RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 TRAFD1O14545 582 aaPredicted RBP16.68■□□□□ 0.26
CDT1-202ENST00000562747 WNT9AO14904 365 aa16.68■□□□□ 0.26
CDT1-202ENST00000562747 PPP1R12AO14974 1030 aaPredicted RBP16.68■□□□□ 0.26
CDT1-202ENST00000562747 WNT1P04628 370 aa16.68■□□□□ 0.26
CDT1-202ENST00000562747 CCNB1P14635 433 aa16.68■□□□□ 0.26
CDT1-202ENST00000562747 PRLRP16471 622 aa16.68■□□□□ 0.26
CDT1-202ENST00000562747 CES1P23141 567 aa16.68■□□□□ 0.26
CDT1-202ENST00000562747 CTNNA2P26232 953 aa16.68■□□□□ 0.26
CDT1-202ENST00000562747 MARCKSL1P49006 195 aa16.68■□□□□ 0.26
CDT1-202ENST00000562747 COPS2P61201 443 aa16.68■□□□□ 0.26
CDT1-202ENST00000562747 MAXP61244 160 aa16.68■□□□□ 0.26
CDT1-202ENST00000562747 POLR2LP62875 67 aaKnown RBP16.68■□□□□ 0.26
CDT1-202ENST00000562747 PPP2R5EQ16537 467 aa16.68■□□□□ 0.26
CDT1-202ENST00000562747 TMEM52BQ4KMG9 183 aa16.68■□□□□ 0.26
CDT1-202ENST00000562747 PRAMEF14Q5SWL7 426 aa16.68■□□□□ 0.26
CDT1-202ENST00000562747 ALG1LQ6GMV1 187 aa16.68■□□□□ 0.26
CDT1-202ENST00000562747 ERAP2Q6P179 960 aa16.68■□□□□ 0.26
CDT1-202ENST00000562747 LRRC8AQ8IWT6 810 aa16.68■□□□□ 0.26
CDT1-202ENST00000562747 SYCE1Q8N0S2 351 aa16.68■□□□□ 0.26
CDT1-202ENST00000562747 CXorf40AQ8TE69 158 aa16.68■□□□□ 0.26
CDT1-202ENST00000562747 KLK6Q92876 244 aa16.68■□□□□ 0.26
CDT1-202ENST00000562747 NSMCE3Q96MG7 304 aa16.68■□□□□ 0.26
CDT1-202ENST00000562747 OLFM3Q96PB7 478 aa16.68■□□□□ 0.26
CDT1-202ENST00000562747 C1QTNF2Q9BXJ5 285 aa16.68■□□□□ 0.26
CDT1-202ENST00000562747 TSGA10Q9BZW7 698 aa16.68■□□□□ 0.26
CDT1-202ENST00000562747 FTSJ1Q9UET6 329 aa16.68■□□□□ 0.26
CDT1-202ENST00000562747 GGT7Q9UJ14 662 aa16.68■□□□□ 0.26
CDT1-202ENST00000562747 ITM2BQ9Y287 266 aa16.68■□□□□ 0.26
CDT1-202ENST00000562747 ADGRG1Q9Y653 693 aa16.68■□□□□ 0.26
CDT1-202ENST00000562747 URB1O60287 2271 aaKnown RBP16.68■□□□□ 0.26
CDT1-202ENST00000562747 TRPM6Q9BX84 2022 aa16.67■□□□□ 0.26
CDT1-202ENST00000562747 hCG_1818297A0A087WSY0 165 aa16.67■□□□□ 0.26
CDT1-202ENST00000562747 A0A087WV48 116 aa16.67■□□□□ 0.26
CDT1-202ENST00000562747 A0A1B0GTQ1 180 aa16.67■□□□□ 0.26
CDT1-202ENST00000562747 MACROD2A1Z1Q3 448 aa16.67■□□□□ 0.26
CDT1-202ENST00000562747 IGLON5A6NGN9 336 aa16.67■□□□□ 0.26
CDT1-202ENST00000562747 TLR4O00206 839 aa16.67■□□□□ 0.26
CDT1-202ENST00000562747 RIOK3O14730 519 aaKnown RBP16.67■□□□□ 0.26
CDT1-202ENST00000562747 HTRA2O43464 458 aaPredicted RBP16.67■□□□□ 0.26
CDT1-202ENST00000562747 DFNA5O60443 496 aa16.67■□□□□ 0.26
CDT1-202ENST00000562747 CST8O60676 142 aa16.67■□□□□ 0.26
CDT1-202ENST00000562747 NEBLO76041 1014 aa16.67■□□□□ 0.26
CDT1-202ENST00000562747 PAK4O96013 591 aaPredicted RBP16.67■□□□□ 0.26
CDT1-202ENST00000562747 KRT10P13645 584 aa16.67■□□□□ 0.26
CDT1-202ENST00000562747 TGM2P21980 687 aa16.67■□□□□ 0.26
CDT1-202ENST00000562747 DYNLT1P63172 113 aa16.67■□□□□ 0.26
CDT1-202ENST00000562747 SGCGQ13326 291 aa16.67■□□□□ 0.26
CDT1-202ENST00000562747 FGL2Q14314 439 aa16.67■□□□□ 0.26
CDT1-202ENST00000562747 SHBQ15464 509 aa16.67■□□□□ 0.26
CDT1-202ENST00000562747 LRRC73Q5JTD7 316 aa16.67■□□□□ 0.26
CDT1-202ENST00000562747 NPNTQ6UXI9 565 aa16.67■□□□□ 0.26
CDT1-202ENST00000562747 ZSWIM9Q86XI8 627 aa16.67■□□□□ 0.26
CDT1-202ENST00000562747 CCDC50Q8IVM0 306 aa16.67■□□□□ 0.26
CDT1-202ENST00000562747 DENND6BQ8NEG7 585 aa16.67■□□□□ 0.26
CDT1-202ENST00000562747 LENG8Q96PV6 779 aaPredicted RBP16.67■□□□□ 0.26
CDT1-202ENST00000562747 LGMNQ99538 433 aa16.67■□□□□ 0.26
CDT1-202ENST00000562747 NOD2Q9HC29 1040 aa16.67■□□□□ 0.26
CDT1-202ENST00000562747 PCDH12Q9NPG4 1184 aa16.67■□□□□ 0.26
CDT1-202ENST00000562747 RBM22Q9NW64 420 aaKnown RBP eCLIP16.67■□□□□ 0.267e-7■■■■□ 21.6
CDT1-202ENST00000562747 TRIM10Q9UDY6 481 aa16.67■□□□□ 0.26
CDT1-202ENST00000562747 ATP8A1Q9Y2Q0 1164 aa16.67■□□□□ 0.26
CDT1-202ENST00000562747 HS3ST3A1Q9Y663 406 aa16.67■□□□□ 0.26
CDT1-202ENST00000562747 DOCK9Q9BZ29 2069 aa16.66■□□□□ 0.26
CDT1-202ENST00000562747 BPTFQ12830 3046 aa16.66■□□□□ 0.26
CDT1-202ENST00000562747 A0A0U1RQJ8 604 aa16.66■□□□□ 0.26
CDT1-202ENST00000562747 TTC24A2A3L6 582 aaPredicted RBP16.66■□□□□ 0.26
CDT1-202ENST00000562747 CFAP69A5D8W1 941 aa16.66■□□□□ 0.26
CDT1-202ENST00000562747 NRDCO43847 1150 aa16.66■□□□□ 0.26
CDT1-202ENST00000562747 TM7SF2O76062 418 aa16.66■□□□□ 0.26
CDT1-202ENST00000562747 RWDD2BP57060 319 aa16.66■□□□□ 0.26
CDT1-202ENST00000562747 NXPH1P58417 271 aa16.66■□□□□ 0.26
CDT1-202ENST00000562747 IFI35P80217 286 aaPredicted RBP16.66■□□□□ 0.26
CDT1-202ENST00000562747 ITKQ08881 620 aa16.66■□□□□ 0.26
CDT1-202ENST00000562747 DNAJC3Q13217 504 aa16.66■□□□□ 0.26
CDT1-202ENST00000562747 KAZNQ674X7 775 aa16.66■□□□□ 0.26
CDT1-202ENST00000562747 NT5DC3Q86UY8 548 aa16.66■□□□□ 0.26
CDT1-202ENST00000562747 RNF10Q8N5U6 811 aaKnown RBP16.66■□□□□ 0.26
CDT1-202ENST00000562747 PAF1Q8N7H5 531 aa16.66■□□□□ 0.26
CDT1-202ENST00000562747 PDCD7Q8N8D1 485 aaKnown RBP16.66■□□□□ 0.26
CDT1-202ENST00000562747 IL12RB2Q99665 862 aa16.66■□□□□ 0.26
CDT1-202ENST00000562747 SEMA3CQ99985 751 aa16.66■□□□□ 0.26
CDT1-202ENST00000562747 FZD3Q9NPG1 666 aa16.66■□□□□ 0.26
CDT1-202ENST00000562747 GDF3Q9NR23 364 aa16.66■□□□□ 0.26
CDT1-202ENST00000562747 AMFRQ9UKV5 643 aa16.66■□□□□ 0.26
CDT1-202ENST00000562747 EFR3BQ9Y2G0 817 aa16.66■□□□□ 0.26
CDT1-202ENST00000562747 PCDHGC4Q9Y5F7 938 aa16.66■□□□□ 0.26
CDT1-202ENST00000562747 KRT86O43790 486 aa16.65■□□□□ 0.26
CDT1-202ENST00000562747 HLA-DQB2P05538 268 aa16.65■□□□□ 0.26
CDT1-202ENST00000562747 ITIH2P19823 946 aa16.65■□□□□ 0.26
CDT1-202ENST00000562747 NFKBIAP25963 317 aa16.65■□□□□ 0.26
CDT1-202ENST00000562747 PTPN7P35236 360 aa16.65■□□□□ 0.26
CDT1-202ENST00000562747 MMP12P39900 470 aa16.65■□□□□ 0.26
CDT1-202ENST00000562747 PEX5P50542 639 aa16.65■□□□□ 0.26
CDT1-202ENST00000562747 AP1B1Q10567 949 aa16.65■□□□□ 0.26
CDT1-202ENST00000562747 GCNT7Q6ZNI0 430 aa16.65■□□□□ 0.26
CDT1-202ENST00000562747 PEX26Q7Z412 305 aa16.65■□□□□ 0.26
CDT1-202ENST00000562747 ABI3BPQ7Z7G0 1075 aa16.65■□□□□ 0.26
CDT1-202ENST00000562747 OXR1Q8N573 874 aa16.65■□□□□ 0.26
CDT1-202ENST00000562747 LRRN4Q8WUT4 740 aa16.65■□□□□ 0.26
CDT1-202ENST00000562747 P3H4Q92791 437 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms