RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 VOPP1Q96AW1 172 aa11.46□□□□□ -0.57
SMAD4-205ENST00000588745 CENPTQ96BT3 561 aa11.46□□□□□ -0.57
SMAD4-205ENST00000588745 APOPT1Q96IL0 206 aa11.46□□□□□ -0.57
SMAD4-205ENST00000588745 DNAJC1Q96KC8 554 aaKnown RBP11.46□□□□□ -0.57
SMAD4-205ENST00000588745 NECTIN4Q96NY8 510 aa11.46□□□□□ -0.57
SMAD4-205ENST00000588745 KXD1Q9BQD3 176 aa11.46□□□□□ -0.57
SMAD4-205ENST00000588745 MCMBPQ9BTE3 642 aa11.46□□□□□ -0.57
SMAD4-205ENST00000588745 PLA2G2FQ9BZM2 168 aa11.46□□□□□ -0.57
SMAD4-205ENST00000588745 CIPCQ9C0C6 399 aa11.46□□□□□ -0.57
SMAD4-205ENST00000588745 MFSD1Q9H3U5 465 aa11.46□□□□□ -0.57
SMAD4-205ENST00000588745 MKS1Q9NXB0 559 aa11.46□□□□□ -0.57
SMAD4-205ENST00000588745 NKIRAS1Q9NYS0 192 aa11.46□□□□□ -0.57
SMAD4-205ENST00000588745 DEC1Q9P2X7 70 aa11.46□□□□□ -0.57
SMAD4-205ENST00000588745 SLCO3A1Q9UIG8 710 aa11.46□□□□□ -0.57
SMAD4-205ENST00000588745 KCTD3Q9Y597 815 aa11.46□□□□□ -0.57
SMAD4-205ENST00000588745 ARL5AQ9Y689 179 aa11.46□□□□□ -0.57
SMAD4-205ENST00000588745 C2orf81A6NN90 581 aa11.45□□□□□ -0.58
SMAD4-205ENST00000588745 WASH3PC4AMC7 463 aa11.45□□□□□ -0.58
SMAD4-205ENST00000588745 GOLGA8RI6L899 631 aa11.45□□□□□ -0.58
SMAD4-205ENST00000588745 AURKAO14965 403 aa11.45□□□□□ -0.58
SMAD4-205ENST00000588745 BNIP3LO60238 219 aa11.45□□□□□ -0.58
SMAD4-205ENST00000588745 ALDOAP04075 364 aaKnown RBP11.45□□□□□ -0.58
SMAD4-205ENST00000588745 ATP5BP06576 529 aaKnown RBP11.45□□□□□ -0.58
SMAD4-205ENST00000588745 F7P08709 466 aaPredicted RBP11.45□□□□□ -0.58
SMAD4-205ENST00000588745 DLDP09622 509 aaKnown RBP11.45□□□□□ -0.58
SMAD4-205ENST00000588745 PYGBP11216 843 aa11.45□□□□□ -0.58
SMAD4-205ENST00000588745 PSMA3P25788 255 aa11.45□□□□□ -0.58
SMAD4-205ENST00000588745 SLC8A1P32418 973 aa11.45□□□□□ -0.58
SMAD4-205ENST00000588745 NNMTP40261 264 aa11.45□□□□□ -0.58
SMAD4-205ENST00000588745 SLC6A11P48066 632 aa11.45□□□□□ -0.58
SMAD4-205ENST00000588745 SERPINB8P50452 374 aa11.45□□□□□ -0.58
SMAD4-205ENST00000588745 PRAMEP78395 509 aa11.45□□□□□ -0.58
SMAD4-205ENST00000588745 KDSRQ06136 332 aa11.45□□□□□ -0.58
SMAD4-205ENST00000588745 RAD51Q06609 339 aa11.45□□□□□ -0.58
SMAD4-205ENST00000588745 RUNX3Q13761 415 aa11.45□□□□□ -0.58
SMAD4-205ENST00000588745 GRM3Q14832 879 aa11.45□□□□□ -0.58
SMAD4-205ENST00000588745 EIF4HQ15056 248 aaKnown RBP11.45□□□□□ -0.58
SMAD4-205ENST00000588745 PTPRNQ16849 979 aa11.45□□□□□ -0.58
SMAD4-205ENST00000588745 NEPROQ6NW34 567 aa11.45□□□□□ -0.58
SMAD4-205ENST00000588745 PARM1Q6UWI2 310 aa11.45□□□□□ -0.58
SMAD4-205ENST00000588745 DPY19L3Q6ZPD9 716 aa11.45□□□□□ -0.58
SMAD4-205ENST00000588745 KIAA0408Q6ZU52 694 aa11.45□□□□□ -0.58
SMAD4-205ENST00000588745 SH2D5Q6ZV89 423 aa11.45□□□□□ -0.58
SMAD4-205ENST00000588745 DENND6AQ8IWF6 608 aa11.45□□□□□ -0.58
SMAD4-205ENST00000588745 PLPP6Q8IY26 295 aa11.45□□□□□ -0.58
SMAD4-205ENST00000588745 PAF1Q8N7H5 531 aa11.45□□□□□ -0.58
SMAD4-205ENST00000588745 SMRP1Q8NCR6 262 aa11.45□□□□□ -0.58
SMAD4-205ENST00000588745 C2CD4AQ8NCU7 369 aaPredicted RBP11.45□□□□□ -0.58
SMAD4-205ENST00000588745 OR13C4Q8NGS5 318 aa11.45□□□□□ -0.58
SMAD4-205ENST00000588745 MGARPQ8TDB4 240 aa11.45□□□□□ -0.58
SMAD4-205ENST00000588745 FRS2Q8WU20 508 aa11.45□□□□□ -0.58
SMAD4-205ENST00000588745 SORCS1Q8WY21 1168 aa11.45□□□□□ -0.58
SMAD4-205ENST00000588745 MYLIPQ8WY64 445 aa11.45□□□□□ -0.58
SMAD4-205ENST00000588745 PTPRN2Q92932 1015 aa11.45□□□□□ -0.58
SMAD4-205ENST00000588745 ISL2Q96A47 359 aa11.45□□□□□ -0.58
SMAD4-205ENST00000588745 ECHDC3Q96DC8 303 aa11.45□□□□□ -0.58
SMAD4-205ENST00000588745 SGSM3Q96HU1 749 aa11.45□□□□□ -0.58
SMAD4-205ENST00000588745 SMIM14Q96QK8 99 aa11.45□□□□□ -0.58
SMAD4-205ENST00000588745 CPEB1Q9BZB8 566 aaKnown RBP11.45□□□□□ -0.58
SMAD4-205ENST00000588745 RHOJQ9H4E5 214 aa11.45□□□□□ -0.58
SMAD4-205ENST00000588745 ZDHHC6Q9H6R6 413 aa11.45□□□□□ -0.58
SMAD4-205ENST00000588745 NLE1Q9NVX2 485 aaPredicted RBP11.45□□□□□ -0.58
SMAD4-205ENST00000588745 POLR3BQ9NW08 1133 aaPredicted RBP11.45□□□□□ -0.58
SMAD4-205ENST00000588745 SLC8A2Q9UPR5 921 aa11.45□□□□□ -0.58
SMAD4-205ENST00000588745 ZNF711Q9Y462 761 aa11.45□□□□□ -0.58
SMAD4-205ENST00000588745 A0A0J9YYE9 177 aa11.44□□□□□ -0.58
SMAD4-205ENST00000588745 CAPN8A6NHC0 703 aa11.44□□□□□ -0.58
SMAD4-205ENST00000588745 TTC34A8MYJ7 566 aa11.44□□□□□ -0.58
SMAD4-205ENST00000588745 CCL22O00626 93 aa11.44□□□□□ -0.58
SMAD4-205ENST00000588745 COPEO14579 308 aa11.44□□□□□ -0.58
SMAD4-205ENST00000588745 TPP1O14773 563 aa11.44□□□□□ -0.58
SMAD4-205ENST00000588745 TM9SF1O15321 606 aa11.44□□□□□ -0.58
SMAD4-205ENST00000588745 BUD23O43709 281 aaKnown RBP11.44□□□□□ -0.58
SMAD4-205ENST00000588745 ZWINTO95229 277 aa11.44□□□□□ -0.58
SMAD4-205ENST00000588745 POP4O95707 220 aaKnown RBP11.44□□□□□ -0.58
SMAD4-205ENST00000588745 TRBC1P01850 177 aa11.44□□□□□ -0.58
SMAD4-205ENST00000588745 LPOP22079 712 aaPredicted RBP11.44□□□□□ -0.58
SMAD4-205ENST00000588745 LSP1P33241 339 aa11.44□□□□□ -0.58
SMAD4-205ENST00000588745 GJA4P35212 333 aa11.44□□□□□ -0.58
SMAD4-205ENST00000588745 RPA3P35244 121 aaPredicted RBP11.44□□□□□ -0.58
SMAD4-205ENST00000588745 OPRD1P41143 372 aa11.44□□□□□ -0.58
SMAD4-205ENST00000588745 ABL2P42684 1182 aa11.44□□□□□ -0.58
SMAD4-205ENST00000588745 MAGEA12P43365 314 aa11.44□□□□□ -0.58
SMAD4-205ENST00000588745 RECQLP46063 649 aaPredicted RBP11.44□□□□□ -0.58
SMAD4-205ENST00000588745 CD151P48509 253 aa11.44□□□□□ -0.58
SMAD4-205ENST00000588745 NEK3P51956 506 aa11.44□□□□□ -0.58
SMAD4-205ENST00000588745 TMPRSS15P98073 1019 aa11.44□□□□□ -0.58
SMAD4-205ENST00000588745 MPP1Q00013 466 aa11.44□□□□□ -0.58
SMAD4-205ENST00000588745 PDE1BQ01064 536 aa11.44□□□□□ -0.58
SMAD4-205ENST00000588745 FSTL4Q6MZW2 842 aa11.44□□□□□ -0.58
SMAD4-205ENST00000588745 MTSS1LQ765P7 747 aa11.44□□□□□ -0.58
SMAD4-205ENST00000588745 ZC3HC1Q86WB0 502 aaKnown RBP11.44□□□□□ -0.58
SMAD4-205ENST00000588745 ZSWIM9Q86XI8 627 aa11.44□□□□□ -0.58
SMAD4-205ENST00000588745 MICALL1Q8N3F8 863 aa11.44□□□□□ -0.58
SMAD4-205ENST00000588745 PHTF2Q8N3S3 785 aa11.44□□□□□ -0.58
SMAD4-205ENST00000588745 TTC30BQ8N4P2 665 aa11.44□□□□□ -0.58
SMAD4-205ENST00000588745 DCLK2Q8N568 766 aa11.44□□□□□ -0.58
SMAD4-205ENST00000588745 OTUD6BQ8N6M0 293 aa11.44□□□□□ -0.58
SMAD4-205ENST00000588745 CHST14Q8NCH0 376 aa11.44□□□□□ -0.58
SMAD4-205ENST00000588745 OR2A12Q8NGT7 310 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms