RNA–Protein interactions for RNA: ENST00000558655.5

ZEB1-212, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 2,773 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-212ENST00000558655 CAPNS1P04632 268 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 C8BP07358 591 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 MYL4P12829 197 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 TFEBP19484 476 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 IDUAP35475 653 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 ASMTP46597 345 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 KCNJ1P48048 391 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 DRG2P55039 364 aaKnown RBP4.13□□□□□ -1.75
ZEB1-212ENST00000558655 NR1H2P55055 460 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 FCHO2Q0JRZ9 810 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 TRIP13Q15645 432 aaPredicted RBP4.13□□□□□ -1.75
ZEB1-212ENST00000558655 CNGA3Q16281 694 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 INAQ16352 499 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 TAF12Q16514 161 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 C10orf120Q5SQS8 335 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 SLC9A4Q6AI14 798 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 BLOC1S3Q6QNY0 202 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 C6orf15Q6UXA7 325 aaPredicted RBP4.13□□□□□ -1.75
ZEB1-212ENST00000558655 ZNF783Q6ZMS7 281 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 MTSS1LQ765P7 747 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 CHST15Q7LFX5 561 aaPredicted RBP4.13□□□□□ -1.75
ZEB1-212ENST00000558655 RBM23Q86U06 439 aaKnown RBP4.13□□□□□ -1.75
ZEB1-212ENST00000558655 TICAM1Q8IUC6 712 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 UBL4BQ8N7F7 174 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 ITFG1Q8TB96 612 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 ACTRT1Q8TDG2 376 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 DEPDC1BQ8WUY9 529 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 EDEM1Q92611 657 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 SMARCD2Q92925 531 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 USP13Q92995 863 aaPredicted RBP4.13□□□□□ -1.75
ZEB1-212ENST00000558655 FAM149B1Q96BN6 582 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 SNRNP25Q9BV90 132 aaKnown RBP4.13□□□□□ -1.75
ZEB1-212ENST00000558655 TXLNGYQ9BZA5 131 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 B3GNT4Q9C0J1 378 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 PCDH18Q9HCL0 1135 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 DDIT4Q9NX09 232 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 TBC1D14Q9P2M4 693 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 GMEB2Q9UKD1 530 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 ITGB1BP2Q9UKP3 347 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 SRPK3Q9UPE1 567 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 POLHQ9Y253 713 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.13□□□□□ -1.75
ZEB1-212ENST00000558655 USP15Q9Y4E8 981 aaPredicted RBP4.13□□□□□ -1.75
ZEB1-212ENST00000558655 PCDHGA11Q9Y5H2 935 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 MKI67P46013 3256 aaKnown RBP4.13□□□□□ -1.75
ZEB1-212ENST00000558655 CKAP5Q14008 2032 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 LAMA3Q16787 3333 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 MYOFQ9NZM1 2061 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 SPTBN5Q9NRC6 3674 aaKnown RBP4.13□□□□□ -1.75
ZEB1-212ENST00000558655 ANKRD36A6QL64 1941 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 PLXND1Q9Y4D7 1925 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 A0A1W2PRU2 124 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 A6NHS1 94 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 A6NLC8 198 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 UBXN8O00124 270 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 LEFTY2O00292 366 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 PRPSAP2O60256 369 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 PAGE1O75459 146 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 GRAP2O75791 330 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 PENKP01210 267 aaPredicted RBP4.13□□□□□ -1.75
ZEB1-212ENST00000558655 APOEP02649 317 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 SHBGP04278 402 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 PDHA1P08559 390 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 RARAP10276 462 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 CYP2A6P11509 494 aaPredicted RBP4.13□□□□□ -1.75
ZEB1-212ENST00000558655 HDCP19113 662 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 KDELR1P24390 212 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 ECHS1P30084 290 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 CDKN2BP42772 138 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 SLCO1A2P46721 670 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 VPS41P49754 854 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 LIG3P49916 1009 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 IRAK1P51617 712 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 RWDD2BP57060 319 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 GPR85P60893 370 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 NTHL1P78549 312 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 CYP4F8P98187 520 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 ZNF33AQ06730 810 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 DLX2Q07687 328 aaPredicted RBP4.13□□□□□ -1.75
ZEB1-212ENST00000558655 TNK2Q07912 1038 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 EFEMP1Q12805 493 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 KLF1Q13351 362 aaPredicted RBP4.13□□□□□ -1.75
ZEB1-212ENST00000558655 MTM1Q13496 603 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 SNX1Q13596 522 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 HTR4Q13639 388 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 DPYSL3Q14195 570 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 PAFAH1B3Q15102 231 aaKnown RBP4.13□□□□□ -1.75
ZEB1-212ENST00000558655 PDGFRLQ15198 375 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 UAP1Q16222 522 aaPredicted RBP4.13□□□□□ -1.75
ZEB1-212ENST00000558655 CYP1B1Q16678 543 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 CLPPQ16740 277 aaPredicted RBP4.13□□□□□ -1.75
ZEB1-212ENST00000558655 SMUG1Q53HV7 270 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 RAB6CQ53S08 254 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 EFHC2Q5JST6 749 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 SH3PXD2AQ5TCZ1 1133 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 PIK3R6Q5UE93 754 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 METTL11BQ5VVY1 283 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 TXNDC8Q6A555 127 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 NADSYN1Q6IA69 706 aa4.13□□□□□ -1.75
ZEB1-212ENST00000558655 DESI1Q6ICB0 168 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms