RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 BLOC1S4Q9NUP1 217 aa5.4□□□□□ -1.54
HERC1-213ENST00000561359 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.4□□□□□ -1.54
HERC1-213ENST00000561359 CRIM1Q9NZV1 1036 aa5.4□□□□□ -1.54
HERC1-213ENST00000561359 APPL1Q9UKG1 709 aa5.4□□□□□ -1.54
HERC1-213ENST00000561359 PILRAQ9UKJ1 303 aa5.4□□□□□ -1.54
HERC1-213ENST00000561359 POLHQ9Y253 713 aa5.4□□□□□ -1.54
HERC1-213ENST00000561359 MRPS18BQ9Y676 258 aaKnown RBP5.4□□□□□ -1.54
HERC1-213ENST00000561359 MAP1AP78559 2803 aaPredicted RBP5.4□□□□□ -1.55
HERC1-213ENST00000561359 STAB1Q9NY15 2570 aa5.39□□□□□ -1.55
HERC1-213ENST00000561359 CSPG4Q6UVK1 2322 aa5.39□□□□□ -1.55
HERC1-213ENST00000561359 ANKUB1A6NFN9 424 aa5.39□□□□□ -1.55
HERC1-213ENST00000561359 ALOX15BO15296 676 aa5.39□□□□□ -1.55
HERC1-213ENST00000561359 INPP4BO15327 924 aa5.39□□□□□ -1.55
HERC1-213ENST00000561359 ACSL4O60488 711 aa5.39□□□□□ -1.55
HERC1-213ENST00000561359 DNAJB5O75953 348 aa5.39□□□□□ -1.55
HERC1-213ENST00000561359 LUC7L3O95232 432 aaKnown RBP5.39□□□□□ -1.55
HERC1-213ENST00000561359 CPNE6O95741 557 aa5.39□□□□□ -1.55
HERC1-213ENST00000561359 ZBED1O96006 694 aa5.39□□□□□ -1.55
HERC1-213ENST00000561359 SNRPB2P08579 225 aaKnown RBP5.39□□□□□ -1.55
HERC1-213ENST00000561359 PDGFRAP16234 1089 aa5.39□□□□□ -1.55
HERC1-213ENST00000561359 GAP43P17677 238 aa5.39□□□□□ -1.55
HERC1-213ENST00000561359 NME2P22392 152 aa5.39□□□□□ -1.55
HERC1-213ENST00000561359 BLKP51451 505 aa5.39□□□□□ -1.55
HERC1-213ENST00000561359 CASP5P51878 434 aa5.39□□□□□ -1.55
HERC1-213ENST00000561359 PMS2P54278 862 aa5.39□□□□□ -1.55
HERC1-213ENST00000561359 PER3P56645 1201 aa5.39□□□□□ -1.55
HERC1-213ENST00000561359 SULT2A1Q06520 285 aa5.39□□□□□ -1.55
HERC1-213ENST00000561359 CYP24A1Q07973 514 aa5.39□□□□□ -1.55
HERC1-213ENST00000561359 ABHD18Q0P651 414 aa5.39□□□□□ -1.55
HERC1-213ENST00000561359 PSMD6Q15008 389 aa5.39□□□□□ -1.55
HERC1-213ENST00000561359 ANKRD1Q15327 319 aa5.39□□□□□ -1.55
HERC1-213ENST00000561359 DLG2Q15700 870 aa5.39□□□□□ -1.55
HERC1-213ENST00000561359 SNRNP35Q16560 246 aaKnown RBP5.39□□□□□ -1.55
HERC1-213ENST00000561359 ME3Q16798 604 aa5.39□□□□□ -1.55
HERC1-213ENST00000561359 CERCAMQ5T4B2 595 aa5.39□□□□□ -1.55
HERC1-213ENST00000561359 KIAA1161Q6NSJ0 714 aa5.39□□□□□ -1.55
HERC1-213ENST00000561359 ERN2Q76MJ5 926 aaKnown RBP5.39□□□□□ -1.55
HERC1-213ENST00000561359 ZNF765Q7L2R6 523 aa5.39□□□□□ -1.55
HERC1-213ENST00000561359 RD3Q7Z3Z2 195 aa5.39□□□□□ -1.55
HERC1-213ENST00000561359 UNC93AQ86WB7 457 aa5.39□□□□□ -1.55
HERC1-213ENST00000561359 GKN2Q86XP6 184 aa5.39□□□□□ -1.55
HERC1-213ENST00000561359 XYLT1Q86Y38 959 aa5.39□□□□□ -1.55
HERC1-213ENST00000561359 HID1Q8IV36 788 aa5.39□□□□□ -1.55
HERC1-213ENST00000561359 SMYD4Q8IYR2 804 aaPredicted RBP5.39□□□□□ -1.55
HERC1-213ENST00000561359 AGBL5Q8NDL9 886 aa5.39□□□□□ -1.55
HERC1-213ENST00000561359 NDRG1Q92597 394 aaKnown RBP5.39□□□□□ -1.55
HERC1-213ENST00000561359 LARP4BQ92615 738 aaKnown RBP5.39□□□□□ -1.55
HERC1-213ENST00000561359 MYEOVQ96EZ4 313 aa5.39□□□□□ -1.55
HERC1-213ENST00000561359 PKNOX2Q96KN3 472 aa5.39□□□□□ -1.55
HERC1-213ENST00000561359 CCDC74BQ96LY2 380 aa5.39□□□□□ -1.55
HERC1-213ENST00000561359 PRICKLE1Q96MT3 831 aaPredicted RBP5.39□□□□□ -1.55
HERC1-213ENST00000561359 DUSP16Q9BY84 665 aa5.39□□□□□ -1.55
HERC1-213ENST00000561359 CEP44Q9C0F1 390 aa5.39□□□□□ -1.55
HERC1-213ENST00000561359 GSX1Q9H4S2 264 aaPredicted RBP5.39□□□□□ -1.55
HERC1-213ENST00000561359 LRIT1Q9P2V4 623 aa5.39□□□□□ -1.55
HERC1-213ENST00000561359 SLC25A13Q9UJS0 675 aa5.39□□□□□ -1.55
HERC1-213ENST00000561359 PNMA8BQ9ULN7 279 aaPredicted RBP5.39□□□□□ -1.55
HERC1-213ENST00000561359 TRPM6Q9BX84 2022 aa5.38□□□□□ -1.55
HERC1-213ENST00000561359 IGHV5-10-1A0A0J9YXX1 117 aa5.38□□□□□ -1.55
HERC1-213ENST00000561359 A6NCN8 305 aa5.38□□□□□ -1.55
HERC1-213ENST00000561359 IGLON5A6NGN9 336 aa5.38□□□□□ -1.55
HERC1-213ENST00000561359 NEMP1O14524 444 aa5.38□□□□□ -1.55
HERC1-213ENST00000561359 SLC26A4O43511 780 aa5.38□□□□□ -1.55
HERC1-213ENST00000561359 KRT86O43790 486 aa5.38□□□□□ -1.55
HERC1-213ENST00000561359 FBXO24O75426 580 aa5.38□□□□□ -1.55
HERC1-213ENST00000561359 LRCH4O75427 683 aa5.38□□□□□ -1.55
HERC1-213ENST00000561359 FAM155BO75949 473 aa5.38□□□□□ -1.55
HERC1-213ENST00000561359 CBX6O95503 412 aa5.38□□□□□ -1.55
HERC1-213ENST00000561359 CTSLP07711 333 aa5.38□□□□□ -1.55
HERC1-213ENST00000561359 ALDH4A1P30038 563 aa5.38□□□□□ -1.55
HERC1-213ENST00000561359 CHRNA3P32297 505 aa5.38□□□□□ -1.55
HERC1-213ENST00000561359 PTGER4P35408 488 aa5.38□□□□□ -1.55
HERC1-213ENST00000561359 CYP2J2P51589 502 aa5.38□□□□□ -1.55
HERC1-213ENST00000561359 TKTL1P51854 596 aa5.38□□□□□ -1.55
HERC1-213ENST00000561359 HK3P52790 923 aa5.38□□□□□ -1.55
HERC1-213ENST00000561359 SLC8A3P57103 927 aa5.38□□□□□ -1.55
HERC1-213ENST00000561359 PFN3P60673 137 aa5.38□□□□□ -1.55
HERC1-213ENST00000561359 NUCB2P80303 420 aa5.38□□□□□ -1.55
HERC1-213ENST00000561359 ALCAMQ13740 583 aa5.38□□□□□ -1.55
HERC1-213ENST00000561359 ZRSR2Q15696 482 aaKnown RBP5.38□□□□□ -1.55
HERC1-213ENST00000561359 EDRF1Q3B7T1 1238 aa5.38□□□□□ -1.55
HERC1-213ENST00000561359 CYP27C1Q4G0S4 372 aa5.38□□□□□ -1.55
HERC1-213ENST00000561359 C14orf28Q4W4Y0 310 aa5.38□□□□□ -1.55
HERC1-213ENST00000561359 BSPRYQ5W0U4 402 aa5.38□□□□□ -1.55
HERC1-213ENST00000561359 ANKS6Q68DC2 871 aa5.38□□□□□ -1.55
HERC1-213ENST00000561359 MCTP1Q6DN14 999 aa5.38□□□□□ -1.55
HERC1-213ENST00000561359 NADSYN1Q6IA69 706 aa5.38□□□□□ -1.55
HERC1-213ENST00000561359 SKAP1Q86WV1 359 aa5.38□□□□□ -1.55
HERC1-213ENST00000561359 LGI2Q8N0V4 545 aa5.38□□□□□ -1.55
HERC1-213ENST00000561359 FAM46DQ8NEK8 389 aa5.38□□□□□ -1.55
HERC1-213ENST00000561359 GPR156Q8NFN8 814 aa5.38□□□□□ -1.55
HERC1-213ENST00000561359 FBXO18Q8NFZ0 1043 aa5.38□□□□□ -1.55
HERC1-213ENST00000561359 GRIN3AQ8TCU5 1115 aa5.38□□□□□ -1.55
HERC1-213ENST00000561359 STK35Q8TDR2 534 aa5.38□□□□□ -1.55
HERC1-213ENST00000561359 ERCC4Q92889 916 aaPredicted RBP5.38□□□□□ -1.55
HERC1-213ENST00000561359 C19orf60Q96EN9 201 aa5.38□□□□□ -1.55
HERC1-213ENST00000561359 PPP1R16AQ96I34 528 aa5.38□□□□□ -1.55
HERC1-213ENST00000561359 CCDC114Q96M63 670 aa5.38□□□□□ -1.55
HERC1-213ENST00000561359 AK8Q96MA6 479 aa5.38□□□□□ -1.55
HERC1-213ENST00000561359 IPO9Q96P70 1041 aaKnown RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms