RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 LRP3O75074 770 aa16.13■□□□□ 0.17
USB1-215ENST00000569252 RPP40O75818 363 aaKnown RBP16.13■□□□□ 0.17
USB1-215ENST00000569252 PGLSO95336 258 aa16.13■□□□□ 0.17
USB1-215ENST00000569252 METTL18O95568 372 aa16.13■□□□□ 0.17
USB1-215ENST00000569252 EPOP01588 193 aa16.13■□□□□ 0.17
USB1-215ENST00000569252 MMP2P08253 660 aa16.13■□□□□ 0.17
USB1-215ENST00000569252 HOXB3P14651 431 aaPredicted RBP16.13■□□□□ 0.17
USB1-215ENST00000569252 WNT3AP56704 352 aa16.13■□□□□ 0.17
USB1-215ENST00000569252 ELP6Q0PNE2 266 aa16.13■□□□□ 0.17
USB1-215ENST00000569252 CNTN1Q12860 1018 aa16.13■□□□□ 0.17
USB1-215ENST00000569252 UGP2Q16851 508 aa16.13■□□□□ 0.17
USB1-215ENST00000569252 FAM182AQ5T1J6 154 aa16.13■□□□□ 0.17
USB1-215ENST00000569252 STPG1Q5TH74 334 aa16.13■□□□□ 0.17
USB1-215ENST00000569252 SLC36A4Q6YBV0 504 aa16.13■□□□□ 0.17
USB1-215ENST00000569252 FAM124AQ86V42 546 aa16.13■□□□□ 0.17
USB1-215ENST00000569252 C11orf74Q86VG3 221 aa16.13■□□□□ 0.17
USB1-215ENST00000569252 FEM1CQ96JP0 617 aa16.13■□□□□ 0.17
USB1-215ENST00000569252 SRPK1Q96SB4 655 aaKnown RBP16.13■□□□□ 0.17
USB1-215ENST00000569252 MLPHQ9BV36 600 aaPredicted RBP16.13■□□□□ 0.17
USB1-215ENST00000569252 TDRD1Q9BXT4 1180 aaKnown RBP16.13■□□□□ 0.17
USB1-215ENST00000569252 RAB17Q9H0T7 212 aa16.13■□□□□ 0.17
USB1-215ENST00000569252 NEUROG2Q9H2A3 272 aa16.13■□□□□ 0.17
USB1-215ENST00000569252 CYP8B1Q9UNU6 501 aa16.13■□□□□ 0.17
USB1-215ENST00000569252 TBC1D3DA0A087WVF3 549 aa16.12■□□□□ 0.17
USB1-215ENST00000569252 TBC1D3IA0A087WXS9 549 aa16.12■□□□□ 0.17
USB1-215ENST00000569252 TBC1D3EA0A087X179 549 aa16.12■□□□□ 0.17
USB1-215ENST00000569252 TBC1D3KA0A087X1G2 549 aa16.12■□□□□ 0.17
USB1-215ENST00000569252 TBC1D3FA6NER0 549 aaPredicted RBP16.12■□□□□ 0.17
USB1-215ENST00000569252 TBC1D3LB9A6J9 549 aa16.12■□□□□ 0.17
USB1-215ENST00000569252 TRAFD1O14545 582 aaPredicted RBP16.12■□□□□ 0.17
USB1-215ENST00000569252 TTI1O43156 1089 aa16.12■□□□□ 0.17
USB1-215ENST00000569252 EPN2O95208 641 aa16.12■□□□□ 0.17
USB1-215ENST00000569252 APRTP07741 180 aa16.12■□□□□ 0.17
USB1-215ENST00000569252 TBC1D3HP0C7X1 549 aa16.12■□□□□ 0.17
USB1-215ENST00000569252 CYP2A6P11509 494 aaPredicted RBP16.12■□□□□ 0.17
USB1-215ENST00000569252 ADRB3P13945 408 aa16.12■□□□□ 0.17
USB1-215ENST00000569252 TIMP2P16035 220 aa16.12■□□□□ 0.17
USB1-215ENST00000569252 CD6P30203 668 aa16.12■□□□□ 0.17
USB1-215ENST00000569252 P2RY2P41231 377 aa16.12■□□□□ 0.17
USB1-215ENST00000569252 TERF1P54274 439 aa16.12■□□□□ 0.17
USB1-215ENST00000569252 FAM193AP78312 1265 aa16.12■□□□□ 0.17
USB1-215ENST00000569252 TRAF2Q12933 501 aa16.12■□□□□ 0.17
USB1-215ENST00000569252 PTK6Q13882 451 aa16.12■□□□□ 0.17
USB1-215ENST00000569252 FAXCQ5TGI0 409 aa16.12■□□□□ 0.17
USB1-215ENST00000569252 TBC1D3GQ6DHY5 549 aa16.12■□□□□ 0.17
USB1-215ENST00000569252 TBC1D3CQ6IPX1 549 aa16.12■□□□□ 0.17
USB1-215ENST00000569252 NAPEPLDQ6IQ20 393 aa16.12■□□□□ 0.17
USB1-215ENST00000569252 C8orf74Q6P047 294 aa16.12■□□□□ 0.17
USB1-215ENST00000569252 PPP1R21Q6ZMI0 780 aa16.12■□□□□ 0.17
USB1-215ENST00000569252 USP45Q70EL2 814 aa16.12■□□□□ 0.17
USB1-215ENST00000569252 PRUNE1Q86TP1 453 aa16.12■□□□□ 0.17
USB1-215ENST00000569252 TBC1D3Q8IZP1 549 aaPredicted RBP16.12■□□□□ 0.17
USB1-215ENST00000569252 AADATQ8N5Z0 425 aa16.12■□□□□ 0.17
USB1-215ENST00000569252 PDCD7Q8N8D1 485 aaKnown RBP16.12■□□□□ 0.17
USB1-215ENST00000569252 DNAAF3Q8N9W5 541 aa16.12■□□□□ 0.17
USB1-215ENST00000569252 BBOF1Q8ND07 529 aa16.12■□□□□ 0.17
USB1-215ENST00000569252 LPCAT1Q8NF37 534 aa16.12■□□□□ 0.17
USB1-215ENST00000569252 GAB3Q8WWW8 586 aa16.12■□□□□ 0.17
USB1-215ENST00000569252 ARRDC3Q96B67 414 aa16.12■□□□□ 0.17
USB1-215ENST00000569252 TBL1YQ9BQ87 522 aa16.12■□□□□ 0.17
USB1-215ENST00000569252 CARD6Q9BX69 1037 aa16.12■□□□□ 0.17
USB1-215ENST00000569252 KDM4CQ9H3R0 1056 aa16.12■□□□□ 0.17
USB1-215ENST00000569252 ANGPTL2Q9UKU9 493 aa16.12■□□□□ 0.17
USB1-215ENST00000569252 ABCA7Q8IZY2 2146 aa16.12■□□□□ 0.17
USB1-215ENST00000569252 BAHCC1Q9P281 2608 aa16.12■□□□□ 0.17
USB1-215ENST00000569252 FAM47DPA6NHR8 397 aa16.11■□□□□ 0.17
USB1-215ENST00000569252 UPK3BL1B0FP48 263 aa16.11■□□□□ 0.17
USB1-215ENST00000569252 C1QTNF9BB2RNN3 333 aa16.11■□□□□ 0.17
USB1-215ENST00000569252 ANKRD66B4E2M5 251 aa16.11■□□□□ 0.17
USB1-215ENST00000569252 UPK3BL2E5RIL1 263 aa16.11■□□□□ 0.17
USB1-215ENST00000569252 PCDH8O95206 1070 aa16.11■□□□□ 0.17
USB1-215ENST00000569252 AP2A1O95782 977 aa16.11■□□□□ 0.17
USB1-215ENST00000569252 NDST3O95803 873 aa16.11■□□□□ 0.17
USB1-215ENST00000569252 C1QTNF9P0C862 333 aa16.11■□□□□ 0.17
USB1-215ENST00000569252 HLA-DPA1P20036 260 aa16.11■□□□□ 0.17
USB1-215ENST00000569252 CNR2P34972 360 aa16.11■□□□□ 0.17
USB1-215ENST00000569252 PTGIRP43119 386 aa16.11■□□□□ 0.17
USB1-215ENST00000569252 GRIA4P48058 902 aa16.11■□□□□ 0.17
USB1-215ENST00000569252 TUBB4BP68371 445 aa16.11■□□□□ 0.17
USB1-215ENST00000569252 SEMA5AQ13591 1074 aa16.11■□□□□ 0.17
USB1-215ENST00000569252 ARHGEF7Q14155 803 aa16.11■□□□□ 0.17
USB1-215ENST00000569252 GLE1Q53GS7 698 aaKnown RBP16.11■□□□□ 0.17
USB1-215ENST00000569252 PSAPL1Q6NUJ1 521 aa16.11■□□□□ 0.17
USB1-215ENST00000569252 PARS2Q7L3T8 475 aaKnown RBP16.11■□□□□ 0.17
USB1-215ENST00000569252 JAMLQ86YT9 394 aa16.11■□□□□ 0.17
USB1-215ENST00000569252 SLC25A41Q8N5S1 370 aa16.11■□□□□ 0.17
USB1-215ENST00000569252 GLIS1Q8NBF1 620 aa16.11■□□□□ 0.17
USB1-215ENST00000569252 CXorf40AQ8TE69 158 aa16.11■□□□□ 0.17
USB1-215ENST00000569252 ECHDC3Q96DC8 303 aa16.11■□□□□ 0.17
USB1-215ENST00000569252 OXNAD1Q96HP4 312 aaPredicted RBP16.11■□□□□ 0.17
USB1-215ENST00000569252 FICDQ9BVA6 458 aa16.11■□□□□ 0.17
USB1-215ENST00000569252 USP36Q9P275 1121 aaKnown RBP16.11■□□□□ 0.17
USB1-215ENST00000569252 TPX2Q9ULW0 747 aaKnown RBP16.11■□□□□ 0.17
USB1-215ENST00000569252 MUC22E2RYF6 1773 aaPredicted RBP16.1■□□□□ 0.17
USB1-215ENST00000569252 ATRXP46100 2492 aa16.1■□□□□ 0.17
USB1-215ENST00000569252 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.1■□□□□ 0.17
USB1-215ENST00000569252 LOC285095A0A1B0GVY8 99 aa16.1■□□□□ 0.17
USB1-215ENST00000569252 EFCAB8A8MWE9 144 aa16.1■□□□□ 0.17
USB1-215ENST00000569252 TSPAN6O43657 245 aa16.1■□□□□ 0.17
USB1-215ENST00000569252 AGTP01019 485 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms