RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 DNAI2Q9GZS0 605 aa6.15□□□□□ -1.42
VPS25-204ENST00000589577 KCTD10Q9H3F6 313 aa6.15□□□□□ -1.42
VPS25-204ENST00000589577 CBX8Q9HC52 389 aa6.15□□□□□ -1.42
VPS25-204ENST00000589577 MRPL40Q9NQ50 206 aaKnown RBP6.15□□□□□ -1.42
VPS25-204ENST00000589577 MAP10Q9P2G4 905 aa6.15□□□□□ -1.42
VPS25-204ENST00000589577 VPS51Q9UID3 782 aa6.15□□□□□ -1.42
VPS25-204ENST00000589577 VPS28Q9UK41 221 aa6.15□□□□□ -1.42
VPS25-204ENST00000589577 CROTQ9UKG9 612 aa6.15□□□□□ -1.42
VPS25-204ENST00000589577 TSPAN16Q9UKR8 245 aa6.15□□□□□ -1.42
VPS25-204ENST00000589577 PCDHGA9Q9Y5G4 932 aaKnown RBP6.15□□□□□ -1.42
VPS25-204ENST00000589577 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.15□□□□□ -1.42
VPS25-204ENST00000589577 COL6A5A8TX70 2615 aa6.15□□□□□ -1.43
VPS25-204ENST00000589577 FLNAP21333 2647 aaKnown RBP6.15□□□□□ -1.43
VPS25-204ENST00000589577 FN1P02751 2386 aaKnown RBP6.14□□□□□ -1.43
VPS25-204ENST00000589577 CDC14CA4D256 554 aa6.14□□□□□ -1.43
VPS25-204ENST00000589577 BHMG1C9JSJ3 638 aaPredicted RBP6.14□□□□□ -1.43
VPS25-204ENST00000589577 F5H5T6 163 aa6.14□□□□□ -1.43
VPS25-204ENST00000589577 TOR1BO14657 336 aa6.14□□□□□ -1.43
VPS25-204ENST00000589577 AREL1O15033 823 aa6.14□□□□□ -1.43
VPS25-204ENST00000589577 ENDOD1O94919 500 aa6.14□□□□□ -1.43
VPS25-204ENST00000589577 IGLV3-25P01717 112 aa6.14□□□□□ -1.43
VPS25-204ENST00000589577 LCP1P13796 627 aa6.14□□□□□ -1.43
VPS25-204ENST00000589577 ZNF28P17035 718 aa6.14□□□□□ -1.43
VPS25-204ENST00000589577 GKP32189 559 aa6.14□□□□□ -1.43
VPS25-204ENST00000589577 CSTF2P33240 577 aaKnown RBP eCLIP6.14□□□□□ -1.43
VPS25-204ENST00000589577 PTGER4P35408 488 aa6.14□□□□□ -1.43
VPS25-204ENST00000589577 DLSTP36957 453 aa6.14□□□□□ -1.43
VPS25-204ENST00000589577 VAMP7P51809 220 aa6.14□□□□□ -1.43
VPS25-204ENST00000589577 PITX1P78337 314 aaPredicted RBP6.14□□□□□ -1.43
VPS25-204ENST00000589577 MC2RQ01718 297 aa6.14□□□□□ -1.43
VPS25-204ENST00000589577 ENPEPQ07075 957 aa6.14□□□□□ -1.43
VPS25-204ENST00000589577 BST2Q10589 180 aaKnown RBP6.14□□□□□ -1.43
VPS25-204ENST00000589577 SQSTM1Q13501 440 aa6.14□□□□□ -1.43
VPS25-204ENST00000589577 EIF4EBP2Q13542 120 aaPredicted RBP6.14□□□□□ -1.43
VPS25-204ENST00000589577 NFATC4Q14934 902 aa6.14□□□□□ -1.43
VPS25-204ENST00000589577 MAN2A1Q16706 1144 aa6.14□□□□□ -1.43
VPS25-204ENST00000589577 ZCWPW2Q504Y3 356 aa6.14□□□□□ -1.43
VPS25-204ENST00000589577 ZC3H12AQ5D1E8 599 aaKnown RBP6.14□□□□□ -1.43
VPS25-204ENST00000589577 LRRC73Q5JTD7 316 aa6.14□□□□□ -1.43
VPS25-204ENST00000589577 MIIPQ5JXC2 388 aa6.14□□□□□ -1.43
VPS25-204ENST00000589577 SYPL2Q5VXT5 272 aa6.14□□□□□ -1.43
VPS25-204ENST00000589577 FBXL22Q6P050 247 aa6.14□□□□□ -1.43
VPS25-204ENST00000589577 ENPP7Q6UWV6 458 aa6.14□□□□□ -1.43
VPS25-204ENST00000589577 ZNF517Q6ZMY9 492 aaPredicted RBP6.14□□□□□ -1.43
VPS25-204ENST00000589577 KDELC2Q7Z4H8 507 aa6.14□□□□□ -1.43
VPS25-204ENST00000589577 LUZP1Q86V48 1076 aa6.14□□□□□ -1.43
VPS25-204ENST00000589577 ZNF295-AS1Q8N0V1 137 aa6.14□□□□□ -1.43
VPS25-204ENST00000589577 RBMXL3Q8N7X1 1067 aaKnown RBP6.14□□□□□ -1.43
VPS25-204ENST00000589577 ATP11CQ8NB49 1132 aa6.14□□□□□ -1.43
VPS25-204ENST00000589577 UBA3Q8TBC4 463 aa6.14□□□□□ -1.43
VPS25-204ENST00000589577 TMC2Q8TDI7 906 aa6.14□□□□□ -1.43
VPS25-204ENST00000589577 PATE1Q8WXA2 126 aa6.14□□□□□ -1.43
VPS25-204ENST00000589577 OR1E3Q8WZA6 343 aa6.14□□□□□ -1.43
VPS25-204ENST00000589577 IRGQQ8WZA9 623 aa6.14□□□□□ -1.43
VPS25-204ENST00000589577 BTN2A3PQ96KV6 586 aa6.14□□□□□ -1.43
VPS25-204ENST00000589577 CCDC114Q96M63 670 aa6.14□□□□□ -1.43
VPS25-204ENST00000589577 PCMTD1Q96MG8 357 aaPredicted RBP6.14□□□□□ -1.43
VPS25-204ENST00000589577 SERPINB11Q96P15 392 aa6.14□□□□□ -1.43
VPS25-204ENST00000589577 BARD1Q99728 777 aaKnown RBP6.14□□□□□ -1.43
VPS25-204ENST00000589577 SLC25A23Q9BV35 468 aa6.14□□□□□ -1.43
VPS25-204ENST00000589577 TRIM5Q9C035 493 aa6.14□□□□□ -1.43
VPS25-204ENST00000589577 FGF22Q9HCT0 170 aa6.14□□□□□ -1.43
VPS25-204ENST00000589577 CISHQ9NSE2 258 aa6.14□□□□□ -1.43
VPS25-204ENST00000589577 SPATS2LQ9NUQ6 558 aaKnown RBP6.14□□□□□ -1.43
VPS25-204ENST00000589577 DMAC2Q9NW81 257 aa6.14□□□□□ -1.43
VPS25-204ENST00000589577 KLQ9UEF7 1012 aa6.14□□□□□ -1.43
VPS25-204ENST00000589577 TBC1D30Q9Y2I9 924 aa6.14□□□□□ -1.43
VPS25-204ENST00000589577 FARP1Q9Y4F1 1045 aaPredicted RBP6.14□□□□□ -1.43
VPS25-204ENST00000589577 OR1A2Q9Y585 309 aa6.14□□□□□ -1.43
VPS25-204ENST00000589577 DGKBQ9Y6T7 804 aa6.14□□□□□ -1.43
VPS25-204ENST00000589577 ATRQ13535 2644 aa6.14□□□□□ -1.43
VPS25-204ENST00000589577 MN1Q10571 1320 aaPredicted RBP6.14□□□□□ -1.43
VPS25-204ENST00000589577 FER1L5A0AVI2 2057 aa6.14□□□□□ -1.43
VPS25-204ENST00000589577 RTTNQ86VV8 2226 aa6.14□□□□□ -1.43
VPS25-204ENST00000589577 CSPG4Q6UVK1 2322 aa6.14□□□□□ -1.43
VPS25-204ENST00000589577 JMJD1CQ15652 2540 aa6.14□□□□□ -1.43
VPS25-204ENST00000589577 VPS13CQ709C8 3753 aa6.13□□□□□ -1.43
VPS25-204ENST00000589577 IGHV1OR21-1A0A087WYE8 117 aa6.13□□□□□ -1.43
VPS25-204ENST00000589577 TMEM202A6NGA9 273 aa6.13□□□□□ -1.43
VPS25-204ENST00000589577 C16orf96A6NNT2 1141 aa6.13□□□□□ -1.43
VPS25-204ENST00000589577 O00370 1275 aa6.13□□□□□ -1.43
VPS25-204ENST00000589577 LRRTM2O43300 516 aa6.13□□□□□ -1.43
VPS25-204ENST00000589577 NRDCO43847 1150 aa6.13□□□□□ -1.43
VPS25-204ENST00000589577 PRICKLE3O43900 615 aaPredicted RBP6.13□□□□□ -1.43
VPS25-204ENST00000589577 MMP20O60882 483 aa6.13□□□□□ -1.43
VPS25-204ENST00000589577 CREG1O75629 220 aa6.13□□□□□ -1.43
VPS25-204ENST00000589577 CEACAM4O75871 244 aa6.13□□□□□ -1.43
VPS25-204ENST00000589577 ITIH2P19823 946 aa6.13□□□□□ -1.43
VPS25-204ENST00000589577 NFKBIAP25963 317 aa6.13□□□□□ -1.43
VPS25-204ENST00000589577 ITGA3P26006 1051 aa6.13□□□□□ -1.43
VPS25-204ENST00000589577 HNRNPH3P31942 346 aaKnown RBP6.13□□□□□ -1.43
VPS25-204ENST00000589577 GTF2H1P32780 548 aa6.13□□□□□ -1.43
VPS25-204ENST00000589577 GGCXP38435 758 aa6.13□□□□□ -1.43
VPS25-204ENST00000589577 RGS7P49802 495 aa6.13□□□□□ -1.43
VPS25-204ENST00000589577 MXI1P50539 228 aa6.13□□□□□ -1.43
VPS25-204ENST00000589577 PEX5P50542 639 aa6.13□□□□□ -1.43
VPS25-204ENST00000589577 CCNHP51946 323 aaPredicted RBP6.13□□□□□ -1.43
VPS25-204ENST00000589577 ITGA1P56199 1179 aa6.13□□□□□ -1.43
VPS25-204ENST00000589577 SLC8A3P57103 927 aa6.13□□□□□ -1.43
VPS25-204ENST00000589577 RNASE9P60153 205 aaKnown RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 141.4 ms