RNA–Protein interactions for RNA: ENST00000558373.5

CTDSPL2-202, Transcript of CTD small phosphatase like 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSPL2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-202ENST00000558373 PMPCAQ10713 525 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 FOXF2Q12947 444 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 STIM1Q13586 685 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 KCNC3Q14003 757 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 IL13RA2Q14627 380 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 DRAP1Q14919 205 aaPredicted RBP1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 VMACQ2NL98 169 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 ZNF789Q5FWF6 425 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 DNTTIP2Q5QJE6 756 aaKnown RBP1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 GARNL3Q5VVW2 1013 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 NUGGCQ68CJ6 796 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 TXNDC8Q6A555 127 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 MIS18BP1Q6P0N0 1132 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 DBX2Q6ZNG2 339 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 H1FNTQ75WM6 255 aaPredicted RBP1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 SZRD1Q7Z422 152 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 CCDC91Q7Z6B0 441 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 SLFN11Q7Z7L1 901 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 PEG10Q86TG7 708 aaKnown RBP1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 SUGP1Q8IWZ8 645 aaKnown RBP1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 SLC35F5Q8WV83 523 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 RMDN1Q96DB5 314 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 RNFT2Q96EX2 444 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 PLEKHG4BQ96PX9 1271 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 NEK1Q96PY6 1258 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 YME1L1Q96TA2 773 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 ELOVL1Q9BW60 279 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 FZD3Q9NPG1 666 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 ATP8A2Q9NTI2 1148 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 DECR2Q9NUI1 292 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 SEPT11Q9NVA2 429 aaKnown RBP1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 ADD3Q9UEY8 706 aaKnown RBP1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 TBC1D29Q9UFV1 150 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 ANAPC5Q9UJX4 755 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 ITM2BQ9Y287 266 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 TRPM1Q7Z4N2 1603 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 PLCH1Q4KWH8 1693 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 RYR3Q15413 4870 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 KIR2DS5A0A0G2JLQ3 304 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 CENPVL1A0A0U1RR11 272 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 KIR2DS3K7RE56 304 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 AP4M1O00189 453 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 IFIT3O14879 490 aaKnown RBP1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 PRAMEF11O60813 436 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 PRSS23O95084 383 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 LUC7L3O95232 432 aaKnown RBP1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 CBX6O95503 412 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 IFNA2P01563 188 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 FGF2P09038 288 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 IL10P22301 178 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 MCM3P25205 808 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 HMGB2P26583 209 aaKnown RBP1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 NDUFS1P28331 727 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 CTGFP29279 349 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 HARS2P49590 506 aaKnown RBP1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 HSD17B4P51659 736 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 PNLIPRP2P54317 469 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 CSE1LP55060 971 aaKnown RBP1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 INHBCP55103 352 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 FOXL2P58012 376 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 STX1BP61266 288 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 TGFB2P61812 414 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 ARF5P84085 180 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 HSPB3Q12988 150 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 RNPS1Q15287 305 aaKnown RBP1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 PTPN14Q15678 1187 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 TBCEQ15813 527 aaPredicted RBP1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 TMEM266Q2M3C6 531 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 RBM44Q6ZP01 1051 aaKnown RBP1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 Q6ZPA2 131 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 CHST9Q7L1S5 443 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 ENOSF1Q7L5Y1 443 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 COL23A1Q86Y22 540 aaPredicted RBP1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 TIGD4Q8IY51 512 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 BEST2Q8NFU1 509 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 MOSPD2Q8NHP6 518 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 FEZF2Q8TBJ5 459 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 TRPC4APQ8TEL6 797 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 ZNF503Q96F45 646 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 BBS4Q96RK4 519 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 MMS19Q96T76 1030 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 FAM110AQ9BQ89 295 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 LBHD1Q9BQE6 289 aaPredicted RBP1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 MECRQ9BV79 373 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 NUP85Q9BW27 656 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 CCDC106Q9BWC9 280 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 CLPBQ9H078 707 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 FSCN3Q9NQT6 498 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 TMEM248Q9NWD8 314 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 COMMD8Q9NX08 183 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 ZDHHC7Q9NXF8 308 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 TSPYL4Q9UJ04 414 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 CORO1CQ9ULV4 474 aaPredicted RBP1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 MAP3K2Q9Y2U5 619 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 KNSTRNQ9Y448 316 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 CDC42BPGQ6DT37 1551 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 RIMS1Q86UR5 1692 aaKnown RBP1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 OTOL1A6NHN0 477 aaPredicted RBP1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 FAM90A7PA6NKC0 464 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms