RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 GLT6D1Q7Z4J2 308 aa15.49■□□□□ 0.07
HERPUD1-219ENST00000570273 CCNJLQ8IV13 435 aa15.49■□□□□ 0.07
HERPUD1-219ENST00000570273 ZNF687Q8N1G0 1237 aa15.49■□□□□ 0.07
HERPUD1-219ENST00000570273 SYNPOQ8N3V7 929 aa15.49■□□□□ 0.07
HERPUD1-219ENST00000570273 OR2T3Q8NH03 318 aa15.49■□□□□ 0.07
HERPUD1-219ENST00000570273 PTCD2Q8WV60 388 aaKnown RBP15.49■□□□□ 0.07
HERPUD1-219ENST00000570273 ARRDC3Q96B67 414 aa15.49■□□□□ 0.07
HERPUD1-219ENST00000570273 ZNF669Q96BR6 464 aaPredicted RBP15.49■□□□□ 0.07
HERPUD1-219ENST00000570273 RANBP9Q96S59 729 aa15.49■□□□□ 0.07
HERPUD1-219ENST00000570273 TRIM56Q9BRZ2 755 aaKnown RBP15.49■□□□□ 0.07
HERPUD1-219ENST00000570273 RSPH9Q9H1X1 276 aaPredicted RBP15.49■□□□□ 0.07
HERPUD1-219ENST00000570273 LMAN1LQ9HAT1 526 aa15.49■□□□□ 0.07
HERPUD1-219ENST00000570273 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.49■□□□□ 0.075e-9■■■□□ 15.6
HERPUD1-219ENST00000570273 HACD3Q9P035 362 aa15.49■□□□□ 0.07
HERPUD1-219ENST00000570273 MMP17Q9ULZ9 603 aa15.49■□□□□ 0.07
HERPUD1-219ENST00000570273 ZNF711Q9Y462 761 aa15.49■□□□□ 0.07
HERPUD1-219ENST00000570273 CUL9Q8IWT3 2517 aa15.49■□□□□ 0.07
HERPUD1-219ENST00000570273 RIPK2O43353 540 aa15.48■□□□□ 0.07
HERPUD1-219ENST00000570273 TTC4O95801 387 aa15.48■□□□□ 0.07
HERPUD1-219ENST00000570273 ADH1BP00325 375 aa15.48■□□□□ 0.07
HERPUD1-219ENST00000570273 TSHRP16473 764 aa15.48■□□□□ 0.07
HERPUD1-219ENST00000570273 NFKBIAP25963 317 aa15.48■□□□□ 0.07
HERPUD1-219ENST00000570273 HSD17B3P37058 310 aa15.48■□□□□ 0.07
HERPUD1-219ENST00000570273 ABL2P42684 1182 aa15.48■□□□□ 0.07
HERPUD1-219ENST00000570273 METAP1P53582 386 aa15.48■□□□□ 0.07
HERPUD1-219ENST00000570273 POLR2LP62875 67 aaKnown RBP15.48■□□□□ 0.07
HERPUD1-219ENST00000570273 SATB1Q01826 763 aa15.48■□□□□ 0.07
HERPUD1-219ENST00000570273 CRYMQ14894 314 aa15.48■□□□□ 0.07
HERPUD1-219ENST00000570273 PTPRRQ15256 657 aa15.48■□□□□ 0.07
HERPUD1-219ENST00000570273 ARMC3Q5W041 872 aa15.48■□□□□ 0.07
HERPUD1-219ENST00000570273 STEAP4Q687X5 459 aa15.48■□□□□ 0.07
HERPUD1-219ENST00000570273 PKN3Q6P5Z2 889 aa15.48■□□□□ 0.07
HERPUD1-219ENST00000570273 CES3Q6UWW8 571 aa15.48■□□□□ 0.07
HERPUD1-219ENST00000570273 UNC5AQ6ZN44 842 aa15.48■□□□□ 0.07
HERPUD1-219ENST00000570273 UHMK1Q8TAS1 419 aaKnown RBP15.48■□□□□ 0.07
HERPUD1-219ENST00000570273 HCAR2Q8TDS4 363 aa15.48■□□□□ 0.07
HERPUD1-219ENST00000570273 SPOCK2Q92563 424 aa15.48■□□□□ 0.07
HERPUD1-219ENST00000570273 KIFC1Q9BW19 673 aa15.48■□□□□ 0.07
HERPUD1-219ENST00000570273 PABPC3Q9H361 631 aaKnown RBP15.48■□□□□ 0.07
HERPUD1-219ENST00000570273 MRM3Q9HC36 420 aaKnown RBP15.48■□□□□ 0.07
HERPUD1-219ENST00000570273 MTF2Q9Y483 593 aaPredicted RBP15.48■□□□□ 0.07
HERPUD1-219ENST00000570273 RPS6KL1Q9Y6S9 549 aa15.48■□□□□ 0.07
HERPUD1-219ENST00000570273 FAM237BA0A1B0GVD1 139 aa15.47■□□□□ 0.07
HERPUD1-219ENST00000570273 A0A1W2PQF6 199 aa15.47■□□□□ 0.07
HERPUD1-219ENST00000570273 MAGEB16A2A368 324 aa15.47■□□□□ 0.07
HERPUD1-219ENST00000570273 FAM170BA6NMN3 283 aa15.47■□□□□ 0.07
HERPUD1-219ENST00000570273 STK25O00506 426 aa15.47■□□□□ 0.07
HERPUD1-219ENST00000570273 SPAG6O75602 509 aa15.47■□□□□ 0.07
HERPUD1-219ENST00000570273 CRTAMO95727 393 aa15.47■□□□□ 0.07
HERPUD1-219ENST00000570273 POLBP06746 335 aa15.47■□□□□ 0.07
HERPUD1-219ENST00000570273 TIMP2P16035 220 aa15.47■□□□□ 0.07
HERPUD1-219ENST00000570273 PHBP35232 272 aa15.47■□□□□ 0.07
HERPUD1-219ENST00000570273 HNF1BP35680 557 aa15.47■□□□□ 0.07
HERPUD1-219ENST00000570273 COPAP53621 1224 aa15.47■□□□□ 0.07
HERPUD1-219ENST00000570273 GPX6P59796 221 aa15.47■□□□□ 0.07
HERPUD1-219ENST00000570273 ZXDAP98168 799 aa15.47■□□□□ 0.07
HERPUD1-219ENST00000570273 MSLNQ13421 630 aaPredicted RBP15.47■□□□□ 0.07
HERPUD1-219ENST00000570273 LAMB3Q13751 1172 aa15.47■□□□□ 0.07
HERPUD1-219ENST00000570273 CST6Q15828 149 aa15.47■□□□□ 0.07
HERPUD1-219ENST00000570273 SPANXN3Q5MJ09 141 aa15.47■□□□□ 0.07
HERPUD1-219ENST00000570273 SPDYCQ5MJ68 293 aa15.47■□□□□ 0.07
HERPUD1-219ENST00000570273 BRSK1Q8TDC3 778 aa15.47■□□□□ 0.07
HERPUD1-219ENST00000570273 MCCC1Q96RQ3 725 aaPredicted RBP15.47■□□□□ 0.07
HERPUD1-219ENST00000570273 SRPK1Q96SB4 655 aaKnown RBP15.47■□□□□ 0.07
HERPUD1-219ENST00000570273 NELL2Q99435 816 aa15.47■□□□□ 0.07
HERPUD1-219ENST00000570273 GPR63Q9BZJ6 419 aa15.47■□□□□ 0.07
HERPUD1-219ENST00000570273 EPB41L4BQ9H329 900 aa15.47■□□□□ 0.07
HERPUD1-219ENST00000570273 TRABDQ9H4I3 376 aa15.47■□□□□ 0.07
HERPUD1-219ENST00000570273 MAGEE1Q9HCI5 957 aa15.47■□□□□ 0.07
HERPUD1-219ENST00000570273 LRRC4CQ9HCJ2 640 aa15.47■□□□□ 0.07
HERPUD1-219ENST00000570273 CHRAC1Q9NRG0 131 aa15.47■□□□□ 0.07
HERPUD1-219ENST00000570273 ARL5AQ9Y689 179 aa15.47■□□□□ 0.07
HERPUD1-219ENST00000570273 ANKRD36A6QL64 1941 aa15.47■□□□□ 0.07
HERPUD1-219ENST00000570273 NPIPB15A6NHN6 443 aaPredicted RBP15.46■□□□□ 0.07
HERPUD1-219ENST00000570273 MID1O15344 667 aa15.46■□□□□ 0.07
HERPUD1-219ENST00000570273 USP1O94782 785 aa15.46■□□□□ 0.07
HERPUD1-219ENST00000570273 ABHD2P08910 425 aa15.46■□□□□ 0.07
HERPUD1-219ENST00000570273 GSTA2P09210 222 aa15.46■□□□□ 0.07
HERPUD1-219ENST00000570273 CYP2A6P11509 494 aaPredicted RBP15.46■□□□□ 0.07
HERPUD1-219ENST00000570273 NMBRP28336 390 aa15.46■□□□□ 0.07
HERPUD1-219ENST00000570273 SSTR1P30872 391 aa15.46■□□□□ 0.07
HERPUD1-219ENST00000570273 NEK3P51956 506 aa15.46■□□□□ 0.07
HERPUD1-219ENST00000570273 RPS14P62263 151 aaKnown RBP15.46■□□□□ 0.07
HERPUD1-219ENST00000570273 CASP8Q14790 479 aa15.46■□□□□ 0.07
HERPUD1-219ENST00000570273 TAF1AQ15573 450 aaPredicted RBP15.46■□□□□ 0.07
HERPUD1-219ENST00000570273 UGP2Q16851 508 aa15.46■□□□□ 0.07
HERPUD1-219ENST00000570273 ANKRD20A4Q4UJ75 823 aa15.46■□□□□ 0.07
HERPUD1-219ENST00000570273 TSTD2Q5T7W7 516 aa15.46■□□□□ 0.07
HERPUD1-219ENST00000570273 ERAP2Q6P179 960 aa15.46■□□□□ 0.07
HERPUD1-219ENST00000570273 NLRP9Q7RTR0 991 aa15.46■□□□□ 0.07
HERPUD1-219ENST00000570273 LYSMD3Q7Z3D4 306 aa15.46■□□□□ 0.07
HERPUD1-219ENST00000570273 TTC30BQ8N4P2 665 aa15.46■□□□□ 0.07
HERPUD1-219ENST00000570273 MDGA1Q8NFP4 955 aa15.46■□□□□ 0.07
HERPUD1-219ENST00000570273 GSDMBQ8TAX9 411 aa15.46■□□□□ 0.07
HERPUD1-219ENST00000570273 SCRN2Q96FV2 425 aa15.46■□□□□ 0.07
HERPUD1-219ENST00000570273 PLAC1Q9HBJ0 212 aa15.46■□□□□ 0.07
HERPUD1-219ENST00000570273 PCDH12Q9NPG4 1184 aa15.46■□□□□ 0.07
HERPUD1-219ENST00000570273 POLR3BQ9NW08 1133 aaPredicted RBP15.46■□□□□ 0.07
HERPUD1-219ENST00000570273 B4GALT6Q9UBX8 382 aa15.46■□□□□ 0.07
HERPUD1-219ENST00000570273 PPIL1Q9Y3C6 166 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms