RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 CDH2P19022 906 aaPredicted RBP18.67■□□□□ 0.58
DDX39A-206ENST00000587730 INTS11Q5TA45 600 aaKnown RBP18.67■□□□□ 0.58
DDX39A-206ENST00000587730 FAM171BQ6P995 826 aa18.67■□□□□ 0.58
DDX39A-206ENST00000587730 RAB44Q7Z6P3 723 aaPredicted RBP18.67■□□□□ 0.58
DDX39A-206ENST00000587730 CLYBLQ8N0X4 340 aa18.67■□□□□ 0.58
DDX39A-206ENST00000587730 TCF12Q99081 682 aa18.67■□□□□ 0.58
DDX39A-206ENST00000587730 SLC39A8Q9C0K1 460 aa18.67■□□□□ 0.58
DDX39A-206ENST00000587730 CLK4Q9HAZ1 481 aaKnown RBP18.67■□□□□ 0.58
DDX39A-206ENST00000587730 POPDC3Q9HBV1 291 aa18.67■□□□□ 0.58
DDX39A-206ENST00000587730 ATP13A1Q9HD20 1204 aa18.67■□□□□ 0.58
DDX39A-206ENST00000587730 OSER1Q9NX31 292 aa18.67■□□□□ 0.58
DDX39A-206ENST00000587730 GIT1Q9Y2X7 761 aa18.67■□□□□ 0.58
DDX39A-206ENST00000587730 VWA7Q9Y334 891 aa18.67■□□□□ 0.58
DDX39A-206ENST00000587730 SNX13Q9Y5W8 968 aa18.67■□□□□ 0.58
DDX39A-206ENST00000587730 VPS4BO75351 444 aa18.66■□□□□ 0.58
DDX39A-206ENST00000587730 PMPCBO75439 489 aa18.66■□□□□ 0.58
DDX39A-206ENST00000587730 TRPA1O75762 1119 aa18.66■□□□□ 0.58
DDX39A-206ENST00000587730 HLA-DQB2P05538 268 aa18.66■□□□□ 0.58
DDX39A-206ENST00000587730 CCDC166P0CW27 439 aa18.66■□□□□ 0.58
DDX39A-206ENST00000587730 WNT3AP56704 352 aa18.66■□□□□ 0.58
DDX39A-206ENST00000587730 USP46P62068 366 aa18.66■□□□□ 0.58
DDX39A-206ENST00000587730 DCTN2Q13561 401 aaKnown RBP18.66■□□□□ 0.58
DDX39A-206ENST00000587730 HECTD2Q5U5R9 776 aa18.66■□□□□ 0.58
DDX39A-206ENST00000587730 PAOXQ6QHF9 649 aa18.66■□□□□ 0.58
DDX39A-206ENST00000587730 LARP4Q71RC2 724 aaKnown RBP eCLIP18.66■□□□□ 0.585e-6■■■□□ 15.1
DDX39A-206ENST00000587730 ANKRD23Q86SG2 305 aa18.66■□□□□ 0.58
DDX39A-206ENST00000587730 CAMK1DQ8IU85 385 aa18.66■□□□□ 0.58
DDX39A-206ENST00000587730 MFSD2AQ8NA29 543 aa18.66■□□□□ 0.58
DDX39A-206ENST00000587730 TSPEARQ8WU66 669 aa18.66■□□□□ 0.58
DDX39A-206ENST00000587730 PPP1R14BQ96C90 147 aa18.66■□□□□ 0.58
DDX39A-206ENST00000587730 SGF29Q96ES7 293 aa18.66■□□□□ 0.58
DDX39A-206ENST00000587730 TMEM79Q9BSE2 394 aa18.66■□□□□ 0.58
DDX39A-206ENST00000587730 MFSD1Q9H3U5 465 aa18.66■□□□□ 0.58
DDX39A-206ENST00000587730 ACSS2Q9NR19 701 aa18.66■□□□□ 0.58
DDX39A-206ENST00000587730 CCDC167Q9P0B6 97 aa18.66■□□□□ 0.58
DDX39A-206ENST00000587730 SLC2A6Q9UGQ3 507 aa18.66■□□□□ 0.58
DDX39A-206ENST00000587730 CEPT1Q9Y6K0 416 aa18.66■□□□□ 0.58
DDX39A-206ENST00000587730 A0A1B0GVG6 124 aa18.65■□□□□ 0.58
DDX39A-206ENST00000587730 PRORSD1PA6NEY8 169 aa18.65■□□□□ 0.58
DDX39A-206ENST00000587730 PAGE1O75459 146 aa18.65■□□□□ 0.58
DDX39A-206ENST00000587730 CYP11A1P05108 521 aa18.65■□□□□ 0.58
DDX39A-206ENST00000587730 FGF4P08620 206 aa18.65■□□□□ 0.58
DDX39A-206ENST00000587730 FCGR1AP12314 374 aa18.65■□□□□ 0.58
DDX39A-206ENST00000587730 GJA5P36382 358 aa18.65■□□□□ 0.58
DDX39A-206ENST00000587730 NDST2P52849 883 aa18.65■□□□□ 0.58
DDX39A-206ENST00000587730 ATP6V0D1P61421 351 aa18.65■□□□□ 0.58
DDX39A-206ENST00000587730 ESRRGP62508 458 aa18.65■□□□□ 0.58
DDX39A-206ENST00000587730 KDELC1Q6UW63 502 aa18.65■□□□□ 0.58
DDX39A-206ENST00000587730 ZBTB49Q6ZSB9 765 aa18.65■□□□□ 0.58
DDX39A-206ENST00000587730 ERMP1Q7Z2K6 904 aa18.65■□□□□ 0.58
DDX39A-206ENST00000587730 HMGCLL1Q8TB92 370 aa18.65■□□□□ 0.58
DDX39A-206ENST00000587730 LRTOMTQ8WZ04 291 aa18.65■□□□□ 0.58
DDX39A-206ENST00000587730 C19orf60Q96EN9 201 aa18.65■□□□□ 0.58
DDX39A-206ENST00000587730 C1orf74Q96LT6 269 aa18.65■□□□□ 0.58
DDX39A-206ENST00000587730 ZFP42Q96MM3 310 aa18.65■□□□□ 0.58
DDX39A-206ENST00000587730 SIK2Q9H0K1 926 aa18.65■□□□□ 0.58
DDX39A-206ENST00000587730 GSTO2Q9H4Y5 243 aa18.65■□□□□ 0.58
DDX39A-206ENST00000587730 GID8Q9NWU2 228 aa18.65■□□□□ 0.58
DDX39A-206ENST00000587730 Q9Y3F1 56 aa18.65■□□□□ 0.58
DDX39A-206ENST00000587730 TREHO43280 583 aa18.65■□□□□ 0.58
DDX39A-206ENST00000587730 SLC2A3P11169 496 aa18.65■□□□□ 0.58
DDX39A-206ENST00000587730 HSD17B1P14061 328 aa18.65■□□□□ 0.58
DDX39A-206ENST00000587730 IL10P22301 178 aa18.65■□□□□ 0.58
DDX39A-206ENST00000587730 HERVK_113P63132 956 aa18.65■□□□□ 0.58
DDX39A-206ENST00000587730 HPCAP84074 193 aa18.65■□□□□ 0.58
DDX39A-206ENST00000587730 TNK2Q07912 1038 aa18.65■□□□□ 0.58
DDX39A-206ENST00000587730 ARHGAP36Q6ZRI8 547 aa18.65■□□□□ 0.58
DDX39A-206ENST00000587730 TLK2Q86UE8 772 aa18.65■□□□□ 0.58
DDX39A-206ENST00000587730 CILP2Q8IUL8 1156 aa18.65■□□□□ 0.58
DDX39A-206ENST00000587730 CROCCP3Q8IVE0 287 aa18.65■□□□□ 0.58
DDX39A-206ENST00000587730 MINDY1Q8N5J2 469 aa18.65■□□□□ 0.58
DDX39A-206ENST00000587730 FAM156AQ8NDB6 213 aa18.65■□□□□ 0.58
DDX39A-206ENST00000587730 SLC45A3Q96JT2 553 aa18.65■□□□□ 0.58
DDX39A-206ENST00000587730 FCRL2Q96LA5 508 aaPredicted RBP18.65■□□□□ 0.58
DDX39A-206ENST00000587730 ERVK-6Q9BXR3 956 aa18.65■□□□□ 0.58
DDX39A-206ENST00000587730 CCM2LQ9NUG4 571 aaPredicted RBP18.65■□□□□ 0.58
DDX39A-206ENST00000587730 FAM105AQ9NUU6 356 aa18.65■□□□□ 0.58
DDX39A-206ENST00000587730 TMEM30AQ9NV96 361 aa18.65■□□□□ 0.58
DDX39A-206ENST00000587730 ABCD2Q9UBJ2 740 aa18.65■□□□□ 0.58
DDX39A-206ENST00000587730 CNOT6Q9ULM6 557 aaKnown RBP18.65■□□□□ 0.58
DDX39A-206ENST00000587730 RNF11Q9Y3C5 154 aa18.65■□□□□ 0.58
DDX39A-206ENST00000587730 A0A087WXM4 84 aa18.64■□□□□ 0.57
DDX39A-206ENST00000587730 C7orf72A4D263 438 aa18.64■□□□□ 0.57
DDX39A-206ENST00000587730 HTRA2O43464 458 aaPredicted RBP18.64■□□□□ 0.57
DDX39A-206ENST00000587730 WISP3O95389 354 aaPredicted RBP18.64■□□□□ 0.57
DDX39A-206ENST00000587730 RPLP2P05387 115 aaKnown RBP18.64■□□□□ 0.57
DDX39A-206ENST00000587730 HOXC8P31273 242 aa18.64■□□□□ 0.57
DDX39A-206ENST00000587730 TTKP33981 857 aa18.64■□□□□ 0.57
DDX39A-206ENST00000587730 NRF1Q16656 503 aa18.64■□□□□ 0.57
DDX39A-206ENST00000587730 C6orf10Q5SRN2 563 aa18.64■□□□□ 0.57
DDX39A-206ENST00000587730 ZNF678Q5SXM1 525 aa18.64■□□□□ 0.57
DDX39A-206ENST00000587730 AMIGO2Q86SJ2 522 aa18.64■□□□□ 0.57
DDX39A-206ENST00000587730 NUP93Q8N1F7 819 aa18.64■□□□□ 0.57
DDX39A-206ENST00000587730 SPATA6LQ8N4H0 392 aa18.64■□□□□ 0.57
DDX39A-206ENST00000587730 TERB1Q8NA31 727 aa18.64■□□□□ 0.57
DDX39A-206ENST00000587730 SLCO4A1Q96BD0 722 aa18.64■□□□□ 0.57
DDX39A-206ENST00000587730 PPWD1Q96BP3 646 aaKnown RBP18.64■□□□□ 0.57
DDX39A-206ENST00000587730 IMP4Q96G21 291 aaKnown RBP18.64■□□□□ 0.57
DDX39A-206ENST00000587730 OLFM1Q99784 485 aa18.64■□□□□ 0.57
DDX39A-206ENST00000587730 PCDHAC1Q9H158 963 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms