa9.54□□□□□ -0.88
BRCA1-226ENST00000591534 TFE3P19532 575 aaPredicted RBP9.54□□□□□ -0.88
BRCA1-226ENST00000591534 TGM2P21980 687 aa9.54□□□□□ -0.88
BRCA1-226ENST00000591534 ADRA1BP35368 520 aa9.54□□□□□ -0.88
BRCA1-226ENST00000591534 FLT3P36888 993 aa9.54□□□□□ -0.88
BRCA1-226ENST00000591534 PEX5P50542 639 aa9.54□□□□□ -0.88
BRCA1-226ENST00000591534 ADKP55263 362 aaKnown RBP9.54□□□□□ -0.88
BRCA1-226ENST00000591534 ARF5P84085 180 aa9.54□□□□□ -0.88
BRCA1-226ENST00000591534 ATP11AP98196 1134 aa9.54□□□□□ -0.88
BRCA1-226ENST00000591534 ELP6Q0PNE2 266 aa9.54□□□□□ -0.88
BRCA1-226ENST00000591534 FGL2Q14314 439 aa9.54□□□□□ -0.88
BRCA1-226ENST00000591534 GRM3Q14832 879 aa9.54□□□□□ -0.88
BRCA1-226ENST00000591534 CFAP58Q5T655 872 aa9.54□□□□□ -0.88
BRCA1-226ENST00000591534 KLHDC7AQ5VTJ3 777 aa9.54□□□□□ -0.88
BRCA1-226ENST00000591534 TAF3Q5VWG9 929 aa9.54□□□□□ -0.88
BRCA1-226ENST00000591534 PPP1R2P3Q6NXS1 205 aa9.54□□□□□ -0.88
BRCA1-226ENST00000591534 GUSBP11Q6P575 273 aa9.54□□□□□ -0.88
BRCA1-226ENST00000591534 FOXR1Q6PIV2 292 aa9.54□□□□□ -0.88
BRCA1-226ENST00000591534 XKR5Q6UX68 686 aa9.54□□□□□ -0.88
BRCA1-226ENST00000591534 MACC1Q6ZN28 852 aa9.54□□□□□ -0.88
BRCA1-226ENST00000591534 PHACTR4Q8IZ21 702 aa9.54□□□□□ -0.88
BRCA1-226ENST00000591534 OR8K1Q8NGG5 319 aa9.54□□□□□ -0.88
BRCA1-226ENST00000591534 ARHGEF2Q92974 986 aaKnown RBP9.54□□□□□ -0.88
BRCA1-226ENST00000591534 TBC1D31Q96DN5 1066 aa9.54□□□□□ -0.88
BRCA1-226ENST00000591534 ATXN7L3BQ96GX2 97 aa9.54□□□□□ -0.88
BRCA1-226ENST00000591534 CFAP57Q96MR6 1250 aa9.54□□□□□ -0.88
BRCA1-226ENST00000591534 KLF6Q99612 283 aaPredicted RBP9.54□□□□□ -0.88
BRCA1-226ENST00000591534 BOCQ9BWV1 1114 aa9.54□□□□□ -0.88
BRCA1-226ENST00000591534 STK33Q9BYT3 514 aa9.54□□□□□ -0.88
BRCA1-226ENST00000591534 CPNE5Q9HCH3 593 aa9.54□□□□□ -0.88
BRCA1-226ENST00000591534 ASCL3Q9NQ33 180 aa9.54□□□□□ -0.88
BRCA1-226ENST00000591534 ANLNQ9NQW6 1124 aa9.54□□□□□ -0.88
BRCA1-226ENST00000591534 TMEM59LQ9UK28 342 aa9.54□□□□□ -0.88
BRCA1-226ENST00000591534 PADI4Q9UM07 663 aa9.54□□□□□ -0.88
BRCA1-226ENST00000591534 U3KQA8 63 aa9.54□□□□□ -0.88
BRCA1-226ENST00000591534 B8ZZF3 427 aa9.53□□□□□ -0.88
BRCA1-226ENST00000591534 I6L893 689 aaPredicted RBP9.53□□□□□ -0.88
BRCA1-226ENST00000591534 RAD51BO15315 384 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms