RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	HNRNPCL1	O60812	293 aa	Known RBP	3.35	□□□□□ -1.87
UBR1-209	ENST00000569243	SLC22A3	O75751	556 aa		3.35	□□□□□ -1.87
UBR1-209	ENST00000569243	CNP	P09543	421 aa	Known RBP	3.35	□□□□□ -1.87
UBR1-209	ENST00000569243	HNRNPCL4	P0DMR1	293 aa		3.35	□□□□□ -1.87
UBR1-209	ENST00000569243	ITGAX	P20702	1163 aa		3.35	□□□□□ -1.87
UBR1-209	ENST00000569243	MARK3	P27448	753 aa		3.35	□□□□□ -1.87
UBR1-209	ENST00000569243	CHKA	P35790	457 aa		3.35	□□□□□ -1.87
UBR1-209	ENST00000569243	IL15	P40933	162 aa	Predicted RBP	3.35	□□□□□ -1.87
UBR1-209	ENST00000569243	FUT6	P51993	359 aa		3.35	□□□□□ -1.87
UBR1-209	ENST00000569243	NR1H2	P55055	460 aa		3.35	□□□□□ -1.87
UBR1-209	ENST00000569243	HDAC4	P56524	1084 aa		3.35	□□□□□ -1.87
UBR1-209	ENST00000569243	RHBDL3	P58872	404 aa		3.35	□□□□□ -1.87
UBR1-209	ENST00000569243	SLC20A2	Q08357	652 aa		3.35	□□□□□ -1.87
UBR1-209	ENST00000569243	POSTN	Q15063	836 aa		3.35	□□□□□ -1.87
UBR1-209	ENST00000569243	EFNB3	Q15768	340 aa		3.35	□□□□□ -1.87
UBR1-209	ENST00000569243	KRT24	Q2M2I5	525 aa		3.35	□□□□□ -1.87
UBR1-209	ENST00000569243	SOWAHA	Q2M3V2	549 aa		3.35	□□□□□ -1.87
UBR1-209	ENST00000569243	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.35	□□□□□ -1.87
UBR1-209	ENST00000569243	NFE4	Q86UQ8	179 aa		3.35	□□□□□ -1.87
UBR1-209	ENST00000569243	MOGAT3	Q86VF5	341 aa		3.35	□□□□□ -1.87
UBR1-209	ENST00000569243	CPXM2	Q8N436	756 aa		3.35	□□□□□ -1.87
UBR1-209	ENST00000569243	SPATA22	Q8NHS9	363 aa		3.35	□□□□□ -1.87
UBR1-209	ENST00000569243	CTCFL	Q8NI51	663 aa	Predicted RBP	3.35	□□□□□ -1.87
UBR1-209	ENST00000569243	GDPD5	Q8WTR4	605 aa		3.35	□□□□□ -1.87
UBR1-209	ENST00000569243	RBM17	Q96I25	401 aa	Known RBP	3.35	□□□□□ -1.87
UBR1-209	ENST00000569243	CHODL	Q9H9P2	273 aa		3.35	□□□□□ -1.87
UBR1-209	ENST00000569243	FKRP	Q9H9S5	495 aa		3.35	□□□□□ -1.87
UBR1-209	ENST00000569243	TLR8	Q9NR97	1041 aa	Known RBP	3.35	□□□□□ -1.87
UBR1-209	ENST00000569243	POU2F3	Q9UKI9	436 aa		3.35	□□□□□ -1.87
UBR1-209	ENST00000569243	DNAJC16	Q9Y2G8	782 aa		3.35	□□□□□ -1.87
UBR1-209	ENST00000569243	GDA	Q9Y2T3	454 aa		3.35	□□□□□ -1.87
UBR1-209	ENST00000569243	RIPOR2	Q9Y4F9	1068 aa		3.35	□□□□□ -1.87
UBR1-209	ENST00000569243	PCDHGB5	Q9Y5G0	923 aa		3.35	□□□□□ -1.87
UBR1-209	ENST00000569243	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		3.34	□□□□□ -1.87
UBR1-209	ENST00000569243	TYW5	A2RUC4	315 aa	Known RBP	3.34	□□□□□ -1.87
UBR1-209	ENST00000569243	ASPDH	A6ND91	283 aa		3.34	□□□□□ -1.87
UBR1-209	ENST00000569243	STX16-NPEPL1	H3BU86	382 aa		3.34	□□□□□ -1.87
UBR1-209	ENST00000569243	STX16	O14662	325 aa		3.34	□□□□□ -1.87
UBR1-209	ENST00000569243	NDUFS7	O75251	213 aa		3.34	□□□□□ -1.87
UBR1-209	ENST00000569243	AMBP	P02760	352 aa		3.34	□□□□□ -1.87
UBR1-209	ENST00000569243	PAPOLA	P51003	745 aa	Known RBP	3.34	□□□□□ -1.87
UBR1-209	ENST00000569243	ARL4C	P56559	192 aa		3.34	□□□□□ -1.87
UBR1-209	ENST00000569243	YWHAZ	P63104	245 aa	Known RBP	3.34	□□□□□ -1.87
UBR1-209	ENST00000569243	PITX1	P78337	314 aa	Predicted RBP	3.34	□□□□□ -1.87
UBR1-209	ENST00000569243	OS9	Q13438	667 aa	Predicted RBP	3.34	□□□□□ -1.87
UBR1-209	ENST00000569243	NEDD9	Q14511	834 aa		3.34	□□□□□ -1.87
UBR1-209	ENST00000569243	EDRF1	Q3B7T1	1238 aa		3.34	□□□□□ -1.87
UBR1-209	ENST00000569243	TMEM30B	Q3MIR4	351 aa		3.34	□□□□□ -1.87
UBR1-209	ENST00000569243	FBXO43	Q4G163	708 aa		3.34	□□□□□ -1.87
UBR1-209	ENST00000569243	ESCO2	Q56NI9	601 aa		3.34	□□□□□ -1.87
UBR1-209	ENST00000569243	TBC1D26	Q86UD7	250 aa		3.34	□□□□□ -1.87
UBR1-209	ENST00000569243	HERC6	Q8IVU3	1022 aa		3.34	□□□□□ -1.87
UBR1-209	ENST00000569243	NKAP	Q8N5F7	415 aa	Known RBP	3.34	□□□□□ -1.87
UBR1-209	ENST00000569243	MYCT1	Q8N699	235 aa		3.34	□□□□□ -1.87
UBR1-209	ENST00000569243	OR13A1	Q8NGR1	328 aa		3.34	□□□□□ -1.87
UBR1-209	ENST00000569243	GRAPL	Q8TC17	118 aa	Predicted RBP	3.34	□□□□□ -1.87
UBR1-209	ENST00000569243	RAB40A	Q8WXH6	277 aa		3.34	□□□□□ -1.87
UBR1-209	ENST00000569243	ISCA1	Q9BUE6	129 aa		3.34	□□□□□ -1.87
UBR1-209	ENST00000569243	C17orf75	Q9HAS0	396 aa		3.34	□□□□□ -1.87
UBR1-209	ENST00000569243	NOD2	Q9HC29	1040 aa		3.34	□□□□□ -1.87
UBR1-209	ENST00000569243	PTPRH	Q9HD43	1115 aa		3.34	□□□□□ -1.87
UBR1-209	ENST00000569243	SMYD2	Q9NRG4	433 aa		3.34	□□□□□ -1.87
UBR1-209	ENST00000569243	ABCF3	Q9NUQ8	709 aa		3.34	□□□□□ -1.87
UBR1-209	ENST00000569243	FEM1B	Q9UK73	627 aa		3.34	□□□□□ -1.87
UBR1-209	ENST00000569243	CDC14A	Q9UNH5	594 aa		3.34	□□□□□ -1.87
UBR1-209	ENST00000569243	ZNF711	Q9Y462	761 aa		3.34	□□□□□ -1.87
UBR1-209	ENST00000569243	COMMD10	Q9Y6G5	202 aa		3.34	□□□□□ -1.87
UBR1-209	ENST00000569243	IGKV3D-20	A0A0C4DH25	116 aa		3.33	□□□□□ -1.88
UBR1-209	ENST00000569243	KLRF2	D3W0D1	207 aa		3.33	□□□□□ -1.88
UBR1-209	ENST00000569243	PLRG1	O43660	514 aa	Known RBP	3.33	□□□□□ -1.88
UBR1-209	ENST00000569243	TSPAN3	O60637	253 aa		3.33	□□□□□ -1.88
UBR1-209	ENST00000569243	RGS11	O94810	467 aa		3.33	□□□□□ -1.88
UBR1-209	ENST00000569243	APOH	P02749	345 aa	Predicted RBP	3.33	□□□□□ -1.88
UBR1-209	ENST00000569243	KRT5	P13647	590 aa		3.33	□□□□□ -1.88
UBR1-209	ENST00000569243	ATP12A	P54707	1039 aa		3.33	□□□□□ -1.88
UBR1-209	ENST00000569243	TBL3	Q12788	808 aa	Known RBP	3.33	□□□□□ -1.88
UBR1-209	ENST00000569243	ARHGEF6	Q15052	776 aa		3.33	□□□□□ -1.88
UBR1-209	ENST00000569243	ANKRD1	Q15327	319 aa		3.33	□□□□□ -1.88
UBR1-209	ENST00000569243	FBXO47	Q5MNV8	452 aa		3.33	□□□□□ -1.88
UBR1-209	ENST00000569243	CCNYL2	Q5T2Q4	361 aa		3.33	□□□□□ -1.88
UBR1-209	ENST00000569243	ANO1	Q5XXA6	986 aa		3.33	□□□□□ -1.88
UBR1-209	ENST00000569243	TRNP1	Q6NT89	227 aa		3.33	□□□□□ -1.88
UBR1-209	ENST00000569243	C17orf99	Q6UX52	265 aa		3.33	□□□□□ -1.88
UBR1-209	ENST00000569243	DGLUCY	Q7Z3D6	616 aa		3.33	□□□□□ -1.88
UBR1-209	ENST00000569243	SPATA5	Q8NB90	893 aa		3.33	□□□□□ -1.88
UBR1-209	ENST00000569243	AGBL3	Q8NEM8	1001 aa		3.33	□□□□□ -1.88
UBR1-209	ENST00000569243	AFG1L	Q8WV93	481 aa		3.33	□□□□□ -1.88
UBR1-209	ENST00000569243	CNOT9	Q92600	299 aa	Known RBP	3.33	□□□□□ -1.88
UBR1-209	ENST00000569243	GFRA4	Q9GZZ7	299 aa		3.33	□□□□□ -1.88
UBR1-209	ENST00000569243	PLEKHA5	Q9HAU0	1116 aa		3.33	□□□□□ -1.88
UBR1-209	ENST00000569243	TMEM30A	Q9NV96	361 aa		3.33	□□□□□ -1.88
UBR1-209	ENST00000569243	C1RL	Q9NZP8	487 aa		3.33	□□□□□ -1.88
UBR1-209	ENST00000569243	RRP7A	Q9Y3A4	280 aa	Known RBP	3.33	□□□□□ -1.88
UBR1-209	ENST00000569243	A3GALT2	U3KPV4	340 aa		3.33	□□□□□ -1.88
UBR1-209	ENST00000569243	FAM90A7P	A6NKC0	464 aa		3.32	□□□□□ -1.88
UBR1-209	ENST00000569243	FAM90A22P	A8MWA6	464 aa		3.32	□□□□□ -1.88
UBR1-209	ENST00000569243	FAM90A12P	A8MX19	464 aa		3.32	□□□□□ -1.88
UBR1-209	ENST00000569243	FAM90A23P	A8MXZ1	464 aa		3.32	□□□□□ -1.88
UBR1-209	ENST00000569243		B9A039	149 aa		3.32	□□□□□ -1.88
UBR1-209	ENST00000569243	ANP32C	O43423	234 aa		3.32	□□□□□ -1.88

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms