RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 TGM2P21980 687 aa10.08□□□□□ -0.8
CMTM3-209ENST00000565003 HNRNPH3P31942 346 aaKnown RBP10.08□□□□□ -0.8
CMTM3-209ENST00000565003 PEX5P50542 639 aa10.08□□□□□ -0.8
CMTM3-209ENST00000565003 DUSP3P51452 185 aaPredicted RBP10.08□□□□□ -0.8
CMTM3-209ENST00000565003 RENBPP51606 427 aa10.08□□□□□ -0.8
CMTM3-209ENST00000565003 ARSEP51690 589 aa10.08□□□□□ -0.8
CMTM3-209ENST00000565003 HK3P52790 923 aa10.08□□□□□ -0.8
CMTM3-209ENST00000565003 CDH6P55285 790 aa10.08□□□□□ -0.8
CMTM3-209ENST00000565003 MAXP61244 160 aa10.08□□□□□ -0.8
CMTM3-209ENST00000565003 MMRN1Q13201 1228 aa10.08□□□□□ -0.8
CMTM3-209ENST00000565003 MTM1Q13496 603 aa10.08□□□□□ -0.8
CMTM3-209ENST00000565003 KRT81Q14533 505 aa10.08□□□□□ -0.8
CMTM3-209ENST00000565003 ZNF235Q14590 738 aa10.08□□□□□ -0.8
CMTM3-209ENST00000565003 NFATC4Q14934 902 aa10.08□□□□□ -0.8
CMTM3-209ENST00000565003 NR0B2Q15466 257 aa10.08□□□□□ -0.8
CMTM3-209ENST00000565003 TCEA2Q15560 299 aa10.08□□□□□ -0.8
CMTM3-209ENST00000565003 ATP13A4Q4VNC1 1196 aa10.08□□□□□ -0.8
CMTM3-209ENST00000565003 PERM1Q5SV97 790 aa10.08□□□□□ -0.8
CMTM3-209ENST00000565003 C6orf132Q5T0Z8 1188 aa10.08□□□□□ -0.8
CMTM3-209ENST00000565003 CRTC1Q6UUV9 634 aa10.08□□□□□ -0.8
CMTM3-209ENST00000565003 ENPP7Q6UWV6 458 aa10.08□□□□□ -0.8
CMTM3-209ENST00000565003 DPPA4Q7L190 304 aa10.08□□□□□ -0.8
CMTM3-209ENST00000565003 EFL1Q7Z2Z2 1120 aaKnown RBP10.08□□□□□ -0.8
CMTM3-209ENST00000565003 PDZD3Q86UT5 571 aa10.08□□□□□ -0.8
CMTM3-209ENST00000565003 HID1Q8IV36 788 aa10.08□□□□□ -0.8
CMTM3-209ENST00000565003 PELI3Q8N2H9 469 aa10.08□□□□□ -0.8
CMTM3-209ENST00000565003 ATPAF2Q8N5M1 289 aa10.08□□□□□ -0.8
CMTM3-209ENST00000565003 PAF1Q8N7H5 531 aa10.08□□□□□ -0.8
CMTM3-209ENST00000565003 ZNF564Q8TBZ8 553 aaPredicted RBP10.08□□□□□ -0.8
CMTM3-209ENST00000565003 FAM71BQ8TC56 605 aa10.08□□□□□ -0.8
CMTM3-209ENST00000565003 MAPK15Q8TD08 544 aa10.08□□□□□ -0.8
CMTM3-209ENST00000565003 SPOCK2Q92563 424 aa10.08□□□□□ -0.8
CMTM3-209ENST00000565003 PDXPQ96GD0 296 aa10.08□□□□□ -0.8
CMTM3-209ENST00000565003 CRELD1Q96HD1 420 aa10.08□□□□□ -0.8
CMTM3-209ENST00000565003 DCBLD2Q96PD2 775 aa10.08□□□□□ -0.8
CMTM3-209ENST00000565003 MGME1Q9BQP7 344 aa10.08□□□□□ -0.8
CMTM3-209ENST00000565003 PACSIN1Q9BY11 444 aa10.08□□□□□ -0.8
CMTM3-209ENST00000565003 NOD2Q9HC29 1040 aa10.08□□□□□ -0.8
CMTM3-209ENST00000565003 EVA1BQ9NVM1 165 aa10.08□□□□□ -0.8
CMTM3-209ENST00000565003 NCKIPSDQ9NZQ3 722 aa10.08□□□□□ -0.8
CMTM3-209ENST00000565003 B4GALT6Q9UBX8 382 aa10.08□□□□□ -0.8
CMTM3-209ENST00000565003 SALL4Q9UJQ4 1053 aa10.08□□□□□ -0.8
CMTM3-209ENST00000565003 PCDHGC4Q9Y5F7 938 aa10.08□□□□□ -0.8
CMTM3-209ENST00000565003 RP1P56715 2156 aa10.08□□□□□ -0.8
CMTM3-209ENST00000565003 SHROOM3Q8TF72 1996 aa10.07□□□□□ -0.8
CMTM3-209ENST00000565003 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.07□□□□□ -0.8
CMTM3-209ENST00000565003 TMEM110-MUSTN1A8MSY1 372 aa10.07□□□□□ -0.8
CMTM3-209ENST00000565003 MYO1FO00160 1098 aa10.07□□□□□ -0.8
CMTM3-209ENST00000565003 YY2O15391 372 aa10.07□□□□□ -0.8
CMTM3-209ENST00000565003 SOCS5O75159 536 aa10.07□□□□□ -0.8
CMTM3-209ENST00000565003 CSO75390 466 aaKnown RBP10.07□□□□□ -0.8
CMTM3-209ENST00000565003 RASGRP1O95267 797 aa10.07□□□□□ -0.8
CMTM3-209ENST00000565003 MPOP05164 745 aa10.07□□□□□ -0.8
CMTM3-209ENST00000565003 ANXA6P08133 673 aa10.07□□□□□ -0.8
CMTM3-209ENST00000565003 HTR1BP28222 390 aa10.07□□□□□ -0.8
CMTM3-209ENST00000565003 SERPINB6P35237 376 aa10.07□□□□□ -0.8
CMTM3-209ENST00000565003 GJC1P36383 396 aa10.07□□□□□ -0.8
CMTM3-209ENST00000565003 HSPA9P38646 679 aaKnown RBP10.07□□□□□ -0.8
CMTM3-209ENST00000565003 SSR1P43307 286 aaKnown RBP10.07□□□□□ -0.8
CMTM3-209ENST00000565003 BLKP51451 505 aa10.07□□□□□ -0.8
CMTM3-209ENST00000565003 SRP54P61011 504 aaKnown RBP10.07□□□□□ -0.8
CMTM3-209ENST00000565003 POLR2LP62875 67 aaKnown RBP10.07□□□□□ -0.8
CMTM3-209ENST00000565003 TRAF2Q12933 501 aa10.07□□□□□ -0.8
CMTM3-209ENST00000565003 DPYSL3Q14195 570 aa10.07□□□□□ -0.8
CMTM3-209ENST00000565003 CNGA3Q16281 694 aa10.07□□□□□ -0.8
CMTM3-209ENST00000565003 NCBP2-AS2Q69YL0 99 aa10.07□□□□□ -0.8
CMTM3-209ENST00000565003 RD3Q7Z3Z2 195 aa10.07□□□□□ -0.8
CMTM3-209ENST00000565003 FSTL5Q8N475 847 aaPredicted RBP10.07□□□□□ -0.8
CMTM3-209ENST00000565003 PCDH19Q8TAB3 1148 aa10.07□□□□□ -0.8
CMTM3-209ENST00000565003 PDCD6IPQ8WUM4 868 aaKnown RBP10.07□□□□□ -0.8
CMTM3-209ENST00000565003 FUBP1Q96AE4 644 aaKnown RBP10.07□□□□□ -0.8
CMTM3-209ENST00000565003 WDR92Q96MX6 357 aa10.07□□□□□ -0.8
CMTM3-209ENST00000565003 DEPDC7Q96QD5 511 aa10.07□□□□□ -0.8
CMTM3-209ENST00000565003 NUDCD1Q96RS6 583 aa10.07□□□□□ -0.8
CMTM3-209ENST00000565003 ABCG4Q9H172 646 aa10.07□□□□□ -0.8
CMTM3-209ENST00000565003 SIRPGQ9P1W8 387 aa10.07□□□□□ -0.8
CMTM3-209ENST00000565003 RCOR3Q9P2K3 495 aaPredicted RBP10.07□□□□□ -0.8
CMTM3-209ENST00000565003 KLQ9UEF7 1012 aa10.07□□□□□ -0.8
CMTM3-209ENST00000565003 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.07□□□□□ -0.8
CMTM3-209ENST00000565003 TMEM202A6NGA9 273 aa10.06□□□□□ -0.8
CMTM3-209ENST00000565003 USP12O75317 370 aa10.06□□□□□ -0.8
CMTM3-209ENST00000565003 PROSCO94903 275 aa10.06□□□□□ -0.8
CMTM3-209ENST00000565003 MAP3K6O95382 1288 aa10.06□□□□□ -0.8
CMTM3-209ENST00000565003 CPP00450 1065 aa10.06□□□□□ -0.8
CMTM3-209ENST00000565003 PTMSP20962 102 aa10.06□□□□□ -0.8
CMTM3-209ENST00000565003 LHCGRP22888 699 aa10.06□□□□□ -0.8
CMTM3-209ENST00000565003 ITPKBP27987 946 aa10.06□□□□□ -0.8
CMTM3-209ENST00000565003 EIF2S3P41091 472 aaKnown RBP10.06□□□□□ -0.8
CMTM3-209ENST00000565003 GARSP41250 739 aaKnown RBP10.06□□□□□ -0.8
CMTM3-209ENST00000565003 MMP13P45452 471 aa10.06□□□□□ -0.8
CMTM3-209ENST00000565003 TAS2R40P59535 323 aa10.06□□□□□ -0.8
CMTM3-209ENST00000565003 KIAA1024LP59773 190 aa10.06□□□□□ -0.8
CMTM3-209ENST00000565003 GALNT2Q10471 571 aa10.06□□□□□ -0.8
CMTM3-209ENST00000565003 PTPRRQ15256 657 aa10.06□□□□□ -0.8
CMTM3-209ENST00000565003 SLC18A3Q16572 532 aa10.06□□□□□ -0.8
CMTM3-209ENST00000565003 HADHQ16836 314 aaKnown RBP10.06□□□□□ -0.8
CMTM3-209ENST00000565003 ISXQ2M1V0 245 aa10.06□□□□□ -0.8
CMTM3-209ENST00000565003 ASTE1Q2TB18 679 aaPredicted RBP10.06□□□□□ -0.8
CMTM3-209ENST00000565003 TBC1D25Q3MII6 688 aa10.06□□□□□ -0.8
CMTM3-209ENST00000565003 MARC1Q5VT66 337 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms