RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 WSCD2Q2TBF2 565 aa13.48□□□□□ -0.25
RPAIN-207ENST00000570883 ODF2Q5BJF6 829 aa13.48□□□□□ -0.25
RPAIN-207ENST00000570883 KAZNQ674X7 775 aa13.48□□□□□ -0.25
RPAIN-207ENST00000570883 LIPIQ6XZB0 460 aa13.48□□□□□ -0.25
RPAIN-207ENST00000570883 KIAA1328Q86T90 577 aa13.48□□□□□ -0.25
RPAIN-207ENST00000570883 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.48□□□□□ -0.25
RPAIN-207ENST00000570883 CNTD1Q8N815 330 aa13.48□□□□□ -0.25
RPAIN-207ENST00000570883 EXD1Q8NHP7 514 aa13.48□□□□□ -0.25
RPAIN-207ENST00000570883 FAM174AQ8TBP5 190 aa13.48□□□□□ -0.25
RPAIN-207ENST00000570883 PDCD6IPQ8WUM4 868 aaKnown RBP13.48□□□□□ -0.25
RPAIN-207ENST00000570883 SMIM14Q96QK8 99 aa13.48□□□□□ -0.25
RPAIN-207ENST00000570883 IL12RB2Q99665 862 aa13.48□□□□□ -0.25
RPAIN-207ENST00000570883 CEP41Q9BYV8 373 aa13.48□□□□□ -0.25
RPAIN-207ENST00000570883 AMACRQ9UHK6 382 aa13.48□□□□□ -0.25
RPAIN-207ENST00000570883 WASF3Q9UPY6 502 aa13.48□□□□□ -0.25
RPAIN-207ENST00000570883 TTLL3Q9Y4R7 772 aa13.48□□□□□ -0.25
RPAIN-207ENST00000570883 RAI2Q9Y5P3 530 aa13.48□□□□□ -0.25
RPAIN-207ENST00000570883 ZFC3H1O60293 1989 aaKnown RBP13.48□□□□□ -0.25
RPAIN-207ENST00000570883 MYLKQ15746 1914 aa13.48□□□□□ -0.25
RPAIN-207ENST00000570883 ASXL3Q9C0F0 2248 aa13.48□□□□□ -0.25
RPAIN-207ENST00000570883 KNTC1P50748 2209 aa13.47□□□□□ -0.25
RPAIN-207ENST00000570883 SPTY2D1-AS1A0A0U1RR47 76 aa13.47□□□□□ -0.25
RPAIN-207ENST00000570883 MACROD2A1Z1Q3 448 aa13.47□□□□□ -0.25
RPAIN-207ENST00000570883 NPIPB15A6NHN6 443 aaPredicted RBP13.47□□□□□ -0.25
RPAIN-207ENST00000570883 A8MX80 341 aa13.47□□□□□ -0.25
RPAIN-207ENST00000570883 YKT6O15498 198 aa13.47□□□□□ -0.25
RPAIN-207ENST00000570883 ZRANB2O95218 330 aaKnown RBP eCLIP13.47□□□□□ -0.25
RPAIN-207ENST00000570883 TOP3BO95985 862 aaKnown RBP13.47□□□□□ -0.25
RPAIN-207ENST00000570883 ITGAVP06756 1048 aa13.47□□□□□ -0.25
RPAIN-207ENST00000570883 MMP2P08253 660 aa13.47□□□□□ -0.25
RPAIN-207ENST00000570883 LHCGRP22888 699 aa13.47□□□□□ -0.25
RPAIN-207ENST00000570883 RABIFP47224 123 aa13.47□□□□□ -0.25
RPAIN-207ENST00000570883 POLR2LP62875 67 aaKnown RBP13.47□□□□□ -0.25
RPAIN-207ENST00000570883 ITKQ08881 620 aa13.47□□□□□ -0.25
RPAIN-207ENST00000570883 AP1B1Q10567 949 aa13.47□□□□□ -0.25
RPAIN-207ENST00000570883 TFDP2Q14188 446 aa13.47□□□□□ -0.25
RPAIN-207ENST00000570883 SUZ12Q15022 739 aaKnown RBP13.47□□□□□ -0.25
RPAIN-207ENST00000570883 AGERQ15109 404 aa13.47□□□□□ -0.25
RPAIN-207ENST00000570883 PRKD1Q15139 912 aaPredicted RBP13.47□□□□□ -0.25
RPAIN-207ENST00000570883 CNGA3Q16281 694 aa13.47□□□□□ -0.25
RPAIN-207ENST00000570883 PPP2R5EQ16537 467 aa13.47□□□□□ -0.25
RPAIN-207ENST00000570883 ZNF542PQ5EBM4 170 aa13.47□□□□□ -0.25
RPAIN-207ENST00000570883 TFDP3Q5H9I0 405 aa13.47□□□□□ -0.25
RPAIN-207ENST00000570883 ARMC12Q5T9G4 340 aa13.47□□□□□ -0.25
RPAIN-207ENST00000570883 GLRX5Q86SX6 157 aa13.47□□□□□ -0.25
RPAIN-207ENST00000570883 RCOR2Q8IZ40 523 aa13.47□□□□□ -0.25
RPAIN-207ENST00000570883 PAF1Q8N7H5 531 aa13.47□□□□□ -0.25
RPAIN-207ENST00000570883 KIAA1524Q8TCG1 905 aa13.47□□□□□ -0.25
RPAIN-207ENST00000570883 RHBDD1Q8TEB9 315 aa13.47□□□□□ -0.25
RPAIN-207ENST00000570883 PIH1D2Q8WWB5 315 aa13.47□□□□□ -0.25
RPAIN-207ENST00000570883 ALG3Q92685 438 aa13.47□□□□□ -0.25
RPAIN-207ENST00000570883 RBM41Q96IZ5 413 aaKnown RBP13.47□□□□□ -0.25
RPAIN-207ENST00000570883 MCCC1Q96RQ3 725 aaPredicted RBP13.47□□□□□ -0.25
RPAIN-207ENST00000570883 C1QTNF7Q9BXJ2 289 aa13.47□□□□□ -0.25
RPAIN-207ENST00000570883 TDRD1Q9BXT4 1180 aaKnown RBP13.47□□□□□ -0.25
RPAIN-207ENST00000570883 TOR4AQ9NXH8 423 aa13.47□□□□□ -0.25
RPAIN-207ENST00000570883 PNMA8BQ9ULN7 279 aaPredicted RBP13.47□□□□□ -0.25
RPAIN-207ENST00000570883 PCDHA3Q9Y5H8 950 aa13.47□□□□□ -0.25
RPAIN-207ENST00000570883 BPTFQ12830 3046 aa13.47□□□□□ -0.25
RPAIN-207ENST00000570883 IGF2RP11717 2491 aa13.47□□□□□ -0.25
RPAIN-207ENST00000570883 RP1P56715 2156 aa13.47□□□□□ -0.25
RPAIN-207ENST00000570883 A0A0U1RQS6 177 aa13.46□□□□□ -0.25
RPAIN-207ENST00000570883 A0A1W2PQ67 120 aa13.46□□□□□ -0.25
RPAIN-207ENST00000570883 CFAP69A5D8W1 941 aa13.46□□□□□ -0.25
RPAIN-207ENST00000570883 PPP1R12AO14974 1030 aaPredicted RBP13.46□□□□□ -0.25
RPAIN-207ENST00000570883 RECQL5O94762 991 aaPredicted RBP13.46□□□□□ -0.25
RPAIN-207ENST00000570883 PRLP01236 227 aa13.46□□□□□ -0.25
RPAIN-207ENST00000570883 ALPIP09923 528 aa13.46□□□□□ -0.25
RPAIN-207ENST00000570883 ELFN1P0C7U0 828 aa13.46□□□□□ -0.25
RPAIN-207ENST00000570883 CTPS1P17812 591 aa13.46□□□□□ -0.25
RPAIN-207ENST00000570883 TGM2P21980 687 aa13.46□□□□□ -0.25
RPAIN-207ENST00000570883 CTNNA2P26232 953 aa13.46□□□□□ -0.25
RPAIN-207ENST00000570883 NR2C2P49116 596 aa13.46□□□□□ -0.25
RPAIN-207ENST00000570883 PEX5P50542 639 aa13.46□□□□□ -0.25
RPAIN-207ENST00000570883 NAP1L1P55209 391 aaKnown RBP13.46□□□□□ -0.25
RPAIN-207ENST00000570883 GSDMDP57764 484 aa13.46□□□□□ -0.25
RPAIN-207ENST00000570883 EIF2B5Q13144 721 aaKnown RBP13.46□□□□□ -0.25
RPAIN-207ENST00000570883 PDE1CQ14123 709 aaPredicted RBP13.46□□□□□ -0.25
RPAIN-207ENST00000570883 LRRC14Q15048 493 aa13.46□□□□□ -0.25
RPAIN-207ENST00000570883 BBS12Q6ZW61 710 aa13.46□□□□□ -0.25
RPAIN-207ENST00000570883 TSPAN33Q86UF1 283 aa13.46□□□□□ -0.25
RPAIN-207ENST00000570883 SLCO6A1Q86UG4 719 aa13.46□□□□□ -0.25
RPAIN-207ENST00000570883 NT5DC3Q86UY8 548 aa13.46□□□□□ -0.25
RPAIN-207ENST00000570883 DCP2Q8IU60 420 aaKnown RBP13.46□□□□□ -0.25
RPAIN-207ENST00000570883 CCDC50Q8IVM0 306 aa13.46□□□□□ -0.25
RPAIN-207ENST00000570883 PELI3Q8N2H9 469 aa13.46□□□□□ -0.25
RPAIN-207ENST00000570883 PLA2G15Q8NCC3 412 aa13.46□□□□□ -0.25
RPAIN-207ENST00000570883 HAUS1Q96CS2 278 aa13.46□□□□□ -0.25
RPAIN-207ENST00000570883 CALR3Q96L12 384 aaKnown RBP13.46□□□□□ -0.25
RPAIN-207ENST00000570883 COQ10AQ96MF6 247 aa13.46□□□□□ -0.25
RPAIN-207ENST00000570883 UCKL1Q9NWZ5 548 aa13.46□□□□□ -0.25
RPAIN-207ENST00000570883 DNAJC28Q9NX36 388 aa13.46□□□□□ -0.25
RPAIN-207ENST00000570883 KLF15Q9UIH9 416 aa13.46□□□□□ -0.25
RPAIN-207ENST00000570883 PHTF1Q9UMS5 762 aa13.46□□□□□ -0.25
RPAIN-207ENST00000570883 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.46□□□□□ -0.25
RPAIN-207ENST00000570883 PPIL1Q9Y3C6 166 aa13.46□□□□□ -0.25
RPAIN-207ENST00000570883 CAPN6Q9Y6Q1 641 aa13.46□□□□□ -0.25
RPAIN-207ENST00000570883 FREM2Q5SZK8 3169 aa13.46□□□□□ -0.26
RPAIN-207ENST00000570883 GOLGA8CPA6NN73 597 aa13.45□□□□□ -0.26
RPAIN-207ENST00000570883 GOLGA6L6A8MZA4 724 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms