RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 SYDE1Q6ZW31 735 aaPredicted RBP11.54□□□□□ -0.56
KARS-207ENST00000566560 USP45Q70EL2 814 aa11.54□□□□□ -0.56
KARS-207ENST00000566560 KDELC2Q7Z4H8 507 aa11.54□□□□□ -0.56
KARS-207ENST00000566560 CTAGE6Q86UF2 777 aa11.54□□□□□ -0.56
KARS-207ENST00000566560 JAMLQ86YT9 394 aa11.54□□□□□ -0.56
KARS-207ENST00000566560 CTAGE4Q8IX94 777 aa11.54□□□□□ -0.56
KARS-207ENST00000566560 OR14C36Q8NHC7 312 aa11.54□□□□□ -0.56
KARS-207ENST00000566560 CCHCR1Q8TD31 782 aa11.54□□□□□ -0.56
KARS-207ENST00000566560 NELL1Q92832 810 aa11.54□□□□□ -0.56
KARS-207ENST00000566560 RAB7BQ96AH8 199 aa11.54□□□□□ -0.56
KARS-207ENST00000566560 TOE1Q96GM8 510 aaKnown RBP11.54□□□□□ -0.56
KARS-207ENST00000566560 MRGPRX2Q96LB1 330 aa11.54□□□□□ -0.56
KARS-207ENST00000566560 TRIB3Q96RU7 358 aa11.54□□□□□ -0.56
KARS-207ENST00000566560 PRRX2Q99811 253 aa11.54□□□□□ -0.56
KARS-207ENST00000566560 TRIM51Q9BSJ1 452 aa11.54□□□□□ -0.56
KARS-207ENST00000566560 ADGRE3Q9BY15 652 aa11.54□□□□□ -0.56
KARS-207ENST00000566560 LRRC40Q9H9A6 602 aa11.54□□□□□ -0.56
KARS-207ENST00000566560 ETNK1Q9HBU6 452 aa11.54□□□□□ -0.56
KARS-207ENST00000566560 PCDH12Q9NPG4 1184 aa11.54□□□□□ -0.56
KARS-207ENST00000566560 ZSCAN32Q9NX65 697 aa11.54□□□□□ -0.56
KARS-207ENST00000566560 PHTF1Q9UMS5 762 aa11.54□□□□□ -0.56
KARS-207ENST00000566560 RPL26L1Q9UNX3 145 aaKnown RBP11.54□□□□□ -0.56
KARS-207ENST00000566560 INVSQ9Y283 1065 aa11.54□□□□□ -0.56
KARS-207ENST00000566560 NEU2Q9Y3R4 380 aa11.54□□□□□ -0.56
KARS-207ENST00000566560 PCDHGA2Q9Y5H1 932 aa11.54□□□□□ -0.56
KARS-207ENST00000566560 LRRK1Q38SD2 2015 aa11.53□□□□□ -0.56
KARS-207ENST00000566560 TRPM6Q9BX84 2022 aa11.53□□□□□ -0.56
KARS-207ENST00000566560 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.53□□□□□ -0.56
KARS-207ENST00000566560 PRR23AA6NEV1 266 aa11.53□□□□□ -0.56
KARS-207ENST00000566560 CAPN8A6NHC0 703 aa11.53□□□□□ -0.56
KARS-207ENST00000566560 FAM47DPA6NHR8 397 aa11.53□□□□□ -0.56
KARS-207ENST00000566560 LRRC72A6NJI9 287 aa11.53□□□□□ -0.56
KARS-207ENST00000566560 ERI2A8K979 691 aaKnown RBP11.53□□□□□ -0.56
KARS-207ENST00000566560 NEMP1O14524 444 aa11.53□□□□□ -0.56
KARS-207ENST00000566560 TTI1O43156 1089 aa11.53□□□□□ -0.56
KARS-207ENST00000566560 SPINT1O43278 529 aa11.53□□□□□ -0.56
KARS-207ENST00000566560 DXOO77932 396 aaKnown RBP11.53□□□□□ -0.56
KARS-207ENST00000566560 SEMA4FO95754 770 aa11.53□□□□□ -0.56
KARS-207ENST00000566560 AP2A1O95782 977 aa11.53□□□□□ -0.56
KARS-207ENST00000566560 NDST3O95803 873 aa11.53□□□□□ -0.56
KARS-207ENST00000566560 PRLP01236 227 aa11.53□□□□□ -0.56
KARS-207ENST00000566560 FGF1P05230 155 aa11.53□□□□□ -0.56
KARS-207ENST00000566560 APRTP07741 180 aa11.53□□□□□ -0.56
KARS-207ENST00000566560 ATXN1LP0C7T5 689 aaKnown RBP11.53□□□□□ -0.56
KARS-207ENST00000566560 TIMP2P16035 220 aa11.53□□□□□ -0.56
KARS-207ENST00000566560 HLA-DPA1P20036 260 aa11.53□□□□□ -0.56
KARS-207ENST00000566560 BCKDHBP21953 392 aa11.53□□□□□ -0.56
KARS-207ENST00000566560 ACSL1P33121 698 aa11.53□□□□□ -0.56
KARS-207ENST00000566560 MMP12P39900 470 aa11.53□□□□□ -0.56
KARS-207ENST00000566560 PTGIRP43119 386 aa11.53□□□□□ -0.56
KARS-207ENST00000566560 SUOXP51687 545 aa11.53□□□□□ -0.56
KARS-207ENST00000566560 TERF1P54274 439 aa11.53□□□□□ -0.56
KARS-207ENST00000566560 TAS2R38P59533 333 aa11.53□□□□□ -0.56
KARS-207ENST00000566560 ELP6Q0PNE2 266 aa11.53□□□□□ -0.56
KARS-207ENST00000566560 SRSF5Q13243 272 aaKnown RBP11.53□□□□□ -0.56
KARS-207ENST00000566560 OLIG2Q13516 323 aa11.53□□□□□ -0.56
KARS-207ENST00000566560 CCDC70Q6NSX1 233 aa11.53□□□□□ -0.56
KARS-207ENST00000566560 C8orf74Q6P047 294 aa11.53□□□□□ -0.56
KARS-207ENST00000566560 TTC7BQ86TV6 843 aa11.53□□□□□ -0.56
KARS-207ENST00000566560 KLHDC8BQ8IXV7 354 aa11.53□□□□□ -0.56
KARS-207ENST00000566560 NDUFAF2Q8N183 169 aa11.53□□□□□ -0.56
KARS-207ENST00000566560 FRMD1Q8N878 549 aa11.53□□□□□ -0.56
KARS-207ENST00000566560 CEP112Q8N8E3 955 aa11.53□□□□□ -0.56
KARS-207ENST00000566560 PRSS33Q8NF86 280 aa11.53□□□□□ -0.56
KARS-207ENST00000566560 PIH1D2Q8WWB5 315 aa11.53□□□□□ -0.56
KARS-207ENST00000566560 GAB3Q8WWW8 586 aa11.53□□□□□ -0.56
KARS-207ENST00000566560 RMDN1Q96DB5 314 aa11.53□□□□□ -0.56
KARS-207ENST00000566560 TBL1YQ9BQ87 522 aa11.53□□□□□ -0.56
KARS-207ENST00000566560 APOL2Q9BQE5 337 aa11.53□□□□□ -0.56
KARS-207ENST00000566560 PREBQ9HCU5 417 aa11.53□□□□□ -0.56
KARS-207ENST00000566560 PRDM9Q9NQV7 894 aa11.53□□□□□ -0.56
KARS-207ENST00000566560 EIF2B3Q9NR50 452 aaKnown RBP11.53□□□□□ -0.56
KARS-207ENST00000566560 WSB2Q9NYS7 404 aaPredicted RBP11.53□□□□□ -0.56
KARS-207ENST00000566560 MBD1Q9UIS9 605 aaPredicted RBP11.53□□□□□ -0.56
KARS-207ENST00000566560 GGT7Q9UJ14 662 aa11.53□□□□□ -0.56
KARS-207ENST00000566560 FADS3Q9Y5Q0 445 aa11.53□□□□□ -0.56
KARS-207ENST00000566560 THADAQ6YHU6 1953 aa11.53□□□□□ -0.56
KARS-207ENST00000566560 SCN8AQ9UQD0 1980 aa11.53□□□□□ -0.56
KARS-207ENST00000566560 A0A0J9YYE9 177 aa11.52□□□□□ -0.57
KARS-207ENST00000566560 NPIPB15A6NHN6 443 aaPredicted RBP11.52□□□□□ -0.57
KARS-207ENST00000566560 H0Y858 1186 aa11.52□□□□□ -0.57
KARS-207ENST00000566560 AREL1O15033 823 aa11.52□□□□□ -0.57
KARS-207ENST00000566560 PSMD3O43242 534 aa11.52□□□□□ -0.57
KARS-207ENST00000566560 RAD51CO43502 376 aa11.52□□□□□ -0.57
KARS-207ENST00000566560 AP1G1O43747 822 aa11.52□□□□□ -0.57
KARS-207ENST00000566560 NDUFS2O75306 463 aa11.52□□□□□ -0.57
KARS-207ENST00000566560 USP12O75317 370 aa11.52□□□□□ -0.57
KARS-207ENST00000566560 PCDH8O95206 1070 aa11.52□□□□□ -0.57
KARS-207ENST00000566560 EPOP01588 193 aa11.52□□□□□ -0.57
KARS-207ENST00000566560 TRBC1P01850 177 aa11.52□□□□□ -0.57
KARS-207ENST00000566560 ALPIP09923 528 aa11.52□□□□□ -0.57
KARS-207ENST00000566560 CYP2A6P11509 494 aaPredicted RBP11.52□□□□□ -0.57
KARS-207ENST00000566560 CTPS1P17812 591 aa11.52□□□□□ -0.57
KARS-207ENST00000566560 CHRNA4P43681 627 aa11.52□□□□□ -0.57
KARS-207ENST00000566560 PPP2CBP62714 309 aa11.52□□□□□ -0.57
KARS-207ENST00000566560 PPP2CAP67775 309 aa11.52□□□□□ -0.57
KARS-207ENST00000566560 FAM193AP78312 1265 aa11.52□□□□□ -0.57
KARS-207ENST00000566560 MRPS25P82663 173 aaKnown RBP11.52□□□□□ -0.57
KARS-207ENST00000566560 SEMG2Q02383 582 aa11.52□□□□□ -0.57
KARS-207ENST00000566560 RPL6Q02878 288 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms