RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 RWDD4Q6NW29 188 aaKnown RBP9.37□□□□□ -0.91
NPLOC4-210ENST00000572824 SHISA2Q6UWI4 295 aa9.37□□□□□ -0.91
NPLOC4-210ENST00000572824 Q6ZSR6 202 aa9.37□□□□□ -0.91
NPLOC4-210ENST00000572824 DSG4Q86SJ6 1040 aa9.37□□□□□ -0.91
NPLOC4-210ENST00000572824 SETD3Q86TU7 594 aaPredicted RBP9.37□□□□□ -0.91
NPLOC4-210ENST00000572824 TMPRSS12Q86WS5 348 aa9.37□□□□□ -0.91
NPLOC4-210ENST00000572824 SFTPA2Q8IWL1 248 aa9.37□□□□□ -0.91
NPLOC4-210ENST00000572824 GALNT15Q8N3T1 639 aa9.37□□□□□ -0.91
NPLOC4-210ENST00000572824 FAM172AQ8WUF8 416 aa9.37□□□□□ -0.91
NPLOC4-210ENST00000572824 ARHGEF2Q92974 986 aaKnown RBP9.37□□□□□ -0.91
NPLOC4-210ENST00000572824 NAF1Q96HR8 494 aaKnown RBP9.37□□□□□ -0.91
NPLOC4-210ENST00000572824 FAM81BQ96LP2 452 aa9.37□□□□□ -0.91
NPLOC4-210ENST00000572824 NSMCE3Q96MG7 304 aa9.37□□□□□ -0.91
NPLOC4-210ENST00000572824 RSRP1Q9BUV0 290 aa9.37□□□□□ -0.91
NPLOC4-210ENST00000572824 STK33Q9BYT3 514 aa9.37□□□□□ -0.91
NPLOC4-210ENST00000572824 ZYG11BQ9C0D3 744 aa9.37□□□□□ -0.91
NPLOC4-210ENST00000572824 OSBPL2Q9H1P3 480 aa9.37□□□□□ -0.91
NPLOC4-210ENST00000572824 GPR27Q9NS67 375 aa9.37□□□□□ -0.91
NPLOC4-210ENST00000572824 FANCLQ9NW38 375 aa9.37□□□□□ -0.91
NPLOC4-210ENST00000572824 DNAJC28Q9NX36 388 aa9.37□□□□□ -0.91
NPLOC4-210ENST00000572824 TAS2R14Q9NYV8 317 aa9.37□□□□□ -0.91
NPLOC4-210ENST00000572824 DKK4Q9UBT3 224 aa9.37□□□□□ -0.91
NPLOC4-210ENST00000572824 COQ6Q9Y2Z9 468 aa9.37□□□□□ -0.91
NPLOC4-210ENST00000572824 ZNF462Q96JM2 2506 aa9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 A0A087WV48 116 aa9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 LOC100289279A0A1B0GTE1 492 aa9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 TCRBV5S1A1TA0A578 114 aa9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 ILVBLA1L0T0 632 aa9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 C16orf96A6NNT2 1141 aa9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 AGRPO00253 132 aa9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 PIGNO95427 931 aa9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 ECEL1O95672 775 aa9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 LSM8O95777 96 aaKnown RBP9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 MPOP05164 745 aa9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 UNGP13051 313 aaPredicted RBP9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 ATP1A3P13637 1013 aa9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 CKMT2P17540 419 aa9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 HNRNPA2B1P22626 353 aaKnown RBP9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 ITGB7P26010 798 aa9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 RFC1P35251 1148 aaPredicted RBP9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 ADRA1BP35368 520 aa9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 SOX5P35711 763 aa9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 RGRP47804 291 aa9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 NEK3P51956 506 aa9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 COPB1P53618 953 aaKnown RBP9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 RPL7AP62424 266 aaKnown RBP9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 KRT83P78385 493 aa9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 CDR2Q01850 454 aa9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 CCDC173Q0VFZ6 552 aa9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 EIF2B5Q13144 721 aaKnown RBP9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 C1orf61Q13536 156 aa9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 CA9Q16790 459 aa9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 DEFB133Q30KQ1 61 aa9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 INAVAQ3KP66 663 aa9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 SLC45A4Q5BKX6 768 aa9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 CARD16Q5EG05 197 aa9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 LRRC31Q6UY01 552 aa9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 APTXQ7Z2E3 356 aaKnown RBP9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 ABI3BPQ7Z7G0 1075 aa9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 IQCHQ86VS3 1027 aa9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 ZSWIM9Q86XI8 627 aa9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 ZDHHC17Q8IUH5 632 aa9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 FAM114A1Q8IWE2 563 aa9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 TP53INP2Q8IXH6 220 aa9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 RYBPQ8N488 228 aaPredicted RBP9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 ZNF548Q8NEK5 533 aaPredicted RBP9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 TMIEQ8NEW7 156 aa9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 OR4C6Q8NH72 309 aa9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 NXPE2Q96DL1 559 aa9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 HMCESQ96FZ2 354 aa9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 APOLD1Q96LR9 279 aa9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 HAPLN3Q96S86 360 aa9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 HEPHQ9BQS7 1158 aa9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 WRAP53Q9BUR4 548 aaKnown RBP9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 HDAC8Q9BY41 377 aa9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 SLC17A9Q9BYT1 436 aa9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 TRIM7Q9C029 511 aa9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 ERVMER34-1Q9H9K5 563 aa9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 MBNL1Q9NR56 388 aaKnown RBP9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 HECAQ9UBI9 543 aaPredicted RBP9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 LHX3Q9UBR4 397 aa9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 OR12D3Q9UGF7 316 aa9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 DMTF1Q9Y222 760 aa9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 MFHAS1Q9Y4C4 1052 aa9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 PCDHGA1Q9Y5H4 931 aa9.36□□□□□ -0.91
NPLOC4-210ENST00000572824 AHCTF1Q8WYP5 2266 aa9.35□□□□□ -0.91
NPLOC4-210ENST00000572824 UNC13CQ8NB66 2214 aa9.35□□□□□ -0.91
NPLOC4-210ENST00000572824 K7ESM1 405 aa9.35□□□□□ -0.91
NPLOC4-210ENST00000572824 KRIT1O00522 736 aa9.35□□□□□ -0.91
NPLOC4-210ENST00000572824 DFNA5O60443 496 aa9.35□□□□□ -0.91
NPLOC4-210ENST00000572824 GCATO75600 419 aa9.35□□□□□ -0.91
NPLOC4-210ENST00000572824 TMCC1O94876 653 aa9.35□□□□□ -0.91
NPLOC4-210ENST00000572824 WISP1O95388 367 aa9.35□□□□□ -0.91
NPLOC4-210ENST00000572824 MT-CO3P00414 261 aa9.35□□□□□ -0.91
NPLOC4-210ENST00000572824 PRNPP04156 253 aa9.35□□□□□ -0.91
NPLOC4-210ENST00000572824 CTSBP07858 339 aa9.35□□□□□ -0.91
NPLOC4-210ENST00000572824 PLEKP08567 350 aaPredicted RBP9.35□□□□□ -0.91
NPLOC4-210ENST00000572824 TGM2P21980 687 aa9.35□□□□□ -0.91
NPLOC4-210ENST00000572824 ACP1P24666 158 aa9.35□□□□□ -0.91
NPLOC4-210ENST00000572824 L1CAMP32004 1257 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms