RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 LHCGRP22888 699 aa21.77■■□□□ 1.08
SNX1-206ENST00000559389 VIPR1P32241 457 aa21.77■■□□□ 1.08
SNX1-206ENST00000559389 FDFT1P37268 417 aa21.77■■□□□ 1.08
SNX1-206ENST00000559389 RPS21P63220 83 aaKnown RBP21.77■■□□□ 1.08
SNX1-206ENST00000559389 FAM193AP78312 1265 aa21.77■■□□□ 1.08
SNX1-206ENST00000559389 SEMG2Q02383 582 aa21.77■■□□□ 1.08
SNX1-206ENST00000559389 ZNF284Q2VY69 593 aa21.77■■□□□ 1.08
SNX1-206ENST00000559389 LAIR1Q6GTX8 287 aa21.77■■□□□ 1.08
SNX1-206ENST00000559389 C4orf22Q6V702 233 aa21.77■■□□□ 1.08
SNX1-206ENST00000559389 KDELC2Q7Z4H8 507 aa21.77■■□□□ 1.08
SNX1-206ENST00000559389 TAB3Q8N5C8 712 aaPredicted RBP21.77■■□□□ 1.08
SNX1-206ENST00000559389 CXorf40AQ8TE69 158 aa21.77■■□□□ 1.08
SNX1-206ENST00000559389 GRK7Q8WTQ7 553 aa21.77■■□□□ 1.08
SNX1-206ENST00000559389 DNASE2BQ8WZ79 361 aa21.77■■□□□ 1.08
SNX1-206ENST00000559389 SNX19Q92543 992 aa21.77■■□□□ 1.08
SNX1-206ENST00000559389 SLCO2A1Q92959 643 aa21.77■■□□□ 1.08
SNX1-206ENST00000559389 SMIM14Q96QK8 99 aa21.77■■□□□ 1.08
SNX1-206ENST00000559389 LYSMD1Q96S90 227 aa21.77■■□□□ 1.08
SNX1-206ENST00000559389 ORAI3Q9BRQ5 295 aa21.77■■□□□ 1.08
SNX1-206ENST00000559389 WRAP53Q9BUR4 548 aaKnown RBP21.77■■□□□ 1.08
SNX1-206ENST00000559389 FICDQ9BVA6 458 aa21.77■■□□□ 1.08
SNX1-206ENST00000559389 GOLGA6AQ9NYA3 693 aa21.77■■□□□ 1.08
SNX1-206ENST00000559389 CDC23Q9UJX2 597 aa21.77■■□□□ 1.08
SNX1-206ENST00000559389 NEU2Q9Y3R4 380 aa21.77■■□□□ 1.08
SNX1-206ENST00000559389 SPAG17Q6Q759 2223 aa21.77■■□□□ 1.08
SNX1-206ENST00000559389 ANKRD66B4E2M5 251 aa21.76■■□□□ 1.07
SNX1-206ENST00000559389 PLXNA2O75051 1894 aa21.76■■□□□ 1.07
SNX1-206ENST00000559389 EPN2O95208 641 aa21.76■■□□□ 1.07
SNX1-206ENST00000559389 ECEL1O95672 775 aa21.76■■□□□ 1.07
SNX1-206ENST00000559389 GAS8O95995 478 aa21.76■■□□□ 1.07
SNX1-206ENST00000559389 CYP2A6P11509 494 aaPredicted RBP21.76■■□□□ 1.07
SNX1-206ENST00000559389 HLA-DPA1P20036 260 aa21.76■■□□□ 1.07
SNX1-206ENST00000559389 ADRA1AP35348 466 aa21.76■■□□□ 1.07
SNX1-206ENST00000559389 HNF1BP35680 557 aa21.76■■□□□ 1.07
SNX1-206ENST00000559389 CHRNA4P43681 627 aa21.76■■□□□ 1.07
SNX1-206ENST00000559389 SEMA5AQ13591 1074 aa21.76■■□□□ 1.07
SNX1-206ENST00000559389 PTPRRQ15256 657 aa21.76■■□□□ 1.07
SNX1-206ENST00000559389 ZNF572Q7Z3I7 529 aaPredicted RBP21.76■■□□□ 1.07
SNX1-206ENST00000559389 KIF18AQ8NI77 898 aa21.76■■□□□ 1.07
SNX1-206ENST00000559389 RMDN1Q96DB5 314 aa21.76■■□□□ 1.07
SNX1-206ENST00000559389 ETNK1Q9HBU6 452 aa21.76■■□□□ 1.07
SNX1-206ENST00000559389 RAB6BQ9NRW1 208 aa21.76■■□□□ 1.07
SNX1-206ENST00000559389 PCYOX1Q9UHG3 505 aa21.76■■□□□ 1.07
SNX1-206ENST00000559389 ABCA7Q8IZY2 2146 aa21.76■■□□□ 1.07
SNX1-206ENST00000559389 HEXIM1O94992 359 aaKnown RBP21.75■■□□□ 1.07
SNX1-206ENST00000559389 AP2A1O95782 977 aa21.75■■□□□ 1.07
SNX1-206ENST00000559389 FGF1P05230 155 aa21.75■■□□□ 1.07
SNX1-206ENST00000559389 C6P13671 934 aa21.75■■□□□ 1.07
SNX1-206ENST00000559389 ITPKAP23677 461 aa21.75■■□□□ 1.07
SNX1-206ENST00000559389 CD27P26842 260 aa21.75■■□□□ 1.07
SNX1-206ENST00000559389 MAT2AP31153 395 aaKnown RBP21.75■■□□□ 1.07
SNX1-206ENST00000559389 NUDT1P36639 197 aa21.75■■□□□ 1.07
SNX1-206ENST00000559389 TNNT3P45378 269 aaPredicted RBP21.75■■□□□ 1.07
SNX1-206ENST00000559389 CKAP4Q07065 602 aaKnown RBP21.75■■□□□ 1.07
SNX1-206ENST00000559389 FGL2Q14314 439 aa21.75■■□□□ 1.07
SNX1-206ENST00000559389 SLC1A5Q15758 541 aa21.75■■□□□ 1.07
SNX1-206ENST00000559389 CNGA3Q16281 694 aa21.75■■□□□ 1.07
SNX1-206ENST00000559389 KCTD19Q17RG1 926 aaPredicted RBP21.75■■□□□ 1.07
SNX1-206ENST00000559389 SETMARQ53H47 684 aaPredicted RBP21.75■■□□□ 1.07
SNX1-206ENST00000559389 SIRPB2Q5JXA9 342 aa21.75■■□□□ 1.07
SNX1-206ENST00000559389 WDR45BQ5MNZ6 344 aa21.75■■□□□ 1.07
SNX1-206ENST00000559389 SYCP2LQ5T4T6 812 aa21.75■■□□□ 1.07
SNX1-206ENST00000559389 PEAR1Q5VY43 1037 aaPredicted RBP21.75■■□□□ 1.07
SNX1-206ENST00000559389 CYP2U1Q7Z449 544 aa21.75■■□□□ 1.07
SNX1-206ENST00000559389 SPATA4Q8NEY3 305 aa21.75■■□□□ 1.07
SNX1-206ENST00000559389 RUNDC3BQ96NL0 473 aa21.75■■□□□ 1.07
SNX1-206ENST00000559389 C1QTNF2Q9BXJ5 285 aa21.75■■□□□ 1.07
SNX1-206ENST00000559389 LRRC40Q9H9A6 602 aa21.75■■□□□ 1.07
SNX1-206ENST00000559389 EBF2Q9HAK2 575 aa21.75■■□□□ 1.07
SNX1-206ENST00000559389 FEZ2Q9UHY8 353 aaPredicted RBP21.75■■□□□ 1.07
SNX1-206ENST00000559389 DMTF1Q9Y222 760 aa21.75■■□□□ 1.07
SNX1-206ENST00000559389 ATXN2Q99700 1313 aaKnown RBP21.75■■□□□ 1.07
SNX1-206ENST00000559389 LRRK1Q38SD2 2015 aa21.74■■□□□ 1.07
SNX1-206ENST00000559389 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.74■■□□□ 1.07
SNX1-206ENST00000559389 A0A1W2PPC4 97 aa21.74■■□□□ 1.07
SNX1-206ENST00000559389 IGLON5A6NGN9 336 aa21.74■■□□□ 1.07
SNX1-206ENST00000559389 ERI2A8K979 691 aaKnown RBP21.74■■□□□ 1.07
SNX1-206ENST00000559389 MMP20O60882 483 aa21.74■■□□□ 1.07
SNX1-206ENST00000559389 AGTP01019 485 aa21.74■■□□□ 1.07
SNX1-206ENST00000559389 KRT14P02533 472 aa21.74■■□□□ 1.07
SNX1-206ENST00000559389 ELFN1P0C7U0 828 aa21.74■■□□□ 1.07
SNX1-206ENST00000559389 DEKP35659 375 aaKnown RBP21.74■■□□□ 1.07
SNX1-206ENST00000559389 LIG3P49916 1009 aa21.74■■□□□ 1.07
SNX1-206ENST00000559389 OLIG2Q13516 323 aa21.74■■□□□ 1.07
SNX1-206ENST00000559389 TRIP13Q15645 432 aaPredicted RBP21.74■■□□□ 1.07
SNX1-206ENST00000559389 WHAMMP3Q1A5X7 153 aa21.74■■□□□ 1.07
SNX1-206ENST00000559389 CCDC70Q6NSX1 233 aa21.74■■□□□ 1.07
SNX1-206ENST00000559389 RANBP10Q6VN20 620 aa21.74■■□□□ 1.07
SNX1-206ENST00000559389 LIPIQ6XZB0 460 aa21.74■■□□□ 1.07
SNX1-206ENST00000559389 TSPAN33Q86UF1 283 aa21.74■■□□□ 1.07
SNX1-206ENST00000559389 KLHL7Q8IXQ5 586 aa21.74■■□□□ 1.07
SNX1-206ENST00000559389 PDCD7Q8N8D1 485 aaKnown RBP21.74■■□□□ 1.07
SNX1-206ENST00000559389 ASB12Q8WXK4 309 aa21.74■■□□□ 1.07
SNX1-206ENST00000559389 TBL1YQ9BQ87 522 aa21.74■■□□□ 1.07
SNX1-206ENST00000559389 EIF2B4Q9UI10 523 aaKnown RBP21.74■■□□□ 1.07
SNX1-206ENST00000559389 PCDHGA5Q9Y5G8 931 aa21.74■■□□□ 1.07
SNX1-206ENST00000559389 MRFAP1Q9Y605 127 aa21.74■■□□□ 1.07
SNX1-206ENST00000559389 A8MX80 341 aa21.73■■□□□ 1.07
SNX1-206ENST00000559389 PSMD11O00231 422 aa21.73■■□□□ 1.07
SNX1-206ENST00000559389 PSMD3O43242 534 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms