RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 PTGR1Q14914 329 aa4.84□□□□□ -1.63
LINC00560-201ENST00000564593 DCAF6Q58WW2 860 aa4.84□□□□□ -1.63
LINC00560-201ENST00000564593 SGO1Q5FBB7 561 aa4.84□□□□□ -1.63
LINC00560-201ENST00000564593 CXorf66Q5JRM2 361 aaPredicted RBP4.84□□□□□ -1.63
LINC00560-201ENST00000564593 GKAP1Q5VSY0 366 aaPredicted RBP4.84□□□□□ -1.63
LINC00560-201ENST00000564593 DCAF12L2Q5VW00 463 aa4.84□□□□□ -1.63
LINC00560-201ENST00000564593 C16orf54Q6UWD8 224 aa4.84□□□□□ -1.63
LINC00560-201ENST00000564593 SZRD1Q7Z422 152 aa4.84□□□□□ -1.63
LINC00560-201ENST00000564593 MRPL10Q7Z7H8 261 aaKnown RBP4.84□□□□□ -1.63
LINC00560-201ENST00000564593 MB21D2Q8IYB1 491 aaPredicted RBP4.84□□□□□ -1.63
LINC00560-201ENST00000564593 SRBD1Q8N5C6 995 aaKnown RBP4.84□□□□□ -1.63
LINC00560-201ENST00000564593 ZNF548Q8NEK5 533 aaPredicted RBP4.84□□□□□ -1.63
LINC00560-201ENST00000564593 HUS1BQ8NHY5 278 aa4.84□□□□□ -1.63
LINC00560-201ENST00000564593 TMEM163Q8TC26 289 aa4.84□□□□□ -1.63
LINC00560-201ENST00000564593 GPT2Q8TD30 523 aa4.84□□□□□ -1.63
LINC00560-201ENST00000564593 RPL36ALQ969Q0 106 aaKnown RBP4.84□□□□□ -1.63
LINC00560-201ENST00000564593 C1orf74Q96LT6 269 aa4.84□□□□□ -1.63
LINC00560-201ENST00000564593 ZNF570Q96NI8 536 aa4.84□□□□□ -1.63
LINC00560-201ENST00000564593 MSTO1Q9BUK6 570 aa4.84□□□□□ -1.63
LINC00560-201ENST00000564593 SPRTNQ9H040 489 aaPredicted RBP4.84□□□□□ -1.63
LINC00560-201ENST00000564593 CYSLTR2Q9NS75 346 aa4.84□□□□□ -1.63
LINC00560-201ENST00000564593 MTMR6Q9Y217 621 aa4.84□□□□□ -1.63
LINC00560-201ENST00000564593 IGLV5-39A0A0G2JS06 123 aa4.83□□□□□ -1.64
LINC00560-201ENST00000564593 AGAP14A8MT82 685 aa4.83□□□□□ -1.64
LINC00560-201ENST00000564593 NKX2-2O95096 273 aa4.83□□□□□ -1.64
LINC00560-201ENST00000564593 PORP16435 677 aaPredicted RBP4.83□□□□□ -1.64
LINC00560-201ENST00000564593 ZNF182P17025 639 aaPredicted RBP4.83□□□□□ -1.64
LINC00560-201ENST00000564593 ACTN2P35609 894 aa4.83□□□□□ -1.64
LINC00560-201ENST00000564593 PSMB10P40306 273 aa4.83□□□□□ -1.64
LINC00560-201ENST00000564593 CDH8P55286 799 aa4.83□□□□□ -1.64
LINC00560-201ENST00000564593 P2RX3P56373 397 aa4.83□□□□□ -1.64
LINC00560-201ENST00000564593 C21orf58P58505 322 aa4.83□□□□□ -1.64
LINC00560-201ENST00000564593 SORDQ00796 357 aa4.83□□□□□ -1.64
LINC00560-201ENST00000564593 ACVR2BQ13705 512 aa4.83□□□□□ -1.64
LINC00560-201ENST00000564593 KLF9Q13886 244 aaPredicted RBP4.83□□□□□ -1.64
LINC00560-201ENST00000564593 SHBQ15464 509 aa4.83□□□□□ -1.64
LINC00560-201ENST00000564593 DUSP28Q4G0W2 176 aa4.83□□□□□ -1.64
LINC00560-201ENST00000564593 CHST9Q7L1S5 443 aa4.83□□□□□ -1.64
LINC00560-201ENST00000564593 PATL1Q86TB9 770 aaKnown RBP4.83□□□□□ -1.64
LINC00560-201ENST00000564593 HAPLN4Q86UW8 402 aa4.83□□□□□ -1.64
LINC00560-201ENST00000564593 SFTPA2Q8IWL1 248 aa4.83□□□□□ -1.64
LINC00560-201ENST00000564593 SLC35F3Q8IY50 421 aa4.83□□□□□ -1.64
LINC00560-201ENST00000564593 ZBTB2Q8N680 514 aa4.83□□□□□ -1.64
LINC00560-201ENST00000564593 BEST2Q8NFU1 509 aa4.83□□□□□ -1.64
LINC00560-201ENST00000564593 SLC25A28Q96A46 364 aa4.83□□□□□ -1.64
LINC00560-201ENST00000564593 TMEM68Q96MH6 324 aa4.83□□□□□ -1.64
LINC00560-201ENST00000564593 NLRP4Q96MN2 994 aa4.83□□□□□ -1.64
LINC00560-201ENST00000564593 SLITRK1Q96PX8 696 aa4.83□□□□□ -1.64
LINC00560-201ENST00000564593 RANGRFQ9HD47 186 aaPredicted RBP4.83□□□□□ -1.64
LINC00560-201ENST00000564593 CISD1Q9NZ45 108 aaKnown RBP4.83□□□□□ -1.64
LINC00560-201ENST00000564593 NFE2L3Q9Y4A8 694 aa4.83□□□□□ -1.64
LINC00560-201ENST00000564593 CEPT1Q9Y6K0 416 aa4.83□□□□□ -1.64
LINC00560-201ENST00000564593 WDR91A4D1P6 747 aa4.82□□□□□ -1.64
LINC00560-201ENST00000564593 BTBD18B2RXH4 712 aa4.82□□□□□ -1.64
LINC00560-201ENST00000564593 H0YGN5 161 aa4.82□□□□□ -1.64
LINC00560-201ENST00000564593 LDB2O43679 373 aa4.82□□□□□ -1.64
LINC00560-201ENST00000564593 NDUFS3O75489 264 aa4.82□□□□□ -1.64
LINC00560-201ENST00000564593 SLC25A12O75746 678 aa4.82□□□□□ -1.64
LINC00560-201ENST00000564593 OR2C1O95371 312 aa4.82□□□□□ -1.64
LINC00560-201ENST00000564593 SYF2O95926 243 aaKnown RBP4.82□□□□□ -1.64
LINC00560-201ENST00000564593 MMP2P08253 660 aa4.82□□□□□ -1.64
LINC00560-201ENST00000564593 CLTBP09497 229 aa4.82□□□□□ -1.64
LINC00560-201ENST00000564593 CSH1P0DML2 217 aa4.82□□□□□ -1.64
LINC00560-201ENST00000564593 CSH2P0DML3 217 aa4.82□□□□□ -1.64
LINC00560-201ENST00000564593 MCM3P25205 808 aa4.82□□□□□ -1.64
LINC00560-201ENST00000564593 UBA7P41226 1012 aa4.82□□□□□ -1.64
LINC00560-201ENST00000564593 GARSP41250 739 aaKnown RBP4.82□□□□□ -1.64
LINC00560-201ENST00000564593 LAMB3Q13751 1172 aa4.82□□□□□ -1.64
LINC00560-201ENST00000564593 GPR18Q14330 331 aa4.82□□□□□ -1.64
LINC00560-201ENST00000564593 CFAP58Q5T655 872 aa4.82□□□□□ -1.64
LINC00560-201ENST00000564593 QSOX2Q6ZRP7 698 aa4.82□□□□□ -1.64
LINC00560-201ENST00000564593 MON1BQ7L1V2 547 aa4.82□□□□□ -1.64
LINC00560-201ENST00000564593 CTU1Q7Z7A3 348 aaKnown RBP4.82□□□□□ -1.64
LINC00560-201ENST00000564593 CCDC13Q8IYE1 715 aa4.82□□□□□ -1.64
LINC00560-201ENST00000564593 ADGRF2Q8IZF7 708 aa4.82□□□□□ -1.64
LINC00560-201ENST00000564593 C17orf53Q8N3J3 647 aaPredicted RBP4.82□□□□□ -1.64
LINC00560-201ENST00000564593 C7orf57Q8NEG2 295 aa4.82□□□□□ -1.64
LINC00560-201ENST00000564593 ZKSCAN4Q969J2 545 aaPredicted RBP4.82□□□□□ -1.64
LINC00560-201ENST00000564593 ARHGEF26Q96DR7 871 aa4.82□□□□□ -1.64
LINC00560-201ENST00000564593 CALML4Q96GE6 196 aa4.82□□□□□ -1.64
LINC00560-201ENST00000564593 VCPIP1Q96JH7 1222 aa4.82□□□□□ -1.64
LINC00560-201ENST00000564593 NCAPGQ9BPX3 1015 aa4.82□□□□□ -1.64
LINC00560-201ENST00000564593 C1QTNF5Q9BXJ0 243 aa4.82□□□□□ -1.64
LINC00560-201ENST00000564593 FOXP1Q9H334 677 aaPredicted RBP4.82□□□□□ -1.64
LINC00560-201ENST00000564593 DDX4Q9NQI0 724 aaKnown RBP4.82□□□□□ -1.64
LINC00560-201ENST00000564593 SRPRBQ9Y5M8 271 aaKnown RBP4.82□□□□□ -1.64
LINC00560-201ENST00000564593 RAI2Q9Y5P3 530 aa4.82□□□□□ -1.64
LINC00560-201ENST00000564593 SESN1Q9Y6P5 492 aa4.82□□□□□ -1.64
LINC00560-201ENST00000564593 KDM4EB2RXH2 506 aaPredicted RBP4.82□□□□□ -1.64
LINC00560-201ENST00000564593 GJB3O75712 270 aa4.82□□□□□ -1.64
LINC00560-201ENST00000564593 CYP1A2P05177 515 aa4.82□□□□□ -1.64
LINC00560-201ENST00000564593 FGF2P09038 288 aa4.82□□□□□ -1.64
LINC00560-201ENST00000564593 TMEM191BP0C7N4 346 aa4.82□□□□□ -1.64
LINC00560-201ENST00000564593 ARSBP15848 533 aa4.82□□□□□ -1.64
LINC00560-201ENST00000564593 TBXAS1P24557 533 aaPredicted RBP4.82□□□□□ -1.64
LINC00560-201ENST00000564593 THPOP40225 353 aa4.82□□□□□ -1.64
LINC00560-201ENST00000564593 ENTPD1P49961 510 aa4.82□□□□□ -1.64
LINC00560-201ENST00000564593 SNX16P57768 344 aa4.82□□□□□ -1.64
LINC00560-201ENST00000564593 NAE1Q13564 534 aa4.82□□□□□ -1.64
LINC00560-201ENST00000564593 ETFDHQ16134 617 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms