RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 C3orf70A6NLC5 250 aaPredicted RBP9.95□□□□□ -0.82
SKA2-208ENST00000583927 PSMD11O00231 422 aa9.95□□□□□ -0.82
SKA2-208ENST00000583927 TPP1O14773 563 aa9.95□□□□□ -0.82
SKA2-208ENST00000583927 FZD6O60353 706 aa9.95□□□□□ -0.82
SKA2-208ENST00000583927 ALPPL2P10696 532 aa9.95□□□□□ -0.82
SKA2-208ENST00000583927 ZFXP17010 805 aaPredicted RBP9.95□□□□□ -0.82
SKA2-208ENST00000583927 ITIH2P19823 946 aa9.95□□□□□ -0.82
SKA2-208ENST00000583927 TRIM23P36406 574 aa9.95□□□□□ -0.82
SKA2-208ENST00000583927 LIG3P49916 1009 aa9.95□□□□□ -0.82
SKA2-208ENST00000583927 RALGDSQ12967 914 aa9.95□□□□□ -0.82
SKA2-208ENST00000583927 MTM1Q13496 603 aa9.95□□□□□ -0.82
SKA2-208ENST00000583927 PDE1CQ14123 709 aaPredicted RBP9.95□□□□□ -0.82
SKA2-208ENST00000583927 TAZQ16635 292 aa9.95□□□□□ -0.82
SKA2-208ENST00000583927 WSCD2Q2TBF2 565 aa9.95□□□□□ -0.82
SKA2-208ENST00000583927 HS1BP3Q53T59 392 aa9.95□□□□□ -0.82
SKA2-208ENST00000583927 LRRC73Q5JTD7 316 aa9.95□□□□□ -0.82
SKA2-208ENST00000583927 SLC9A4Q6AI14 798 aa9.95□□□□□ -0.82
SKA2-208ENST00000583927 TMPRSS12Q86WS5 348 aa9.95□□□□□ -0.82
SKA2-208ENST00000583927 CPNE8Q86YQ8 564 aa9.95□□□□□ -0.82
SKA2-208ENST00000583927 RAPGEF5Q92565 580 aa9.95□□□□□ -0.82
SKA2-208ENST00000583927 MCCC1Q96RQ3 725 aaPredicted RBP9.95□□□□□ -0.82
SKA2-208ENST00000583927 WRAP53Q9BUR4 548 aaKnown RBP9.95□□□□□ -0.82
SKA2-208ENST00000583927 POLR1EQ9GZS1 481 aaKnown RBP9.95□□□□□ -0.82
SKA2-208ENST00000583927 NOD2Q9HC29 1040 aa9.95□□□□□ -0.82
SKA2-208ENST00000583927 LUC7LQ9NQ29 371 aaKnown RBP9.95□□□□□ -0.82
SKA2-208ENST00000583927 SCUBE2Q9NQ36 999 aa9.95□□□□□ -0.82
SKA2-208ENST00000583927 MBNL1Q9NR56 388 aaKnown RBP9.95□□□□□ -0.82
SKA2-208ENST00000583927 DDX56Q9NY93 547 aaKnown RBP9.95□□□□□ -0.82
SKA2-208ENST00000583927 DTLQ9NZJ0 730 aa9.95□□□□□ -0.82
SKA2-208ENST00000583927 NCKIPSDQ9NZQ3 722 aa9.95□□□□□ -0.82
SKA2-208ENST00000583927 DKK4Q9UBT3 224 aa9.95□□□□□ -0.82
SKA2-208ENST00000583927 URB1O60287 2271 aaKnown RBP9.95□□□□□ -0.82
SKA2-208ENST00000583927 ITPR1Q14643 2758 aa9.94□□□□□ -0.82
SKA2-208ENST00000583927 TRIM38O00635 465 aa9.94□□□□□ -0.82
SKA2-208ENST00000583927 PSTPIP1O43586 416 aa9.94□□□□□ -0.82
SKA2-208ENST00000583927 RFPL3O75679 317 aa9.94□□□□□ -0.82
SKA2-208ENST00000583927 PGLSO95336 258 aa9.94□□□□□ -0.82
SKA2-208ENST00000583927 GP1BAP07359 652 aa9.94□□□□□ -0.82
SKA2-208ENST00000583927 ELFN1P0C7U0 828 aa9.94□□□□□ -0.82
SKA2-208ENST00000583927 CKMT1AP12532 417 aa9.94□□□□□ -0.82
SKA2-208ENST00000583927 SPINK2P20155 84 aa9.94□□□□□ -0.82
SKA2-208ENST00000583927 CYLC1P35663 651 aaPredicted RBP9.94□□□□□ -0.82
SKA2-208ENST00000583927 MAGEA1P43355 309 aa9.94□□□□□ -0.82
SKA2-208ENST00000583927 BLKP51451 505 aa9.94□□□□□ -0.82
SKA2-208ENST00000583927 ZNF75DP51815 510 aa9.94□□□□□ -0.82
SKA2-208ENST00000583927 THOP1P52888 689 aa9.94□□□□□ -0.82
SKA2-208ENST00000583927 PPIDQ08752 370 aaKnown RBP9.94□□□□□ -0.82
SKA2-208ENST00000583927 SLC10A2Q12908 348 aaPredicted RBP9.94□□□□□ -0.82
SKA2-208ENST00000583927 EIF2B5Q13144 721 aaKnown RBP9.94□□□□□ -0.82
SKA2-208ENST00000583927 IRF4Q15306 451 aa9.94□□□□□ -0.82
SKA2-208ENST00000583927 ESRP1Q6NXG1 681 aaKnown RBP9.94□□□□□ -0.82
SKA2-208ENST00000583927 NLRP8Q86W28 1048 aa9.94□□□□□ -0.82
SKA2-208ENST00000583927 TMTC1Q8IUR5 882 aa9.94□□□□□ -0.82
SKA2-208ENST00000583927 RHOT1Q8IXI2 618 aa9.94□□□□□ -0.82
SKA2-208ENST00000583927 PLD5Q8N7P1 536 aa9.94□□□□□ -0.82
SKA2-208ENST00000583927 PNPLA1Q8N8W4 532 aa9.94□□□□□ -0.82
SKA2-208ENST00000583927 ZNF548Q8NEK5 533 aaPredicted RBP9.94□□□□□ -0.82
SKA2-208ENST00000583927 ATL2Q8NHH9 583 aa9.94□□□□□ -0.82
SKA2-208ENST00000583927 SCRN2Q96FV2 425 aa9.94□□□□□ -0.82
SKA2-208ENST00000583927 BRD8Q9H0E9 1235 aa9.94□□□□□ -0.82
SKA2-208ENST00000583927 RBSNQ9H1K0 784 aa9.94□□□□□ -0.82
SKA2-208ENST00000583927 EVA1BQ9NVM1 165 aa9.94□□□□□ -0.82
SKA2-208ENST00000583927 UCKL1Q9NWZ5 548 aa9.94□□□□□ -0.82
SKA2-208ENST00000583927 DNAJC28Q9NX36 388 aa9.94□□□□□ -0.82
SKA2-208ENST00000583927 KLF15Q9UIH9 416 aa9.94□□□□□ -0.82
SKA2-208ENST00000583927 SALL4Q9UJQ4 1053 aa9.94□□□□□ -0.82
SKA2-208ENST00000583927 PCDHGC4Q9Y5F7 938 aa9.94□□□□□ -0.82
SKA2-208ENST00000583927 KIF26BQ2KJY2 2108 aa9.94□□□□□ -0.82
SKA2-208ENST00000583927 BTNL10A8MVZ5 291 aa9.93□□□□□ -0.82
SKA2-208ENST00000583927 C1QTNF9BB2RNN3 333 aa9.93□□□□□ -0.82
SKA2-208ENST00000583927 LMO7DNF2Z398 122 aa9.93□□□□□ -0.82
SKA2-208ENST00000583927 TNFRSF10CO14798 259 aa9.93□□□□□ -0.82
SKA2-208ENST00000583927 AQP9O43315 295 aa9.93□□□□□ -0.82
SKA2-208ENST00000583927 SIGLEC6O43699 453 aa9.93□□□□□ -0.82
SKA2-208ENST00000583927 LZTS3O60299 673 aaPredicted RBP9.93□□□□□ -0.82
SKA2-208ENST00000583927 SDC3O75056 442 aa9.93□□□□□ -0.82
SKA2-208ENST00000583927 RECQL5O94762 991 aaPredicted RBP9.93□□□□□ -0.82
SKA2-208ENST00000583927 CPP00450 1065 aa9.93□□□□□ -0.82
SKA2-208ENST00000583927 C1QTNF9P0C862 333 aa9.93□□□□□ -0.82
SKA2-208ENST00000583927 ATXN8OSP0DMR3 200 aa9.93□□□□□ -0.82
SKA2-208ENST00000583927 CYP2A6P11509 494 aaPredicted RBP9.93□□□□□ -0.82
SKA2-208ENST00000583927 KRT10P13645 584 aa9.93□□□□□ -0.82
SKA2-208ENST00000583927 CCNB1P14635 433 aa9.93□□□□□ -0.82
SKA2-208ENST00000583927 JUNDP17535 347 aa9.93□□□□□ -0.82
SKA2-208ENST00000583927 GM2AP17900 193 aa9.93□□□□□ -0.82
SKA2-208ENST00000583927 HTR1BP28222 390 aa9.93□□□□□ -0.82
SKA2-208ENST00000583927 TEAD1P28347 426 aa9.93□□□□□ -0.82
SKA2-208ENST00000583927 VIPR1P32241 457 aa9.93□□□□□ -0.82
SKA2-208ENST00000583927 GJC1P36383 396 aa9.93□□□□□ -0.82
SKA2-208ENST00000583927 NR2C2P49116 596 aa9.93□□□□□ -0.82
SKA2-208ENST00000583927 DUSP3P51452 185 aaPredicted RBP9.93□□□□□ -0.82
SKA2-208ENST00000583927 KIAA1024LP59773 190 aa9.93□□□□□ -0.82
SKA2-208ENST00000583927 RPL26P61254 145 aaKnown RBP9.93□□□□□ -0.82
SKA2-208ENST00000583927 IFI35P80217 286 aaPredicted RBP9.93□□□□□ -0.82
SKA2-208ENST00000583927 E2F1Q01094 437 aa9.93□□□□□ -0.82
SKA2-208ENST00000583927 GBE1Q04446 702 aa9.93□□□□□ -0.82
SKA2-208ENST00000583927 TRAF2Q12933 501 aa9.93□□□□□ -0.82
SKA2-208ENST00000583927 DNAJC3Q13217 504 aa9.93□□□□□ -0.82
SKA2-208ENST00000583927 CAMK2BQ13554 666 aa9.93□□□□□ -0.82
SKA2-208ENST00000583927 INPP5AQ14642 412 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms