RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 KIF5CO60282 957 aa11.49□□□□□ -0.57
SNX1-204ENST00000559061 CEP104O60308 925 aa11.49□□□□□ -0.57
SNX1-204ENST00000559061 LRP3O75074 770 aa11.49□□□□□ -0.57
SNX1-204ENST00000559061 PCDH8O95206 1070 aa11.49□□□□□ -0.57
SNX1-204ENST00000559061 METTL18O95568 372 aa11.49□□□□□ -0.57
SNX1-204ENST00000559061 TRBC1P01850 177 aa11.49□□□□□ -0.57
SNX1-204ENST00000559061 C1SP09871 688 aa11.49□□□□□ -0.57
SNX1-204ENST00000559061 C6P13671 934 aa11.49□□□□□ -0.57
SNX1-204ENST00000559061 ETS1P14921 441 aa11.49□□□□□ -0.57
SNX1-204ENST00000559061 PSMB4P28070 264 aa11.49□□□□□ -0.57
SNX1-204ENST00000559061 HOXD12P35452 270 aa11.49□□□□□ -0.57
SNX1-204ENST00000559061 IGFALSP35858 605 aa11.49□□□□□ -0.57
SNX1-204ENST00000559061 CHRNA4P43681 627 aa11.49□□□□□ -0.57
SNX1-204ENST00000559061 CLDN2P57739 230 aa11.49□□□□□ -0.57
SNX1-204ENST00000559061 SFSWAPQ12872 951 aaKnown RBP11.49□□□□□ -0.57
SNX1-204ENST00000559061 MSLNQ13421 630 aaPredicted RBP11.49□□□□□ -0.57
SNX1-204ENST00000559061 GALNT3Q14435 633 aa11.49□□□□□ -0.57
SNX1-204ENST00000559061 TRIM61Q5EBN2 209 aa11.49□□□□□ -0.57
SNX1-204ENST00000559061 ANKRD20A2Q5SQ80 823 aa11.49□□□□□ -0.57
SNX1-204ENST00000559061 ARMC12Q5T9G4 340 aa11.49□□□□□ -0.57
SNX1-204ENST00000559061 CCDC181Q5TID7 509 aa11.49□□□□□ -0.57
SNX1-204ENST00000559061 ANKRD20A1Q5TYW2 823 aa11.49□□□□□ -0.57
SNX1-204ENST00000559061 ANKRD20A3Q5VUR7 823 aa11.49□□□□□ -0.57
SNX1-204ENST00000559061 KIAA1161Q6NSJ0 714 aa11.49□□□□□ -0.57
SNX1-204ENST00000559061 DARS2Q6PI48 645 aaKnown RBP11.49□□□□□ -0.57
SNX1-204ENST00000559061 LIPIQ6XZB0 460 aa11.49□□□□□ -0.57
SNX1-204ENST00000559061 HSD11B1LQ7Z5J1 315 aa11.49□□□□□ -0.57
SNX1-204ENST00000559061 SPATS2Q86XZ4 545 aaKnown RBP11.49□□□□□ -0.57
SNX1-204ENST00000559061 SLC22A18ASQ8N1D0 253 aa11.49□□□□□ -0.57
SNX1-204ENST00000559061 PDCD6IPQ8WUM4 868 aaKnown RBP11.49□□□□□ -0.57
SNX1-204ENST00000559061 CENPTQ96BT3 561 aa11.49□□□□□ -0.57
SNX1-204ENST00000559061 BMFQ96LC9 184 aa11.49□□□□□ -0.57
SNX1-204ENST00000559061 COQ10AQ96MF6 247 aa11.49□□□□□ -0.57
SNX1-204ENST00000559061 SPATA13Q96N96 652 aa11.49□□□□□ -0.57
SNX1-204ENST00000559061 MIR1-1HGQ9H1L0 117 aa11.49□□□□□ -0.57
SNX1-204ENST00000559061 PCDH9Q9HC56 1237 aa11.49□□□□□ -0.57
SNX1-204ENST00000559061 MBNL1Q9NR56 388 aaKnown RBP11.49□□□□□ -0.57
SNX1-204ENST00000559061 VPS45Q9NRW7 570 aa11.49□□□□□ -0.57
SNX1-204ENST00000559061 KLHL8Q9P2G9 620 aaPredicted RBP11.49□□□□□ -0.57
SNX1-204ENST00000559061 PNMA8BQ9ULN7 279 aaPredicted RBP11.49□□□□□ -0.57
SNX1-204ENST00000559061 TTC7AQ9ULT0 858 aaPredicted RBP11.49□□□□□ -0.57
SNX1-204ENST00000559061 SPO11Q9Y5K1 396 aa11.49□□□□□ -0.57
SNX1-204ENST00000559061 BPTFQ12830 3046 aa11.49□□□□□ -0.57
SNX1-204ENST00000559061 A0A1B0GTW7 788 aa11.48□□□□□ -0.57
SNX1-204ENST00000559061 A0A1B0GVT2 93 aa11.48□□□□□ -0.57
SNX1-204ENST00000559061 LOC285095A0A1B0GVY8 99 aa11.48□□□□□ -0.57
SNX1-204ENST00000559061 POM121BA6NF01 834 aa11.48□□□□□ -0.57
SNX1-204ENST00000559061 C5orf60A6NFR6 353 aa11.48□□□□□ -0.57
SNX1-204ENST00000559061 CAPN8A6NHC0 703 aa11.48□□□□□ -0.57
SNX1-204ENST00000559061 PDE2AO00408 941 aaPredicted RBP11.48□□□□□ -0.57
SNX1-204ENST00000559061 MTSS1O43312 755 aa11.48□□□□□ -0.57
SNX1-204ENST00000559061 HEXIM1O94992 359 aaKnown RBP11.48□□□□□ -0.57
SNX1-204ENST00000559061 PAK4O96013 591 aaPredicted RBP11.48□□□□□ -0.57
SNX1-204ENST00000559061 SERPINF2P08697 491 aa11.48□□□□□ -0.57
SNX1-204ENST00000559061 ZSCAN5DPP0CG00 497 aa11.48□□□□□ -0.57
SNX1-204ENST00000559061 CES1P23141 567 aa11.48□□□□□ -0.57
SNX1-204ENST00000559061 ADRA1AP35348 466 aa11.48□□□□□ -0.57
SNX1-204ENST00000559061 HNF1BP35680 557 aa11.48□□□□□ -0.57
SNX1-204ENST00000559061 CSNK1EP49674 416 aaKnown RBP11.48□□□□□ -0.57
SNX1-204ENST00000559061 LIG3P49916 1009 aa11.48□□□□□ -0.57
SNX1-204ENST00000559061 SUOXP51687 545 aa11.48□□□□□ -0.57
SNX1-204ENST00000559061 WNT3AP56704 352 aa11.48□□□□□ -0.57
SNX1-204ENST00000559061 GNG11P61952 73 aa11.48□□□□□ -0.57
SNX1-204ENST00000559061 RPS21P63220 83 aaKnown RBP11.48□□□□□ -0.57
SNX1-204ENST00000559061 GRIK2Q13002 908 aa11.48□□□□□ -0.57
SNX1-204ENST00000559061 SNX1Q13596 522 aa11.48□□□□□ -0.57
SNX1-204ENST00000559061 SHBQ15464 509 aa11.48□□□□□ -0.57
SNX1-204ENST00000559061 PCSK7Q16549 785 aa11.48□□□□□ -0.57
SNX1-204ENST00000559061 WSCD2Q2TBF2 565 aa11.48□□□□□ -0.57
SNX1-204ENST00000559061 WDR45BQ5MNZ6 344 aa11.48□□□□□ -0.57
SNX1-204ENST00000559061 FAXCQ5TGI0 409 aa11.48□□□□□ -0.57
SNX1-204ENST00000559061 PAPD7Q5XG87 772 aaKnown RBP11.48□□□□□ -0.57
SNX1-204ENST00000559061 KCTD16Q68DU8 428 aa11.48□□□□□ -0.57
SNX1-204ENST00000559061 KCTD11Q693B1 232 aa11.48□□□□□ -0.57
SNX1-204ENST00000559061 NAPEPLDQ6IQ20 393 aa11.48□□□□□ -0.57
SNX1-204ENST00000559061 DRICH1Q6PGQ1 229 aaPredicted RBP11.48□□□□□ -0.57
SNX1-204ENST00000559061 CRTC1Q6UUV9 634 aa11.48□□□□□ -0.57
SNX1-204ENST00000559061 MICALCLQ6ZW33 695 aa11.48□□□□□ -0.57
SNX1-204ENST00000559061 PID1Q7Z2X4 250 aa11.48□□□□□ -0.57
SNX1-204ENST00000559061 ABI3BPQ7Z7G0 1075 aa11.48□□□□□ -0.57
SNX1-204ENST00000559061 RGL4Q8IZJ4 473 aa11.48□□□□□ -0.57
SNX1-204ENST00000559061 TTC13Q8NBP0 860 aa11.48□□□□□ -0.57
SNX1-204ENST00000559061 LPCAT1Q8NF37 534 aa11.48□□□□□ -0.57
SNX1-204ENST00000559061 SCRN2Q96FV2 425 aa11.48□□□□□ -0.57
SNX1-204ENST00000559061 SERAC1Q96JX3 654 aa11.48□□□□□ -0.57
SNX1-204ENST00000559061 LYSMD1Q96S90 227 aa11.48□□□□□ -0.57
SNX1-204ENST00000559061 VAT1Q99536 393 aa11.48□□□□□ -0.57
SNX1-204ENST00000559061 SLC17A9Q9BYT1 436 aa11.48□□□□□ -0.57
SNX1-204ENST00000559061 IL21RQ9HBE5 538 aa11.48□□□□□ -0.57
SNX1-204ENST00000559061 PHTF1Q9UMS5 762 aa11.48□□□□□ -0.57
SNX1-204ENST00000559061 PLXNB3Q9ULL4 1909 aa11.47□□□□□ -0.57
SNX1-204ENST00000559061 GOLGA6L9A6NEM1 432 aa11.47□□□□□ -0.57
SNX1-204ENST00000559061 K7ESM1 405 aa11.47□□□□□ -0.57
SNX1-204ENST00000559061 AURKAO14965 403 aa11.47□□□□□ -0.57
SNX1-204ENST00000559061 PMPCBO75439 489 aa11.47□□□□□ -0.57
SNX1-204ENST00000559061 GCATO75600 419 aa11.47□□□□□ -0.57
SNX1-204ENST00000559061 SOD1P00441 154 aa11.47□□□□□ -0.57
SNX1-204ENST00000559061 ITGAVP06756 1048 aa11.47□□□□□ -0.57
SNX1-204ENST00000559061 PIRTP0C851 137 aa11.47□□□□□ -0.57
SNX1-204ENST00000559061 ENGP17813 658 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms