RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 PCOLCE2Q9UKZ9 415 aa6.71□□□□□ -1.34
SMG1-217ENST00000569764 AGAP1Q9UPQ3 857 aa6.71□□□□□ -1.34
SMG1-217ENST00000569764 PCDHGA8Q9Y5G5 932 aa6.71□□□□□ -1.34
SMG1-217ENST00000569764 TNPO3Q9Y5L0 923 aaKnown RBP6.71□□□□□ -1.34
SMG1-217ENST00000569764 COMMD3-BMI1R4GMX3 469 aa6.71□□□□□ -1.34
SMG1-217ENST00000569764 LRRD1A4D1F6 860 aa6.71□□□□□ -1.34
SMG1-217ENST00000569764 NDUFS8O00217 210 aa6.71□□□□□ -1.34
SMG1-217ENST00000569764 MBTPS2O43462 519 aa6.71□□□□□ -1.34
SMG1-217ENST00000569764 ATP9AO75110 1047 aa6.71□□□□□ -1.34
SMG1-217ENST00000569764 PSMD10O75832 226 aa6.71□□□□□ -1.34
SMG1-217ENST00000569764 CYP1A1P04798 512 aaPredicted RBP6.71□□□□□ -1.34
SMG1-217ENST00000569764 RETP07949 1114 aa6.71□□□□□ -1.34
SMG1-217ENST00000569764 BMP1P13497 986 aa6.71□□□□□ -1.34
SMG1-217ENST00000569764 PSMC3P17980 439 aa6.71□□□□□ -1.34
SMG1-217ENST00000569764 KRT4P19013 534 aa6.71□□□□□ -1.34
SMG1-217ENST00000569764 SOX9P48436 509 aa6.71□□□□□ -1.34
SMG1-217ENST00000569764 GBX2P52951 348 aaPredicted RBP6.71□□□□□ -1.34
SMG1-217ENST00000569764 DRP2Q13474 957 aa6.71□□□□□ -1.34
SMG1-217ENST00000569764 KCNC3Q14003 757 aa6.71□□□□□ -1.34
SMG1-217ENST00000569764 FUT11Q495W5 492 aa6.71□□□□□ -1.34
SMG1-217ENST00000569764 B3GNT9Q6UX72 402 aa6.71□□□□□ -1.34
SMG1-217ENST00000569764 RALGPS2Q86X27 583 aaPredicted RBP6.71□□□□□ -1.34
SMG1-217ENST00000569764 DENND6AQ8IWF6 608 aa6.71□□□□□ -1.34
SMG1-217ENST00000569764 ZFAND2BQ8WV99 257 aa6.71□□□□□ -1.34
SMG1-217ENST00000569764 SH3GL2Q99962 352 aa6.71□□□□□ -1.34
SMG1-217ENST00000569764 TRIM2Q9C040 744 aa6.71□□□□□ -1.34
SMG1-217ENST00000569764 WASH6PQ9NQA3 447 aa6.71□□□□□ -1.34
SMG1-217ENST00000569764 FBXO4Q9UKT5 387 aa6.71□□□□□ -1.34
SMG1-217ENST00000569764 TRIM33Q9UPN9 1127 aa6.71□□□□□ -1.34
SMG1-217ENST00000569764 ASTN1O14525 1302 aa6.71□□□□□ -1.34
SMG1-217ENST00000569764 RCCD1A6NED2 376 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 POM121BA6NF01 834 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 GOLGA8CPA6NN73 597 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 GRXCR1A8MXD5 290 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 DHX15O43143 795 aaKnown RBP6.7□□□□□ -1.34
SMG1-217ENST00000569764 PLATP00750 562 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 OPN1MWP04001 364 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 PROCP04070 461 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 FESP07332 822 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 PLEKP08567 350 aaPredicted RBP6.7□□□□□ -1.34
SMG1-217ENST00000569764 OPN1MW2P0DN77 364 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 OPN1MW3P0DN78 364 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 PDHA2P29803 388 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 DGKEP52429 567 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 GSDMDP57764 484 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 HTD2P86397 168 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 CSTF1Q05048 431 aaKnown RBP6.7□□□□□ -1.34
SMG1-217ENST00000569764 KCNAB2Q13303 367 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 ANGPT1Q15389 498 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 RABGAP1LQ5R372 815 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 DENND5AQ6IQ26 1287 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 ARMC6Q6NXE6 501 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 FDX2Q6P4F2 183 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 UNC13DQ70J99 1090 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 PRPF39Q86UA1 669 aaKnown RBP6.7□□□□□ -1.34
SMG1-217ENST00000569764 CCDC50Q8IVM0 306 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 SLC39A11Q8N1S5 342 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 RYBPQ8N488 228 aaPredicted RBP6.7□□□□□ -1.34
SMG1-217ENST00000569764 SLC7A14Q8TBB6 771 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 PPP1R16AQ96I34 528 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 ZFYVE19Q96K21 471 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 SPATA13Q96N96 652 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 HSD17B14Q9BPX1 270 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 AIFM2Q9BRQ8 373 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 CNPPD1Q9BV87 410 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 ABCG8Q9H221 673 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 FAM204AQ9H8W3 233 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 FANCEQ9HB96 536 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 TBC1D23Q9NUY8 699 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 TBC1D13Q9NVG8 400 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 SLC25A13Q9UJS0 675 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 VANGL2Q9ULK5 521 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 PCDHB11Q9Y5F2 797 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 FHOD1Q9Y613 1164 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 MYH10P35580 1976 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.7□□□□□ -1.34
SMG1-217ENST00000569764 GOLGA8QA0A0J9YX86 632 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 PTGES3LE9PB15 166 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 SPOPO43791 374 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 MFAP3LO75121 409 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 KCNK5O95279 499 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 NFICP08651 508 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 UMPSP11172 480 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 YWHAQP27348 245 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 RPA4Q13156 261 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 HERC3Q15034 1050 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 MLF2Q15773 248 aaPredicted RBP6.7□□□□□ -1.34
SMG1-217ENST00000569764 SGCAQ16586 387 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 SGSM1Q2NKQ1 1148 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 SNAP47Q5SQN1 464 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 VARS2Q5ST30 1063 aaKnown RBP6.7□□□□□ -1.34
SMG1-217ENST00000569764 LAIR1Q6GTX8 287 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 KIAA0319LQ8IZA0 1049 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 PPFIBP2Q8ND30 876 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 SMARCD2Q92925 531 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 PTP4A1Q93096 173 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 FIZ1Q96SL8 496 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 CIB1Q99828 191 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 C17orf80Q9BSJ5 609 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 ZNF518BQ9C0D4 1074 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms