RNA–Protein interactions for RNA: ENST00000577228.1

CDH8-202, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-202ENST00000577228 KIAA1024LP59773 190 aa11.88□□□□□ -0.51
CDH8-202ENST00000577228 SRSF6Q13247 344 aaKnown RBP11.88□□□□□ -0.51
CDH8-202ENST00000577228 SYCP1Q15431 976 aa11.88□□□□□ -0.51
CDH8-202ENST00000577228 FKBP15Q5T1M5 1219 aa11.88□□□□□ -0.51
CDH8-202ENST00000577228 CERCAMQ5T4B2 595 aa11.88□□□□□ -0.51
CDH8-202ENST00000577228 DNAJC24Q6P3W2 148 aa11.88□□□□□ -0.51
CDH8-202ENST00000577228 TAF8Q7Z7C8 310 aa11.88□□□□□ -0.51
CDH8-202ENST00000577228 ZSWIM9Q86XI8 627 aa11.88□□□□□ -0.51
CDH8-202ENST00000577228 CAMK1DQ8IU85 385 aa11.88□□□□□ -0.51
CDH8-202ENST00000577228 PAF1Q8N7H5 531 aa11.88□□□□□ -0.51
CDH8-202ENST00000577228 PLA2G15Q8NCC3 412 aa11.88□□□□□ -0.51
CDH8-202ENST00000577228 FAM46DQ8NEK8 389 aa11.88□□□□□ -0.51
CDH8-202ENST00000577228 OR56A4Q8NGH8 313 aa11.88□□□□□ -0.51
CDH8-202ENST00000577228 TMEM159Q96B96 161 aa11.88□□□□□ -0.51
CDH8-202ENST00000577228 MCEEQ96PE7 176 aa11.88□□□□□ -0.51
CDH8-202ENST00000577228 ARHGAP9Q9BRR9 750 aa11.88□□□□□ -0.51
CDH8-202ENST00000577228 FAM117AQ9C073 453 aa11.88□□□□□ -0.51
CDH8-202ENST00000577228 VPS16Q9H269 839 aa11.88□□□□□ -0.51
CDH8-202ENST00000577228 ATP13A3Q9H7F0 1226 aa11.88□□□□□ -0.51
CDH8-202ENST00000577228 PDFQ9HBH1 243 aa11.88□□□□□ -0.51
CDH8-202ENST00000577228 FGF22Q9HCT0 170 aa11.88□□□□□ -0.51
CDH8-202ENST00000577228 SEPT11Q9NVA2 429 aaKnown RBP11.88□□□□□ -0.51
CDH8-202ENST00000577228 SEPT10Q9P0V9 454 aa11.88□□□□□ -0.51
CDH8-202ENST00000577228 APPL1Q9UKG1 709 aa11.88□□□□□ -0.51
CDH8-202ENST00000577228 LRRK1Q38SD2 2015 aa11.87□□□□□ -0.51
CDH8-202ENST00000577228 CFAP69A5D8W1 941 aa11.87□□□□□ -0.51
CDH8-202ENST00000577228 TMEM202A6NGA9 273 aa11.87□□□□□ -0.51
CDH8-202ENST00000577228 B4DGG1 531 aa11.87□□□□□ -0.51
CDH8-202ENST00000577228 J3KR12 359 aa11.87□□□□□ -0.51
CDH8-202ENST00000577228 BUB1BO60566 1050 aaPredicted RBP11.87□□□□□ -0.51
CDH8-202ENST00000577228 PRAMEF11O60813 436 aa11.87□□□□□ -0.51
CDH8-202ENST00000577228 RECQL5O94762 991 aaPredicted RBP11.87□□□□□ -0.51
CDH8-202ENST00000577228 ITGB2P05107 769 aa11.87□□□□□ -0.51
CDH8-202ENST00000577228 DESP17661 470 aa11.87□□□□□ -0.51
CDH8-202ENST00000577228 ITIH1P19827 911 aa11.87□□□□□ -0.51
CDH8-202ENST00000577228 KELP23276 732 aa11.87□□□□□ -0.51
CDH8-202ENST00000577228 SERPINA4P29622 427 aa11.87□□□□□ -0.51
CDH8-202ENST00000577228 HTR7P34969 479 aa11.87□□□□□ -0.51
CDH8-202ENST00000577228 TPI1P60174 286 aa11.87□□□□□ -0.51
CDH8-202ENST00000577228 ZFP36L1Q07352 338 aaKnown RBP11.87□□□□□ -0.51
CDH8-202ENST00000577228 ARHGEF7Q14155 803 aa11.87□□□□□ -0.51
CDH8-202ENST00000577228 KRT31Q15323 416 aa11.87□□□□□ -0.51
CDH8-202ENST00000577228 LINC00303Q3SY05 128 aa11.87□□□□□ -0.51
CDH8-202ENST00000577228 C14orf28Q4W4Y0 310 aa11.87□□□□□ -0.51
CDH8-202ENST00000577228 CT47A1Q5JQC4 288 aaPredicted RBP11.87□□□□□ -0.51
CDH8-202ENST00000577228 MANEAQ5SRI9 462 aa11.87□□□□□ -0.51
CDH8-202ENST00000577228 OGFOD3Q6PK18 319 aa11.87□□□□□ -0.51
CDH8-202ENST00000577228 XKR5Q6UX68 686 aa11.87□□□□□ -0.51
CDH8-202ENST00000577228 MON1BQ7L1V2 547 aa11.87□□□□□ -0.51
CDH8-202ENST00000577228 SPRED1Q7Z699 444 aa11.87□□□□□ -0.51
CDH8-202ENST00000577228 SRLQ86TD4 932 aa11.87□□□□□ -0.51
CDH8-202ENST00000577228 FUBP1Q96AE4 644 aaKnown RBP11.87□□□□□ -0.51
CDH8-202ENST00000577228 CELF6Q96J87 481 aaKnown RBP11.87□□□□□ -0.51
CDH8-202ENST00000577228 CNPY3Q9BT09 278 aa11.87□□□□□ -0.51
CDH8-202ENST00000577228 NUP62CLQ9H1M0 184 aa11.87□□□□□ -0.51
CDH8-202ENST00000577228 LRRC19Q9H756 370 aa11.87□□□□□ -0.51
CDH8-202ENST00000577228 DONSONQ9NYP3 566 aa11.87□□□□□ -0.51
CDH8-202ENST00000577228 RNF215Q9Y6U7 377 aa11.87□□□□□ -0.51
CDH8-202ENST00000577228 SPTA1P02549 2419 aa11.86□□□□□ -0.51
CDH8-202ENST00000577228 PRAMEF33A0A0G2JMD5 474 aa11.86□□□□□ -0.51
CDH8-202ENST00000577228 TCRBV5S1A1TA0A578 114 aa11.86□□□□□ -0.51
CDH8-202ENST00000577228 ARHGAP42A6NI28 874 aa11.86□□□□□ -0.51
CDH8-202ENST00000577228 TNFRSF10CO14798 259 aa11.86□□□□□ -0.51
CDH8-202ENST00000577228 ARHGAP6O43182 974 aa11.86□□□□□ -0.51
CDH8-202ENST00000577228 PRAMEF10O60809 474 aa11.86□□□□□ -0.51
CDH8-202ENST00000577228 ELFN1P0C7U0 828 aa11.86□□□□□ -0.51
CDH8-202ENST00000577228 PNLIPP16233 465 aa11.86□□□□□ -0.51
CDH8-202ENST00000577228 ETV5P41161 510 aa11.86□□□□□ -0.51
CDH8-202ENST00000577228 RGRP47804 291 aa11.86□□□□□ -0.51
CDH8-202ENST00000577228 CSNK1DP48730 415 aa11.86□□□□□ -0.51
CDH8-202ENST00000577228 NDST2P52849 883 aa11.86□□□□□ -0.51
CDH8-202ENST00000577228 MAPK10P53779 464 aa11.86□□□□□ -0.51
CDH8-202ENST00000577228 RPL7AP62424 266 aaKnown RBP11.86□□□□□ -0.51
CDH8-202ENST00000577228 RALGDSQ12967 914 aa11.86□□□□□ -0.51
CDH8-202ENST00000577228 HLTFQ14527 1009 aaKnown RBP eCLIP11.86□□□□□ -0.51
CDH8-202ENST00000577228 MAP9Q49MG5 647 aa11.86□□□□□ -0.51
CDH8-202ENST00000577228 PHF19Q5T6S3 580 aa11.86□□□□□ -0.51
CDH8-202ENST00000577228 SPECC1LQ69YQ0 1117 aa11.86□□□□□ -0.51
CDH8-202ENST00000577228 DPPA4Q7L190 304 aa11.86□□□□□ -0.51
CDH8-202ENST00000577228 VASH2Q86V25 355 aa11.86□□□□□ -0.51
CDH8-202ENST00000577228 ZFAND4Q86XD8 727 aa11.86□□□□□ -0.51
CDH8-202ENST00000577228 SLITRK4Q8IW52 837 aa11.86□□□□□ -0.51
CDH8-202ENST00000577228 SFTPA2Q8IWL1 248 aa11.86□□□□□ -0.51
CDH8-202ENST00000577228 TSEN2Q8NCE0 465 aaKnown RBP11.86□□□□□ -0.51
CDH8-202ENST00000577228 EXTL1Q92935 676 aa11.86□□□□□ -0.51
CDH8-202ENST00000577228 USP7Q93009 1102 aa11.86□□□□□ -0.51
CDH8-202ENST00000577228 PCMTD1Q96MG8 357 aaPredicted RBP11.86□□□□□ -0.51
CDH8-202ENST00000577228 CMKLR1Q99788 373 aa11.86□□□□□ -0.51
CDH8-202ENST00000577228 TRIM4Q9C037 500 aa11.86□□□□□ -0.51
CDH8-202ENST00000577228 TMEM168Q9H0V1 697 aa11.86□□□□□ -0.51
CDH8-202ENST00000577228 DPEP2Q9H4A9 486 aa11.86□□□□□ -0.51
CDH8-202ENST00000577228 WDR26Q9H7D7 661 aa11.86□□□□□ -0.51
CDH8-202ENST00000577228 CYP4F12Q9HCS2 524 aa11.86□□□□□ -0.51
CDH8-202ENST00000577228 MRPL40Q9NQ50 206 aaKnown RBP11.86□□□□□ -0.51
CDH8-202ENST00000577228 GPATCH2LQ9NWQ4 482 aa11.86□□□□□ -0.51
CDH8-202ENST00000577228 FOXJ2Q9P0K8 574 aa11.86□□□□□ -0.51
CDH8-202ENST00000577228 LRIT1Q9P2V4 623 aa11.86□□□□□ -0.51
CDH8-202ENST00000577228 MOSPD1Q9UJG1 213 aa11.86□□□□□ -0.51
CDH8-202ENST00000577228 SIK3Q9Y2K2 1263 aa11.86□□□□□ -0.51
CDH8-202ENST00000577228 PCDHB11Q9Y5F2 797 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms