RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 MPZL3Q6UWV2 235 aa16.37■□□□□ 0.21
LINC00554-201ENST00000564841 ZPBP2Q6X784 338 aa16.37■□□□□ 0.21
LINC00554-201ENST00000564841 ZMAT2Q96NC0 199 aaKnown RBP16.37■□□□□ 0.21
LINC00554-201ENST00000564841 RAD21L1Q9H4I0 556 aa16.37■□□□□ 0.21
LINC00554-201ENST00000564841 RPF1Q9H9Y2 349 aaKnown RBP16.37■□□□□ 0.21
LINC00554-201ENST00000564841 PSME2Q9UL46 239 aa16.37■□□□□ 0.21
LINC00554-201ENST00000564841 RUVBL2Q9Y230 463 aaKnown RBP16.37■□□□□ 0.21
LINC00554-201ENST00000564841 MAGED1Q9Y5V3 778 aaPredicted RBP16.37■□□□□ 0.21
LINC00554-201ENST00000564841 ACKR2O00590 384 aa16.36■□□□□ 0.21
LINC00554-201ENST00000564841 MRASO14807 208 aa16.36■□□□□ 0.21
LINC00554-201ENST00000564841 YWHAQP27348 245 aa16.36■□□□□ 0.21
LINC00554-201ENST00000564841 LRPAP1P30533 357 aa16.36■□□□□ 0.21
LINC00554-201ENST00000564841 BEX3Q00994 111 aa16.36■□□□□ 0.21
LINC00554-201ENST00000564841 ARL13BQ3SXY8 428 aa16.36■□□□□ 0.21
LINC00554-201ENST00000564841 ZNF280DQ6N043 979 aa16.36■□□□□ 0.21
LINC00554-201ENST00000564841 USP43Q70EL4 1123 aa16.36■□□□□ 0.21
LINC00554-201ENST00000564841 PSD4Q8NDX1 1056 aa16.36■□□□□ 0.21
LINC00554-201ENST00000564841 OR2T34Q8NGX1 318 aa16.36■□□□□ 0.21
LINC00554-201ENST00000564841 OR2T3Q8NH03 318 aa16.36■□□□□ 0.21
LINC00554-201ENST00000564841 MUS81Q96NY9 551 aa16.36■□□□□ 0.21
LINC00554-201ENST00000564841 MIR1-1HGQ9H1L0 117 aa16.36■□□□□ 0.21
LINC00554-201ENST00000564841 CYP4F12Q9HCS2 524 aa16.36■□□□□ 0.21
LINC00554-201ENST00000564841 SCUBE2Q9NQ36 999 aa16.36■□□□□ 0.21
LINC00554-201ENST00000564841 ACOX3O15254 700 aa16.36■□□□□ 0.21
LINC00554-201ENST00000564841 DLX3O60479 287 aa16.36■□□□□ 0.21
LINC00554-201ENST00000564841 TPH1P17752 444 aa16.36■□□□□ 0.21
LINC00554-201ENST00000564841 GARSP41250 739 aaKnown RBP16.36■□□□□ 0.21
LINC00554-201ENST00000564841 RABGGTBP53611 331 aa16.36■□□□□ 0.21
LINC00554-201ENST00000564841 C1QTNF8P60827 252 aa16.36■□□□□ 0.21
LINC00554-201ENST00000564841 MBTD1Q05BQ5 628 aa16.36■□□□□ 0.21
LINC00554-201ENST00000564841 CLEC14AQ86T13 490 aa16.36■□□□□ 0.21
LINC00554-201ENST00000564841 ZNF354CQ86Y25 554 aa16.36■□□□□ 0.21
LINC00554-201ENST00000564841 NT5DC4Q86YG4 428 aa16.36■□□□□ 0.21
LINC00554-201ENST00000564841 CXorf38Q8TB03 319 aa16.36■□□□□ 0.21
LINC00554-201ENST00000564841 HTRA1Q92743 480 aa16.36■□□□□ 0.21
LINC00554-201ENST00000564841 CGREF1Q99674 301 aa16.36■□□□□ 0.21
LINC00554-201ENST00000564841 TINF2Q9BSI4 451 aa16.36■□□□□ 0.21
LINC00554-201ENST00000564841 ADNPQ9H2P0 1102 aa16.36■□□□□ 0.21
LINC00554-201ENST00000564841 NOL6Q9H6R4 1146 aaKnown RBP16.36■□□□□ 0.21
LINC00554-201ENST00000564841 WDR70Q9NW82 654 aa16.36■□□□□ 0.21
LINC00554-201ENST00000564841 KLHL3Q9UH77 587 aa16.36■□□□□ 0.21
LINC00554-201ENST00000564841 ATP11BQ9Y2G3 1177 aa16.36■□□□□ 0.21
LINC00554-201ENST00000564841 CLDN25C9JDP6 229 aa16.35■□□□□ 0.21
LINC00554-201ENST00000564841 STAG3L1P0CL83 205 aa16.35■□□□□ 0.21
LINC00554-201ENST00000564841 IL7RP16871 459 aa16.35■□□□□ 0.21
LINC00554-201ENST00000564841 TGM2P21980 687 aa16.35■□□□□ 0.21
LINC00554-201ENST00000564841 NDST1P52848 882 aa16.35■□□□□ 0.21
LINC00554-201ENST00000564841 PRKAA1Q13131 559 aa16.35■□□□□ 0.21
LINC00554-201ENST00000564841 INAQ16352 499 aa16.35■□□□□ 0.21
LINC00554-201ENST00000564841 LIPMQ5VYY2 423 aa16.35■□□□□ 0.21
LINC00554-201ENST00000564841 CST9Q5W186 159 aa16.35■□□□□ 0.21
LINC00554-201ENST00000564841 XAF1Q6GPH4 301 aa16.35■□□□□ 0.21
LINC00554-201ENST00000564841 PLEKHH3Q7Z736 793 aa16.35■□□□□ 0.21
LINC00554-201ENST00000564841 MFSD2AQ8NA29 543 aa16.35■□□□□ 0.21
LINC00554-201ENST00000564841 TSPAN18Q96SJ8 248 aa16.35■□□□□ 0.21
LINC00554-201ENST00000564841 PDZD7Q9H5P4 517 aa16.35■□□□□ 0.21
LINC00554-201ENST00000564841 PALMDQ9NP74 551 aa16.35■□□□□ 0.21
LINC00554-201ENST00000564841 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.35■□□□□ 0.21
LINC00554-201ENST00000564841 GIMAP2Q9UG22 337 aa16.35■□□□□ 0.21
LINC00554-201ENST00000564841 PPEF2O14830 753 aa16.35■□□□□ 0.21
LINC00554-201ENST00000564841 CLASP2O75122 1294 aaKnown RBP16.35■□□□□ 0.21
LINC00554-201ENST00000564841 BCAS1O75363 584 aaPredicted RBP16.35■□□□□ 0.21
LINC00554-201ENST00000564841 PIGRP01833 764 aa16.35■□□□□ 0.21
LINC00554-201ENST00000564841 NCK1P16333 377 aa16.35■□□□□ 0.21
LINC00554-201ENST00000564841 ARF4P18085 180 aaPredicted RBP16.35■□□□□ 0.21
LINC00554-201ENST00000564841 GPD2P43304 727 aa16.35■□□□□ 0.21
LINC00554-201ENST00000564841 LIMK2P53671 638 aa16.35■□□□□ 0.21
LINC00554-201ENST00000564841 PLA2G16P53816 162 aa16.35■□□□□ 0.21
LINC00554-201ENST00000564841 GRM3Q14832 879 aa16.35■□□□□ 0.21
LINC00554-201ENST00000564841 HERC3Q15034 1050 aa16.35■□□□□ 0.21
LINC00554-201ENST00000564841 TAF1CQ15572 869 aaPredicted RBP16.35■□□□□ 0.21
LINC00554-201ENST00000564841 ILDR2Q71H61 639 aa16.35■□□□□ 0.21
LINC00554-201ENST00000564841 ACOT1Q86TX2 421 aa16.35■□□□□ 0.21
LINC00554-201ENST00000564841 RETREG3Q86VR2 466 aa16.35■□□□□ 0.21
LINC00554-201ENST00000564841 DDIASQ8IXT1 998 aa16.35■□□□□ 0.21
LINC00554-201ENST00000564841 FSTL5Q8N475 847 aaPredicted RBP16.35■□□□□ 0.21
LINC00554-201ENST00000564841 DHRSXQ8N5I4 330 aa16.35■□□□□ 0.21
LINC00554-201ENST00000564841 PNPLA1Q8N8W4 532 aa16.35■□□□□ 0.21
LINC00554-201ENST00000564841 HDAC10Q969S8 669 aa16.35■□□□□ 0.21
LINC00554-201ENST00000564841 ZNF347Q96SE7 839 aa16.35■□□□□ 0.21
LINC00554-201ENST00000564841 OLFM1Q99784 485 aa16.35■□□□□ 0.21
LINC00554-201ENST00000564841 BEGAINQ9BUH8 593 aa16.35■□□□□ 0.21
LINC00554-201ENST00000564841 ALOXE3Q9BYJ1 711 aa16.35■□□□□ 0.21
LINC00554-201ENST00000564841 TP63Q9H3D4 680 aaPredicted RBP16.35■□□□□ 0.21
LINC00554-201ENST00000564841 PIF1Q9H611 641 aa16.35■□□□□ 0.21
LINC00554-201ENST00000564841 ATP13A3Q9H7F0 1226 aa16.35■□□□□ 0.21
LINC00554-201ENST00000564841 DTLQ9NZJ0 730 aa16.35■□□□□ 0.21
LINC00554-201ENST00000564841 MKI67P46013 3256 aaKnown RBP16.35■□□□□ 0.21
LINC00554-201ENST00000564841 DHRS12A0PJE2 317 aa16.35■□□□□ 0.21
LINC00554-201ENST00000564841 MSI1O43347 362 aaKnown RBP16.35■□□□□ 0.21
LINC00554-201ENST00000564841 RSL1D1O76021 490 aaKnown RBP16.35■□□□□ 0.21
LINC00554-201ENST00000564841 SHMT2P34897 504 aa16.35■□□□□ 0.21
LINC00554-201ENST00000564841 SPRP35270 261 aaPredicted RBP16.35■□□□□ 0.21
LINC00554-201ENST00000564841 PLK1P53350 603 aa16.35■□□□□ 0.21
LINC00554-201ENST00000564841 GRTP1Q5TC63 336 aa16.35■□□□□ 0.21
LINC00554-201ENST00000564841 IQSEC1Q6DN90 963 aa16.35■□□□□ 0.21
LINC00554-201ENST00000564841 SLC22A16Q86VW1 577 aa16.35■□□□□ 0.21
LINC00554-201ENST00000564841 CDKL3Q8IVW4 592 aaPredicted RBP16.35■□□□□ 0.21
LINC00554-201ENST00000564841 FAR2Q96K12 515 aa16.35■□□□□ 0.21
LINC00554-201ENST00000564841 CPNE1Q99829 537 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 142.1 ms