RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 NAT16Q8N8M0 369 aa10.24□□□□□ -0.77
APOC1-201ENST00000586638 GDAP1Q8TB36 358 aa10.24□□□□□ -0.77
APOC1-201ENST00000586638 BLOC1S5Q8TDH9 187 aa10.24□□□□□ -0.77
APOC1-201ENST00000586638 PTCD2Q8WV60 388 aaKnown RBP10.24□□□□□ -0.77
APOC1-201ENST00000586638 FGF13Q92913 245 aa10.24□□□□□ -0.77
APOC1-201ENST00000586638 OTUB2Q96DC9 234 aa10.24□□□□□ -0.77
APOC1-201ENST00000586638 ATXN7L3BQ96GX2 97 aa10.24□□□□□ -0.77
APOC1-201ENST00000586638 MYO19Q96H55 970 aa10.24□□□□□ -0.77
APOC1-201ENST00000586638 ZFYVE19Q96K21 471 aa10.24□□□□□ -0.77
APOC1-201ENST00000586638 RPL10LQ96L21 214 aaKnown RBP10.24□□□□□ -0.77
APOC1-201ENST00000586638 AGAP2Q99490 1192 aa10.24□□□□□ -0.77
APOC1-201ENST00000586638 TNKS2Q9H2K2 1166 aa10.24□□□□□ -0.77
APOC1-201ENST00000586638 TREX1Q9NSU2 369 aa10.24□□□□□ -0.77
APOC1-201ENST00000586638 PCMTD2Q9NV79 361 aa10.24□□□□□ -0.77
APOC1-201ENST00000586638 DUS2Q9NX74 493 aaKnown RBP10.24□□□□□ -0.77
APOC1-201ENST00000586638 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.24□□□□□ -0.77
APOC1-201ENST00000586638 MARK1Q9P0L2 795 aa10.24□□□□□ -0.77
APOC1-201ENST00000586638 SENP1Q9P0U3 644 aa10.24□□□□□ -0.77
APOC1-201ENST00000586638 EVLQ9UI08 416 aaPredicted RBP10.24□□□□□ -0.77
APOC1-201ENST00000586638 GGT7Q9UJ14 662 aa10.24□□□□□ -0.77
APOC1-201ENST00000586638 SLC25A13Q9UJS0 675 aa10.24□□□□□ -0.77
APOC1-201ENST00000586638 PCDHGC4Q9Y5F7 938 aa10.24□□□□□ -0.77
APOC1-201ENST00000586638 SPO11Q9Y5K1 396 aa10.24□□□□□ -0.77
APOC1-201ENST00000586638 RAI2Q9Y5P3 530 aa10.24□□□□□ -0.77
APOC1-201ENST00000586638 GVINP1Q7Z2Y8 2422 aa10.24□□□□□ -0.77
APOC1-201ENST00000586638 CFAP47Q6ZTR5 3102 aa10.23□□□□□ -0.77
APOC1-201ENST00000586638 ACACBO00763 2458 aa10.23□□□□□ -0.77
APOC1-201ENST00000586638 MAGEB16A2A368 324 aa10.23□□□□□ -0.77
APOC1-201ENST00000586638 HMX2A2RU54 273 aa10.23□□□□□ -0.77
APOC1-201ENST00000586638 HEPACAM2A8MVW5 462 aa10.23□□□□□ -0.77
APOC1-201ENST00000586638 SLC9A3R1O14745 358 aaPredicted RBP10.23□□□□□ -0.77
APOC1-201ENST00000586638 BUD23O43709 281 aaKnown RBP10.23□□□□□ -0.77
APOC1-201ENST00000586638 KRT37O76014 449 aa10.23□□□□□ -0.77
APOC1-201ENST00000586638 KRT38O76015 456 aa10.23□□□□□ -0.77
APOC1-201ENST00000586638 PRLP01236 227 aa10.23□□□□□ -0.77
APOC1-201ENST00000586638 PDHA1P08559 390 aa10.23□□□□□ -0.77
APOC1-201ENST00000586638 SNRPAP09012 282 aaKnown RBP10.23□□□□□ -0.77
APOC1-201ENST00000586638 ADH5P11766 374 aa10.23□□□□□ -0.77
APOC1-201ENST00000586638 WEE1P30291 646 aa10.23□□□□□ -0.77
APOC1-201ENST00000586638 GKP32189 559 aa10.23□□□□□ -0.77
APOC1-201ENST00000586638 LSP1P33241 339 aa10.23□□□□□ -0.77
APOC1-201ENST00000586638 GP5P40197 560 aa10.23□□□□□ -0.77
APOC1-201ENST00000586638 TMPRSS15P98073 1019 aa10.23□□□□□ -0.77
APOC1-201ENST00000586638 MPP1Q00013 466 aa10.23□□□□□ -0.77
APOC1-201ENST00000586638 SLC12A1Q13621 1099 aa10.23□□□□□ -0.77
APOC1-201ENST00000586638 PUM1Q14671 1186 aaKnown RBP eCLIP10.23□□□□□ -0.77
APOC1-201ENST00000586638 DHCR24Q15392 516 aa10.23□□□□□ -0.77
APOC1-201ENST00000586638 CNGA3Q16281 694 aa10.23□□□□□ -0.77
APOC1-201ENST00000586638 MROH9Q5TGP6 573 aa10.23□□□□□ -0.77
APOC1-201ENST00000586638 MBLAC2Q68D91 279 aa10.23□□□□□ -0.77
APOC1-201ENST00000586638 CYS1Q717R9 158 aa10.23□□□□□ -0.77
APOC1-201ENST00000586638 STRA8Q7Z7C7 330 aa10.23□□□□□ -0.77
APOC1-201ENST00000586638 RYBPQ8N488 228 aaPredicted RBP10.23□□□□□ -0.77
APOC1-201ENST00000586638 OR13J1Q8NGT2 312 aa10.23□□□□□ -0.77
APOC1-201ENST00000586638 BPIFB1Q8TDL5 484 aa10.23□□□□□ -0.77
APOC1-201ENST00000586638 PDCD6IPQ8WUM4 868 aaKnown RBP10.23□□□□□ -0.77
APOC1-201ENST00000586638 OSCP1Q8WVF1 389 aa10.23□□□□□ -0.77
APOC1-201ENST00000586638 SMARCD2Q92925 531 aa10.23□□□□□ -0.77
APOC1-201ENST00000586638 ACDQ96AP0 544 aa10.23□□□□□ -0.77
APOC1-201ENST00000586638 APOPT1Q96IL0 206 aa10.23□□□□□ -0.77
APOC1-201ENST00000586638 SHDQ96IW2 340 aa10.23□□□□□ -0.77
APOC1-201ENST00000586638 DNAJC1Q96KC8 554 aaKnown RBP10.23□□□□□ -0.77
APOC1-201ENST00000586638 RBBP8Q99708 897 aa10.23□□□□□ -0.77
APOC1-201ENST00000586638 CPNE1Q99829 537 aa10.23□□□□□ -0.77
APOC1-201ENST00000586638 C12orf65Q9H3J6 166 aaKnown RBP10.23□□□□□ -0.77
APOC1-201ENST00000586638 ARHGEF3Q9NR81 526 aa10.23□□□□□ -0.77
APOC1-201ENST00000586638 INTS9Q9NV88 658 aaKnown RBP10.23□□□□□ -0.77
APOC1-201ENST00000586638 NKIRAS1Q9NYS0 192 aa10.23□□□□□ -0.77
APOC1-201ENST00000586638 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.23□□□□□ -0.77
APOC1-201ENST00000586638 ARL5AQ9Y689 179 aa10.23□□□□□ -0.77
APOC1-201ENST00000586638 VPS13AQ96RL7 3174 aa10.23□□□□□ -0.77
APOC1-201ENST00000586638 NCOR2Q9Y618 2525 aa10.23□□□□□ -0.77
APOC1-201ENST00000586638 MED19A0JLT2 244 aaPredicted RBP10.22□□□□□ -0.77
APOC1-201ENST00000586638 OR51F1A6NGY5 319 aa10.22□□□□□ -0.77
APOC1-201ENST00000586638 FAM47DPA6NHR8 397 aa10.22□□□□□ -0.77
APOC1-201ENST00000586638 ANHXE9PGG2 379 aa10.22□□□□□ -0.77
APOC1-201ENST00000586638 PRPF4O43172 522 aaKnown RBP eCLIP10.22□□□□□ -0.771e-8■■■■■ 28.4
APOC1-201ENST00000586638 LDB2O43679 373 aa10.22□□□□□ -0.77
APOC1-201ENST00000586638 TYROBPO43914 113 aa10.22□□□□□ -0.77
APOC1-201ENST00000586638 BNIP3LO60238 219 aa10.22□□□□□ -0.77
APOC1-201ENST00000586638 ZNF821O75541 412 aaPredicted RBP10.22□□□□□ -0.77
APOC1-201ENST00000586638 VAPBO95292 243 aa10.22□□□□□ -0.77
APOC1-201ENST00000586638 IGSF6O95976 241 aa10.22□□□□□ -0.77
APOC1-201ENST00000586638 ITGA2BP08514 1039 aa10.22□□□□□ -0.77
APOC1-201ENST00000586638 PYGBP11216 843 aa10.22□□□□□ -0.77
APOC1-201ENST00000586638 KRT4P19013 534 aa10.22□□□□□ -0.77
APOC1-201ENST00000586638 PAMP19021 973 aa10.22□□□□□ -0.77
APOC1-201ENST00000586638 CA4P22748 312 aa10.22□□□□□ -0.77
APOC1-201ENST00000586638 CES1P23141 567 aa10.22□□□□□ -0.77
APOC1-201ENST00000586638 SLC1A2P43004 574 aa10.22□□□□□ -0.77
APOC1-201ENST00000586638 ARCN1P48444 511 aaKnown RBP10.22□□□□□ -0.77
APOC1-201ENST00000586638 ARSDP51689 593 aa10.22□□□□□ -0.77
APOC1-201ENST00000586638 NEK3P51956 506 aa10.22□□□□□ -0.77
APOC1-201ENST00000586638 LIMK2P53671 638 aa10.22□□□□□ -0.77
APOC1-201ENST00000586638 AP1S1P61966 158 aa10.22□□□□□ -0.77
APOC1-201ENST00000586638 SLC18A2Q05940 514 aa10.22□□□□□ -0.77
APOC1-201ENST00000586638 KDSRQ06136 332 aa10.22□□□□□ -0.77
APOC1-201ENST00000586638 GRM2Q14416 872 aa10.22□□□□□ -0.77
APOC1-201ENST00000586638 PTPRCAPQ14761 206 aa10.22□□□□□ -0.77
APOC1-201ENST00000586638 PTPRRQ15256 657 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms