RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 PCDH12Q9NPG4 1184 aa14.88□□□□□ -0.03
SNRPA1-207ENST00000559309 GOLGA6AQ9NYA3 693 aa14.88□□□□□ -0.03
SNRPA1-207ENST00000559309 SHOC2Q9UQ13 582 aa14.88□□□□□ -0.03
SNRPA1-207ENST00000559309 NUMA1Q14980 2115 aa14.87□□□□□ -0.03
SNRPA1-207ENST00000559309 TNRC6BQ9UPQ9 1833 aaKnown RBP14.87□□□□□ -0.03
SNRPA1-207ENST00000559309 PLXNA2O75051 1894 aa14.87□□□□□ -0.03
SNRPA1-207ENST00000559309 EFCAB8A8MWE9 144 aa14.87□□□□□ -0.03
SNRPA1-207ENST00000559309 H0Y858 1186 aa14.87□□□□□ -0.03
SNRPA1-207ENST00000559309 AXIN1O15169 862 aa14.87□□□□□ -0.03
SNRPA1-207ENST00000559309 GFRA3O60609 400 aa14.87□□□□□ -0.03
SNRPA1-207ENST00000559309 LILRB5O75023 590 aa14.87□□□□□ -0.03
SNRPA1-207ENST00000559309 APRTP07741 180 aa14.87□□□□□ -0.03
SNRPA1-207ENST00000559309 ITIH2P19823 946 aa14.87□□□□□ -0.03
SNRPA1-207ENST00000559309 LHCGRP22888 699 aa14.87□□□□□ -0.03
SNRPA1-207ENST00000559309 OXTRP30559 389 aa14.87□□□□□ -0.03
SNRPA1-207ENST00000559309 ACSL1P33121 698 aa14.87□□□□□ -0.03
SNRPA1-207ENST00000559309 HNF1BP35680 557 aa14.87□□□□□ -0.03
SNRPA1-207ENST00000559309 SPARCL1Q14515 664 aa14.87□□□□□ -0.03
SNRPA1-207ENST00000559309 MORF4L2Q15014 288 aa14.87□□□□□ -0.03
SNRPA1-207ENST00000559309 TMEM259Q4ZIN3 620 aa14.87□□□□□ -0.03
SNRPA1-207ENST00000559309 ARMC3Q5W041 872 aa14.87□□□□□ -0.03
SNRPA1-207ENST00000559309 NEK5Q6P3R8 708 aa14.87□□□□□ -0.03
SNRPA1-207ENST00000559309 LRRC8BQ6P9F7 803 aa14.87□□□□□ -0.03
SNRPA1-207ENST00000559309 ZDHHC24Q6UX98 284 aa14.87□□□□□ -0.03
SNRPA1-207ENST00000559309 PCGF5Q86SE9 256 aa14.87□□□□□ -0.03
SNRPA1-207ENST00000559309 ART4Q93070 314 aa14.87□□□□□ -0.03
SNRPA1-207ENST00000559309 EID2BQ96D98 161 aa14.87□□□□□ -0.03
SNRPA1-207ENST00000559309 SNF8Q96H20 258 aa14.87□□□□□ -0.03
SNRPA1-207ENST00000559309 PCED1AQ9H1Q7 454 aa14.87□□□□□ -0.03
SNRPA1-207ENST00000559309 ASIC3Q9UHC3 531 aa14.87□□□□□ -0.03
SNRPA1-207ENST00000559309 MBD1Q9UIS9 605 aaPredicted RBP14.87□□□□□ -0.03
SNRPA1-207ENST00000559309 SPO11Q9Y5K1 396 aa14.87□□□□□ -0.03
SNRPA1-207ENST00000559309 GVINP1Q7Z2Y8 2422 aa14.86□□□□□ -0.03
SNRPA1-207ENST00000559309 NPIPB15A6NHN6 443 aaPredicted RBP14.86□□□□□ -0.03
SNRPA1-207ENST00000559309 LATO43561 262 aa14.86□□□□□ -0.03
SNRPA1-207ENST00000559309 TSPAN6O43657 245 aa14.86□□□□□ -0.03
SNRPA1-207ENST00000559309 USP12O75317 370 aa14.86□□□□□ -0.03
SNRPA1-207ENST00000559309 RNASEH2AO75792 299 aaKnown RBP14.86□□□□□ -0.03
SNRPA1-207ENST00000559309 ECHS1P30084 290 aa14.86□□□□□ -0.03
SNRPA1-207ENST00000559309 ADCY8P40145 1251 aa14.86□□□□□ -0.03
SNRPA1-207ENST00000559309 PXNP49023 591 aaPredicted RBP14.86□□□□□ -0.03
SNRPA1-207ENST00000559309 VPS41P49754 854 aa14.86□□□□□ -0.03
SNRPA1-207ENST00000559309 BASP1P80723 227 aaKnown RBP14.86□□□□□ -0.03
SNRPA1-207ENST00000559309 CCDC15Q0P6D6 951 aa14.86□□□□□ -0.03
SNRPA1-207ENST00000559309 ELP6Q0PNE2 266 aa14.86□□□□□ -0.03
SNRPA1-207ENST00000559309 CDH17Q12864 832 aa14.86□□□□□ -0.03
SNRPA1-207ENST00000559309 GALNT3Q14435 633 aa14.86□□□□□ -0.03
SNRPA1-207ENST00000559309 PTPRRQ15256 657 aa14.86□□□□□ -0.03
SNRPA1-207ENST00000559309 ANGPT1Q15389 498 aa14.86□□□□□ -0.03
SNRPA1-207ENST00000559309 TRADDQ15628 312 aa14.86□□□□□ -0.03
SNRPA1-207ENST00000559309 PCSK7Q16549 785 aa14.86□□□□□ -0.03
SNRPA1-207ENST00000559309 POM121L1PQ3SYA9 428 aa14.86□□□□□ -0.03
SNRPA1-207ENST00000559309 IZUMO3Q5VZ72 239 aa14.86□□□□□ -0.03
SNRPA1-207ENST00000559309 FBXL19Q6PCT2 694 aa14.86□□□□□ -0.03
SNRPA1-207ENST00000559309 CRTC1Q6UUV9 634 aa14.86□□□□□ -0.03
SNRPA1-207ENST00000559309 KIAA1324Q6UXG2 1013 aaKnown RBP14.86□□□□□ -0.03
SNRPA1-207ENST00000559309 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.86□□□□□ -0.03
SNRPA1-207ENST00000559309 TTC7BQ86TV6 843 aa14.86□□□□□ -0.03
SNRPA1-207ENST00000559309 CACUL1Q86Y37 369 aa14.86□□□□□ -0.03
SNRPA1-207ENST00000559309 AGGF1Q8N302 714 aaeCLIP14.86□□□□□ -0.03
SNRPA1-207ENST00000559309 TTC30BQ8N4P2 665 aa14.86□□□□□ -0.03
SNRPA1-207ENST00000559309 TAB3Q8N5C8 712 aaPredicted RBP14.86□□□□□ -0.03
SNRPA1-207ENST00000559309 FRMD1Q8N878 549 aa14.86□□□□□ -0.03
SNRPA1-207ENST00000559309 LPCAT1Q8NF37 534 aa14.86□□□□□ -0.03
SNRPA1-207ENST00000559309 ASB12Q8WXK4 309 aa14.86□□□□□ -0.03
SNRPA1-207ENST00000559309 ATOH1Q92858 354 aaPredicted RBP14.86□□□□□ -0.03
SNRPA1-207ENST00000559309 IFT43Q96FT9 208 aa14.86□□□□□ -0.03
SNRPA1-207ENST00000559309 RANBP9Q96S59 729 aa14.86□□□□□ -0.03
SNRPA1-207ENST00000559309 SRPK1Q96SB4 655 aaKnown RBP14.86□□□□□ -0.03
SNRPA1-207ENST00000559309 OMDQ99983 421 aa14.86□□□□□ -0.03
SNRPA1-207ENST00000559309 ORAI3Q9BRQ5 295 aa14.86□□□□□ -0.03
SNRPA1-207ENST00000559309 TPSD1Q9BZJ3 242 aa14.86□□□□□ -0.03
SNRPA1-207ENST00000559309 RAB17Q9H0T7 212 aa14.86□□□□□ -0.03
SNRPA1-207ENST00000559309 PREBQ9HCU5 417 aa14.86□□□□□ -0.03
SNRPA1-207ENST00000559309 GDF3Q9NR23 364 aa14.86□□□□□ -0.03
SNRPA1-207ENST00000559309 ZDHHC18Q9NUE0 388 aa14.86□□□□□ -0.03
SNRPA1-207ENST00000559309 FAM86C1Q9NVL1 165 aa14.86□□□□□ -0.03
SNRPA1-207ENST00000559309 B4GALT6Q9UBX8 382 aa14.86□□□□□ -0.03
SNRPA1-207ENST00000559309 GGT7Q9UJ14 662 aa14.86□□□□□ -0.03
SNRPA1-207ENST00000559309 WDR87Q6ZQQ6 2873 aa14.86□□□□□ -0.03
SNRPA1-207ENST00000559309 E7ESA3 106 aa14.85□□□□□ -0.03
SNRPA1-207ENST00000559309 PSMD11O00231 422 aa14.85□□□□□ -0.03
SNRPA1-207ENST00000559309 HEXIM1O94992 359 aaKnown RBP14.85□□□□□ -0.03
SNRPA1-207ENST00000559309 SLU7O95391 586 aaKnown RBP14.85□□□□□ -0.03
SNRPA1-207ENST00000559309 ALPIP09923 528 aa14.85□□□□□ -0.03
SNRPA1-207ENST00000559309 SP9P0CG40 484 aa14.85□□□□□ -0.03
SNRPA1-207ENST00000559309 ACADMP11310 421 aa14.85□□□□□ -0.03
SNRPA1-207ENST00000559309 ZNF30P17039 623 aa14.85□□□□□ -0.03
SNRPA1-207ENST00000559309 CD6P30203 668 aa14.85□□□□□ -0.03
SNRPA1-207ENST00000559309 VIPR1P32241 457 aa14.85□□□□□ -0.03
SNRPA1-207ENST00000559309 FNTBP49356 437 aa14.85□□□□□ -0.03
SNRPA1-207ENST00000559309 TUBB4BP68371 445 aa14.85□□□□□ -0.03
SNRPA1-207ENST00000559309 PTSQ03393 145 aa14.85□□□□□ -0.03
SNRPA1-207ENST00000559309 CSTF1Q05048 431 aaKnown RBP14.85□□□□□ -0.03
SNRPA1-207ENST00000559309 CNGA3Q16281 694 aa14.85□□□□□ -0.03
SNRPA1-207ENST00000559309 LIPIQ6XZB0 460 aa14.85□□□□□ -0.03
SNRPA1-207ENST00000559309 USP45Q70EL2 814 aa14.85□□□□□ -0.03
SNRPA1-207ENST00000559309 TMC3Q7Z5M5 1100 aa14.85□□□□□ -0.03
SNRPA1-207ENST00000559309 TRIM69Q86WT6 500 aa14.85□□□□□ -0.03
SNRPA1-207ENST00000559309 OR52K1Q8NGK4 314 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms