RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 NVLO15381 856 aaKnown RBP12.5□□□□□ -0.41
SMARCA4-208ENST00000585799 NDST3O95803 873 aa12.5□□□□□ -0.41
SMARCA4-208ENST00000585799 OAS1P00973 400 aaKnown RBP12.5□□□□□ -0.41
SMARCA4-208ENST00000585799 MC4RP32245 332 aa12.5□□□□□ -0.41
SMARCA4-208ENST00000585799 IDH3AP50213 366 aa12.5□□□□□ -0.41
SMARCA4-208ENST00000585799 CYLC2Q14093 348 aaPredicted RBP12.5□□□□□ -0.41
SMARCA4-208ENST00000585799 TRIP10Q15642 601 aa12.5□□□□□ -0.41
SMARCA4-208ENST00000585799 INSCQ1MX18 579 aa12.5□□□□□ -0.41
SMARCA4-208ENST00000585799 STEAP4Q687X5 459 aa12.5□□□□□ -0.41
SMARCA4-208ENST00000585799 MBLAC2Q68D91 279 aa12.5□□□□□ -0.41
SMARCA4-208ENST00000585799 ITIH5Q86UX2 942 aa12.5□□□□□ -0.41
SMARCA4-208ENST00000585799 HS6ST3Q8IZP7 471 aa12.5□□□□□ -0.41
SMARCA4-208ENST00000585799 LRGUKQ96M69 825 aa12.5□□□□□ -0.41
SMARCA4-208ENST00000585799 IL12RB2Q99665 862 aa12.5□□□□□ -0.41
SMARCA4-208ENST00000585799 MARCH4Q9P2E8 410 aaPredicted RBP12.5□□□□□ -0.41
SMARCA4-208ENST00000585799 FKBPLQ9UIM3 349 aa12.5□□□□□ -0.41
SMARCA4-208ENST00000585799 TGDSO95455 350 aa12.5□□□□□ -0.41
SMARCA4-208ENST00000585799 HLA-DPA1P20036 260 aa12.5□□□□□ -0.41
SMARCA4-208ENST00000585799 PPARGP37231 505 aaPredicted RBP12.5□□□□□ -0.41
SMARCA4-208ENST00000585799 NNMTP40261 264 aa12.5□□□□□ -0.41
SMARCA4-208ENST00000585799 BCL2L1Q07817 233 aa12.5□□□□□ -0.41
SMARCA4-208ENST00000585799 DBN1Q16643 649 aa12.5□□□□□ -0.41
SMARCA4-208ENST00000585799 TRIM71Q2Q1W2 868 aaKnown RBP12.5□□□□□ -0.41
SMARCA4-208ENST00000585799 ARMC12Q5T9G4 340 aa12.5□□□□□ -0.41
SMARCA4-208ENST00000585799 FBXO39Q8N4B4 442 aa12.5□□□□□ -0.41
SMARCA4-208ENST00000585799 DIS3LQ8TF46 1054 aaKnown RBP12.5□□□□□ -0.41
SMARCA4-208ENST00000585799 CDRT15Q96T59 188 aa12.5□□□□□ -0.41
SMARCA4-208ENST00000585799 KIFC1Q9BW19 673 aa12.5□□□□□ -0.41
SMARCA4-208ENST00000585799 MRPL1Q9BYD6 325 aaKnown RBP12.5□□□□□ -0.41
SMARCA4-208ENST00000585799 CLPBQ9H078 707 aa12.5□□□□□ -0.41
SMARCA4-208ENST00000585799 RAP2CQ9Y3L5 183 aa12.5□□□□□ -0.41
SMARCA4-208ENST00000585799 SQORQ9Y6N5 450 aa12.5□□□□□ -0.41
SMARCA4-208ENST00000585799 V9GYQ6 96 aa12.5□□□□□ -0.41
SMARCA4-208ENST00000585799 ZBTB14O43829 449 aa12.49□□□□□ -0.41
SMARCA4-208ENST00000585799 SERPINA6P08185 405 aa12.49□□□□□ -0.41
SMARCA4-208ENST00000585799 TPBGLP0DKB5 382 aa12.49□□□□□ -0.41
SMARCA4-208ENST00000585799 MAGEA11P43364 429 aa12.49□□□□□ -0.41
SMARCA4-208ENST00000585799 RPL34P49207 117 aaKnown RBP12.49□□□□□ -0.41
SMARCA4-208ENST00000585799 POU4F1Q01851 419 aa12.49□□□□□ -0.41
SMARCA4-208ENST00000585799 BTKQ06187 659 aa12.49□□□□□ -0.41
SMARCA4-208ENST00000585799 LAMB3Q13751 1172 aa12.49□□□□□ -0.41
SMARCA4-208ENST00000585799 LHX8Q68G74 356 aa12.49□□□□□ -0.41
SMARCA4-208ENST00000585799 MSANTD2Q6P1R3 559 aa12.49□□□□□ -0.41
SMARCA4-208ENST00000585799 RPAINQ86UA6 219 aa12.49□□□□□ -0.41
SMARCA4-208ENST00000585799 CAMK1DQ8IU85 385 aa12.49□□□□□ -0.41
SMARCA4-208ENST00000585799 ZNF461Q8TAF7 563 aa12.49□□□□□ -0.41
SMARCA4-208ENST00000585799 HBEGFQ99075 208 aa12.49□□□□□ -0.41
SMARCA4-208ENST00000585799 MRPL57Q9BQC6 102 aaKnown RBP12.49□□□□□ -0.41
SMARCA4-208ENST00000585799 PIF1Q9H611 641 aa12.49□□□□□ -0.41
SMARCA4-208ENST00000585799 DCLRE1BQ9H816 532 aa12.49□□□□□ -0.41
SMARCA4-208ENST00000585799 RNPEPL1Q9HAU8 725 aa12.49□□□□□ -0.41
SMARCA4-208ENST00000585799 ANKRD12Q6UB98 2062 aa12.49□□□□□ -0.41
SMARCA4-208ENST00000585799 C1orf232A0A0U1RR37 186 aa12.49□□□□□ -0.41
SMARCA4-208ENST00000585799 A0A1B0GVM2 712 aa12.49□□□□□ -0.41
SMARCA4-208ENST00000585799 TCAF2A6NFQ2 919 aa12.49□□□□□ -0.41
SMARCA4-208ENST00000585799 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.49□□□□□ -0.41
SMARCA4-208ENST00000585799 MGRN1O60291 552 aa12.49□□□□□ -0.41
SMARCA4-208ENST00000585799 DLX3O60479 287 aa12.49□□□□□ -0.41
SMARCA4-208ENST00000585799 PTPRRQ15256 657 aa12.49□□□□□ -0.41
SMARCA4-208ENST00000585799 KHDC1Q4VXA5 237 aaKnown RBP12.49□□□□□ -0.41
SMARCA4-208ENST00000585799 KIAA0930Q6ICG6 404 aaPredicted RBP12.49□□□□□ -0.41
SMARCA4-208ENST00000585799 CD300LGQ6UXG3 332 aa12.49□□□□□ -0.41
SMARCA4-208ENST00000585799 FIBCD1Q8N539 461 aa12.49□□□□□ -0.41
SMARCA4-208ENST00000585799 DNAJC9Q8WXX5 260 aa12.49□□□□□ -0.41
SMARCA4-208ENST00000585799 TMEM248Q9NWD8 314 aa12.49□□□□□ -0.41
SMARCA4-208ENST00000585799 MARCH5Q9NX47 278 aa12.49□□□□□ -0.41
SMARCA4-208ENST00000585799 UBDO15205 165 aa12.49□□□□□ -0.41
SMARCA4-208ENST00000585799 TPST1O60507 370 aa12.49□□□□□ -0.41
SMARCA4-208ENST00000585799 SIX3O95343 332 aaPredicted RBP12.49□□□□□ -0.41
SMARCA4-208ENST00000585799 ALPIP09923 528 aa12.49□□□□□ -0.41
SMARCA4-208ENST00000585799 THRAP10827 490 aa12.49□□□□□ -0.41
SMARCA4-208ENST00000585799 MZF1P28698 734 aaPredicted RBP12.49□□□□□ -0.41
SMARCA4-208ENST00000585799 HOXC8P31273 242 aa12.49□□□□□ -0.41
SMARCA4-208ENST00000585799 CCDC15Q0P6D6 951 aa12.49□□□□□ -0.41
SMARCA4-208ENST00000585799 SERINC3Q13530 473 aa12.49□□□□□ -0.41
SMARCA4-208ENST00000585799 PHTF2Q8N3S3 785 aa12.49□□□□□ -0.41
SMARCA4-208ENST00000585799 LENG8Q96PV6 779 aaPredicted RBP12.49□□□□□ -0.41
SMARCA4-208ENST00000585799 ZDHHC6Q9H6R6 413 aa12.49□□□□□ -0.41
SMARCA4-208ENST00000585799 ASB8Q9H765 288 aa12.49□□□□□ -0.41
SMARCA4-208ENST00000585799 CERS4Q9HA82 394 aa12.49□□□□□ -0.41
SMARCA4-208ENST00000585799 INSIG1O15503 277 aa12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 COX4I1P13073 169 aa12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 LPOP22079 712 aaPredicted RBP12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 CTNNB1P35222 781 aa12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 CDH4P55283 916 aa12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 DEFB103AP81534 67 aa12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 FOXD4Q12950 439 aaPredicted RBP12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 PPM1LQ5SGD2 360 aa12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 FAM126BQ8IXS8 530 aa12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 RCN3Q96D15 328 aa12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 GPR21Q99679 349 aa12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 GPR22Q99680 433 aa12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 MAGEH1Q9H213 219 aa12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 SUN2Q9UH99 717 aa12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 SHROOM3Q8TF72 1996 aa12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 WDR90Q96KV7 1748 aa12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 A0A087X1B8 175 aa12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 TRPC5OSA6NMA1 111 aa12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 NR5A2O00482 541 aa12.48□□□□□ -0.41
SMARCA4-208ENST00000585799 SEC24AO95486 1093 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms