RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 SLC25A13Q9UJS0 675 aa11.34□□□□□ -0.59
RABGGTA-204ENST00000558376 hCG_1818297A0A087WSY0 165 aa11.33□□□□□ -0.6
RABGGTA-204ENST00000558376 CCDC188H7C350 402 aa11.33□□□□□ -0.6
RABGGTA-204ENST00000558376 I6L893 689 aaPredicted RBP11.33□□□□□ -0.6
RABGGTA-204ENST00000558376 K7ERQ8 282 aa11.33□□□□□ -0.6
RABGGTA-204ENST00000558376 KLK10O43240 276 aa11.33□□□□□ -0.6
RABGGTA-204ENST00000558376 HEXIM1O94992 359 aaKnown RBP11.33□□□□□ -0.6
RABGGTA-204ENST00000558376 SRCP12931 536 aa11.33□□□□□ -0.6
RABGGTA-204ENST00000558376 H2AFXP16104 143 aaPredicted RBP11.33□□□□□ -0.6
RABGGTA-204ENST00000558376 CLCN6P51797 869 aa11.33□□□□□ -0.6
RABGGTA-204ENST00000558376 OXCT1P55809 520 aa11.33□□□□□ -0.6
RABGGTA-204ENST00000558376 TUBB4BP68371 445 aa11.33□□□□□ -0.6
RABGGTA-204ENST00000558376 LY6DQ14210 128 aa11.33□□□□□ -0.6
RABGGTA-204ENST00000558376 PPP6R3Q5H9R7 873 aaPredicted RBP11.33□□□□□ -0.6
RABGGTA-204ENST00000558376 RABGAP1LQ5R372 815 aa11.33□□□□□ -0.6
RABGGTA-204ENST00000558376 ERMARDQ5T6L9 678 aa11.33□□□□□ -0.6
RABGGTA-204ENST00000558376 TTC39BQ5VTQ0 682 aaPredicted RBP11.33□□□□□ -0.6
RABGGTA-204ENST00000558376 BROXQ5VW32 411 aa11.33□□□□□ -0.6
RABGGTA-204ENST00000558376 CCDC137Q6PK04 289 aaKnown RBP11.33□□□□□ -0.6
RABGGTA-204ENST00000558376 GCNT7Q6ZNI0 430 aa11.33□□□□□ -0.6
RABGGTA-204ENST00000558376 ABI3BPQ7Z7G0 1075 aa11.33□□□□□ -0.6
RABGGTA-204ENST00000558376 CHST14Q8NCH0 376 aa11.33□□□□□ -0.6
RABGGTA-204ENST00000558376 LRRN4Q8WUT4 740 aa11.33□□□□□ -0.6
RABGGTA-204ENST00000558376 IFT81Q8WYA0 676 aa11.33□□□□□ -0.6
RABGGTA-204ENST00000558376 RBM41Q96IZ5 413 aaKnown RBP11.33□□□□□ -0.6
RABGGTA-204ENST00000558376 BMFQ96LC9 184 aa11.33□□□□□ -0.6
RABGGTA-204ENST00000558376 RPRD1AQ96P16 312 aaPredicted RBP11.33□□□□□ -0.6
RABGGTA-204ENST00000558376 DEPDC7Q96QD5 511 aa11.33□□□□□ -0.6
RABGGTA-204ENST00000558376 TRIM51Q9BSJ1 452 aa11.33□□□□□ -0.6
RABGGTA-204ENST00000558376 TRIM62Q9BVG3 475 aa11.33□□□□□ -0.6
RABGGTA-204ENST00000558376 TRIM31Q9BZY9 425 aa11.33□□□□□ -0.6
RABGGTA-204ENST00000558376 FAM204AQ9H8W3 233 aa11.33□□□□□ -0.6
RABGGTA-204ENST00000558376 VANGL2Q9ULK5 521 aa11.33□□□□□ -0.6
RABGGTA-204ENST00000558376 AHCTF1Q8WYP5 2266 aa11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 GOLGA6L10A0A0M3HER8 536 aa11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 K7ESM1 405 aa11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 SMAD6O43541 496 aaKnown RBP11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 SNAP91O60641 907 aa11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 CST8O60676 142 aa11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 PHF2O75151 1096 aa11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 NEBLO76041 1014 aa11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 AKT2P31751 481 aa11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 L1CAMP32004 1257 aa11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 CHRNA3P32297 505 aa11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 COILP38432 576 aaPredicted RBP11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 PTGIRP43119 386 aa11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 ARSEP51690 589 aa11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 ERVPABLB-1P60509 514 aa11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 DEUP1Q05D60 604 aa11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 ZNF177Q13360 481 aaPredicted RBP11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 DPYSL3Q14195 570 aa11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 FGL2Q14314 439 aa11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 BOLA3Q53S33 107 aa11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 SEL1L3Q68CR1 1132 aa11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 NEK5Q6P3R8 708 aa11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 Q6ZSR6 202 aa11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 LSMEM2Q8N112 164 aa11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 FAM181AQ8N9Y4 354 aa11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 OR2A12Q8NGT7 310 aa11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 KCNE4Q8WWG9 221 aa11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 RNF34Q969K3 372 aa11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 DHX35Q9H5Z1 703 aaKnown RBP11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 DDIT4Q9NX09 232 aa11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 NLGN3Q9NZ94 848 aa11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 VPS28Q9UK41 221 aa11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 RAB21Q9UL25 225 aa11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 SSUH2Q9Y2M2 353 aa11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 HS3ST4Q9Y661 456 aa11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 DOCK4Q8N1I0 1966 aa11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 CAPN8A6NHC0 703 aa11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 KPNA3O00505 521 aaPredicted RBP11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 SCAMP1O15126 338 aa11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 CNTN5O94779 1100 aa11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 ENDOD1O94919 500 aa11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 HNRNPA2B1P22626 353 aaKnown RBP11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 CCR1P32246 355 aa11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 CARSP49589 748 aaKnown RBP11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 UCNP55089 124 aa11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 DR1Q01658 176 aa11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 KRT81Q14533 505 aa11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 TRIP13Q15645 432 aaPredicted RBP11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 ISXQ2M1V0 245 aa11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 NPNTQ6UXI9 565 aa11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 BNIPLQ7Z465 357 aa11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 RFX6Q8HWS3 928 aa11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 NETO2Q8NC67 525 aa11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 IFI44Q8TCB0 444 aa11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 CASKIN2Q8WXE0 1202 aa11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 PRR11Q96HE9 360 aaPredicted RBP11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 HS3ST2Q9Y278 367 aa11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 TBC1D30Q9Y2I9 924 aa11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 SNX10Q9Y5X0 201 aa11.32□□□□□ -0.6
RABGGTA-204ENST00000558376 PMS2P1A4D2B8 440 aa11.31□□□□□ -0.6
RABGGTA-204ENST00000558376 FAM72CH0Y354 149 aa11.31□□□□□ -0.6
RABGGTA-204ENST00000558376 RAD51BO15315 384 aa11.31□□□□□ -0.6
RABGGTA-204ENST00000558376 LZTS3O60299 673 aaPredicted RBP11.31□□□□□ -0.6
RABGGTA-204ENST00000558376 TJP3O95049 919 aa11.31□□□□□ -0.6
RABGGTA-204ENST00000558376 PCDH8O95206 1070 aa11.31□□□□□ -0.6
RABGGTA-204ENST00000558376 MAP3K6O95382 1288 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms