RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 TRIM51Q9BSJ1 452 aa13.9□□□□□ -0.19
RPAIN-209ENST00000571558 C2orf49Q9BVC5 232 aaPredicted RBP13.9□□□□□ -0.19
RPAIN-209ENST00000571558 BTBD1Q9H0C5 482 aa13.9□□□□□ -0.19
RPAIN-209ENST00000571558 C6orf106Q9H6K1 298 aaPredicted RBP13.9□□□□□ -0.19
RPAIN-209ENST00000571558 PCDH9Q9HC56 1237 aa13.9□□□□□ -0.19
RPAIN-209ENST00000571558 COL5A1P20908 1838 aaPredicted RBP13.89□□□□□ -0.19
RPAIN-209ENST00000571558 A0A1B0GTQ1 180 aa13.89□□□□□ -0.19
RPAIN-209ENST00000571558 ZSCAN5CA6NGD5 496 aaPredicted RBP13.89□□□□□ -0.19
RPAIN-209ENST00000571558 CBX4O00257 560 aa13.89□□□□□ -0.19
RPAIN-209ENST00000571558 VILLO15195 856 aa13.89□□□□□ -0.19
RPAIN-209ENST00000571558 YKT6O15498 198 aa13.89□□□□□ -0.19
RPAIN-209ENST00000571558 SEMA4FO95754 770 aa13.89□□□□□ -0.19
RPAIN-209ENST00000571558 GAS8O95995 478 aa13.89□□□□□ -0.19
RPAIN-209ENST00000571558 JCHAINP01591 159 aa13.89□□□□□ -0.19
RPAIN-209ENST00000571558 KRT14P02533 472 aa13.89□□□□□ -0.19
RPAIN-209ENST00000571558 IVDP26440 423 aa13.89□□□□□ -0.19
RPAIN-209ENST00000571558 ACSL1P33121 698 aa13.89□□□□□ -0.19
RPAIN-209ENST00000571558 RPL22P35268 128 aaKnown RBP13.89□□□□□ -0.19
RPAIN-209ENST00000571558 RACK1P63244 317 aaKnown RBP13.89□□□□□ -0.19
RPAIN-209ENST00000571558 SEMG2Q02383 582 aa13.89□□□□□ -0.19
RPAIN-209ENST00000571558 CFHR1Q03591 330 aa13.89□□□□□ -0.19
RPAIN-209ENST00000571558 SLC10A7Q0GE19 358 aa13.89□□□□□ -0.19
RPAIN-209ENST00000571558 ILKQ13418 452 aa13.89□□□□□ -0.19
RPAIN-209ENST00000571558 P3H1Q32P28 736 aa13.89□□□□□ -0.19
RPAIN-209ENST00000571558 TEX44Q53QW1 395 aa13.89□□□□□ -0.19
RPAIN-209ENST00000571558 CCDC157Q569K6 752 aa13.89□□□□□ -0.19
RPAIN-209ENST00000571558 TEX35Q5T0J7 233 aa13.89□□□□□ -0.19
RPAIN-209ENST00000571558 LEKR1Q6ZMV7 388 aa13.89□□□□□ -0.19
RPAIN-209ENST00000571558 GSTA5Q7RTV2 222 aa13.89□□□□□ -0.19
RPAIN-209ENST00000571558 ZNF567Q8N184 647 aa13.89□□□□□ -0.19
RPAIN-209ENST00000571558 WFIKKN2Q8TEU8 576 aa13.89□□□□□ -0.19
RPAIN-209ENST00000571558 SEC14L1Q92503 715 aa13.89□□□□□ -0.19
RPAIN-209ENST00000571558 FGF11Q92914 225 aa13.89□□□□□ -0.19
RPAIN-209ENST00000571558 TEKT5Q96M29 485 aa13.89□□□□□ -0.19
RPAIN-209ENST00000571558 SPATA13Q96N96 652 aa13.89□□□□□ -0.19
RPAIN-209ENST00000571558 VAT1Q99536 393 aa13.89□□□□□ -0.19
RPAIN-209ENST00000571558 SP110Q9HB58 689 aa13.89□□□□□ -0.19
RPAIN-209ENST00000571558 SGK2Q9HBY8 427 aa13.89□□□□□ -0.19
RPAIN-209ENST00000571558 DMGDHQ9UI17 866 aaKnown RBP13.89□□□□□ -0.19
RPAIN-209ENST00000571558 HPCAL4Q9UM19 191 aa13.89□□□□□ -0.19
RPAIN-209ENST00000571558 PLA2G4CQ9UP65 541 aa13.89□□□□□ -0.19
RPAIN-209ENST00000571558 ACTL7AQ9Y615 435 aa13.89□□□□□ -0.19
RPAIN-209ENST00000571558 AK5Q9Y6K8 562 aa13.89□□□□□ -0.19
RPAIN-209ENST00000571558 PTPRQQ9UMZ3 2332 aa13.89□□□□□ -0.19
RPAIN-209ENST00000571558 ERVH48-1M5A8F1 160 aa13.88□□□□□ -0.19
RPAIN-209ENST00000571558 TLX3O43711 291 aaPredicted RBP13.88□□□□□ -0.19
RPAIN-209ENST00000571558 RFPL3O75679 317 aa13.88□□□□□ -0.19
RPAIN-209ENST00000571558 IFNB1P01574 187 aa13.88□□□□□ -0.19
RPAIN-209ENST00000571558 PRKCHP24723 683 aa13.88□□□□□ -0.19
RPAIN-209ENST00000571558 CD68P34810 354 aaPredicted RBP13.88□□□□□ -0.19
RPAIN-209ENST00000571558 CTSOP43234 321 aaPredicted RBP13.88□□□□□ -0.19
RPAIN-209ENST00000571558 RENBPP51606 427 aa13.88□□□□□ -0.19
RPAIN-209ENST00000571558 SLC7A5Q01650 507 aa13.88□□□□□ -0.19
RPAIN-209ENST00000571558 LBRQ14739 615 aaKnown RBP13.88□□□□□ -0.19
RPAIN-209ENST00000571558 PPP1R7Q15435 360 aa13.88□□□□□ -0.19
RPAIN-209ENST00000571558 TRIP13Q15645 432 aaPredicted RBP13.88□□□□□ -0.19
RPAIN-209ENST00000571558 INO80DQ53TQ3 878 aaPredicted RBP13.88□□□□□ -0.19
RPAIN-209ENST00000571558 ANKRD20A2Q5SQ80 823 aa13.88□□□□□ -0.19
RPAIN-209ENST00000571558 TMCO4Q5TGY1 634 aa13.88□□□□□ -0.19
RPAIN-209ENST00000571558 ANKRD20A1Q5TYW2 823 aa13.88□□□□□ -0.19
RPAIN-209ENST00000571558 ANKRD20A3Q5VUR7 823 aa13.88□□□□□ -0.19
RPAIN-209ENST00000571558 DUPD1Q68J44 220 aa13.88□□□□□ -0.19
RPAIN-209ENST00000571558 LINGO4Q6UY18 593 aa13.88□□□□□ -0.19
RPAIN-209ENST00000571558 FAM124AQ86V42 546 aa13.88□□□□□ -0.19
RPAIN-209ENST00000571558 ZNF354CQ86Y25 554 aa13.88□□□□□ -0.19
RPAIN-209ENST00000571558 AHI1Q8N157 1196 aa13.88□□□□□ -0.19
RPAIN-209ENST00000571558 CCDC89Q8N998 374 aa13.88□□□□□ -0.19
RPAIN-209ENST00000571558 CCDC110Q8TBZ0 833 aa13.88□□□□□ -0.19
RPAIN-209ENST00000571558 FERMT1Q9BQL6 677 aa13.88□□□□□ -0.19
RPAIN-209ENST00000571558 ERP44Q9BS26 406 aa13.88□□□□□ -0.19
RPAIN-209ENST00000571558 CEP41Q9BYV8 373 aa13.88□□□□□ -0.19
RPAIN-209ENST00000571558 CIPCQ9C0C6 399 aa13.88□□□□□ -0.19
RPAIN-209ENST00000571558 SEPT10Q9P0V9 454 aa13.88□□□□□ -0.19
RPAIN-209ENST00000571558 TRHDEQ9UKU6 1024 aa13.88□□□□□ -0.19
RPAIN-209ENST00000571558 SCML1Q9UN30 329 aa13.88□□□□□ -0.19
RPAIN-209ENST00000571558 ATP8A1Q9Y2Q0 1164 aa13.88□□□□□ -0.19
RPAIN-209ENST00000571558 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.87□□□□□ -0.19
RPAIN-209ENST00000571558 MUSKO15146 869 aa13.87□□□□□ -0.19
RPAIN-209ENST00000571558 TP73O15350 636 aa13.87□□□□□ -0.19
RPAIN-209ENST00000571558 STK10O94804 968 aaKnown RBP13.87□□□□□ -0.19
RPAIN-209ENST00000571558 HEXIM1O94992 359 aaKnown RBP13.87□□□□□ -0.19
RPAIN-209ENST00000571558 LDOC1O95751 146 aaPredicted RBP13.87□□□□□ -0.19
RPAIN-209ENST00000571558 MT-CO1P00395 513 aa13.87□□□□□ -0.19
RPAIN-209ENST00000571558 DNTTP04053 509 aa13.87□□□□□ -0.19
RPAIN-209ENST00000571558 HLA-DQB2P05538 268 aa13.87□□□□□ -0.19
RPAIN-209ENST00000571558 RHOXF2BP0C7M4 288 aa13.87□□□□□ -0.19
RPAIN-209ENST00000571558 ACTN2P35609 894 aa13.87□□□□□ -0.19
RPAIN-209ENST00000571558 VASPP50552 380 aaPredicted RBP13.87□□□□□ -0.19
RPAIN-209ENST00000571558 C21orf59P57076 290 aa13.87□□□□□ -0.19
RPAIN-209ENST00000571558 SLC20A2Q08357 652 aa13.87□□□□□ -0.19
RPAIN-209ENST00000571558 SFSWAPQ12872 951 aaKnown RBP13.87□□□□□ -0.19
RPAIN-209ENST00000571558 RFTN1Q14699 578 aaPredicted RBP13.87□□□□□ -0.19
RPAIN-209ENST00000571558 CYTH1Q15438 398 aa13.87□□□□□ -0.19
RPAIN-209ENST00000571558 TTC31Q49AM3 519 aaPredicted RBP13.87□□□□□ -0.19
RPAIN-209ENST00000571558 MARC1Q5VT66 337 aa13.87□□□□□ -0.19
RPAIN-209ENST00000571558 MBLAC2Q68D91 279 aa13.87□□□□□ -0.19
RPAIN-209ENST00000571558 PGBD5Q8N414 524 aa13.87□□□□□ -0.19
RPAIN-209ENST00000571558 MYRIPQ8NFW9 859 aa13.87□□□□□ -0.19
RPAIN-209ENST00000571558 MRGPRX3Q96LB0 322 aa13.87□□□□□ -0.19
RPAIN-209ENST00000571558 PSKH2Q96QS6 385 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms