RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 UNKQ9C0B0 810 aaKnown RBP4.92□□□□□ -1.62
ATXN3-246ENST00000557030 GANQ9H2C0 597 aa4.92□□□□□ -1.62
ATXN3-246ENST00000557030 CENPHQ9H3R5 247 aa4.92□□□□□ -1.62
ATXN3-246ENST00000557030 RABEP2Q9H5N1 569 aa4.92□□□□□ -1.62
ATXN3-246ENST00000557030 PPANQ9NQ55 473 aaKnown RBP4.92□□□□□ -1.62
ATXN3-246ENST00000557030 BATF3Q9NR55 127 aa4.92□□□□□ -1.62
ATXN3-246ENST00000557030 BLOC1S4Q9NUP1 217 aa4.92□□□□□ -1.62
ATXN3-246ENST00000557030 SMARCAL1Q9NZC9 954 aa4.92□□□□□ -1.62
ATXN3-246ENST00000557030 EHD2Q9NZN4 543 aa4.92□□□□□ -1.62
ATXN3-246ENST00000557030 LPAR3Q9UBY5 353 aa4.92□□□□□ -1.62
ATXN3-246ENST00000557030 USP22Q9UPT9 525 aa4.92□□□□□ -1.62
ATXN3-246ENST00000557030 NFS1Q9Y697 457 aa4.92□□□□□ -1.62
ATXN3-246ENST00000557030 ANKRD31Q8N7Z5 1873 aa4.92□□□□□ -1.62
ATXN3-246ENST00000557030 NRXN2Q9P2S2 1712 aa4.92□□□□□ -1.62
ATXN3-246ENST00000557030 A0A087X0T9 212 aa4.91□□□□□ -1.62
ATXN3-246ENST00000557030 CCDC189A1A4V9 331 aa4.91□□□□□ -1.62
ATXN3-246ENST00000557030 CCT8L1PA6NM43 557 aa4.91□□□□□ -1.62
ATXN3-246ENST00000557030 RASA4BC9J798 803 aa4.91□□□□□ -1.62
ATXN3-246ENST00000557030 F8VZ95 297 aa4.91□□□□□ -1.62
ATXN3-246ENST00000557030 RASA4O43374 803 aa4.91□□□□□ -1.62
ATXN3-246ENST00000557030 CALUO43852 315 aaPredicted RBP4.91□□□□□ -1.62
ATXN3-246ENST00000557030 EDIL3O43854 480 aa4.91□□□□□ -1.62
ATXN3-246ENST00000557030 MGRN1O60291 552 aa4.91□□□□□ -1.62
ATXN3-246ENST00000557030 TLR2O60603 784 aa4.91□□□□□ -1.62
ATXN3-246ENST00000557030 EXOC3O60645 756 aa4.91□□□□□ -1.62
ATXN3-246ENST00000557030 NOL4O94818 638 aa4.91□□□□□ -1.62
ATXN3-246ENST00000557030 IL18RAPO95256 599 aa4.91□□□□□ -1.62
ATXN3-246ENST00000557030 AGTP01019 485 aa4.91□□□□□ -1.62
ATXN3-246ENST00000557030 AFPP02771 609 aaKnown RBP4.91□□□□□ -1.62
ATXN3-246ENST00000557030 ANXA2P07355 339 aaKnown RBP4.91□□□□□ -1.62
ATXN3-246ENST00000557030 DLDP09622 509 aaKnown RBP4.91□□□□□ -1.62
ATXN3-246ENST00000557030 NUDT17P0C025 328 aa4.91□□□□□ -1.62
ATXN3-246ENST00000557030 H2AFZP0C0S5 128 aa4.91□□□□□ -1.62
ATXN3-246ENST00000557030 FAM228BP0C875 321 aa4.91□□□□□ -1.62
ATXN3-246ENST00000557030 GOLGA8HP0CJ92 632 aa4.91□□□□□ -1.62
ATXN3-246ENST00000557030 FERP16591 822 aa4.91□□□□□ -1.62
ATXN3-246ENST00000557030 FPR3P25089 353 aa4.91□□□□□ -1.62
ATXN3-246ENST00000557030 EPHA3P29320 983 aa4.91□□□□□ -1.62
ATXN3-246ENST00000557030 NTSR1P30989 418 aa4.91□□□□□ -1.62
ATXN3-246ENST00000557030 DRG2P55039 364 aaKnown RBP4.91□□□□□ -1.62
ATXN3-246ENST00000557030 MAGOHP61326 146 aaKnown RBP4.91□□□□□ -1.62
ATXN3-246ENST00000557030 GABPAQ06546 454 aa4.91□□□□□ -1.62
ATXN3-246ENST00000557030 RIPK1Q13546 671 aa4.91□□□□□ -1.62
ATXN3-246ENST00000557030 DHX34Q14147 1143 aaKnown RBP4.91□□□□□ -1.62
ATXN3-246ENST00000557030 ASPRV1Q53RT3 343 aa4.91□□□□□ -1.62
ATXN3-246ENST00000557030 ERMARDQ5T6L9 678 aa4.91□□□□□ -1.62
ATXN3-246ENST00000557030 PLAG1Q6DJT9 500 aa4.91□□□□□ -1.62
ATXN3-246ENST00000557030 MTHFD1LQ6UB35 978 aa4.91□□□□□ -1.62
ATXN3-246ENST00000557030 ZNF66Q6ZN08 573 aa4.91□□□□□ -1.62
ATXN3-246ENST00000557030 H2AFVQ71UI9 128 aa4.91□□□□□ -1.62
ATXN3-246ENST00000557030 TAOK1Q7L7X3 1001 aa4.91□□□□□ -1.62
ATXN3-246ENST00000557030 SLFN11Q7Z7L1 901 aa4.91□□□□□ -1.62
ATXN3-246ENST00000557030 DPP9Q86TI2 863 aa4.91□□□□□ -1.62
ATXN3-246ENST00000557030 OR2C3Q8N628 320 aa4.91□□□□□ -1.62
ATXN3-246ENST00000557030 GBP7Q8N8V2 638 aaPredicted RBP4.91□□□□□ -1.62
ATXN3-246ENST00000557030 LRRC57Q8N9N7 239 aa4.91□□□□□ -1.62
ATXN3-246ENST00000557030 ABHD11Q8NFV4 315 aa4.91□□□□□ -1.62
ATXN3-246ENST00000557030 NEK9Q8TD19 979 aa4.91□□□□□ -1.62
ATXN3-246ENST00000557030 CCT6BQ92526 530 aa4.91□□□□□ -1.62
ATXN3-246ENST00000557030 RAPGEF5Q92565 580 aa4.91□□□□□ -1.62
ATXN3-246ENST00000557030 ZNF622Q969S3 477 aaKnown RBP eCLIP4.91□□□□□ -1.62
ATXN3-246ENST00000557030 MAGOHBQ96A72 148 aaKnown RBP4.91□□□□□ -1.62
ATXN3-246ENST00000557030 HVCN1Q96D96 273 aa4.91□□□□□ -1.62
ATXN3-246ENST00000557030 LRRC46Q96FV0 321 aa4.91□□□□□ -1.62
ATXN3-246ENST00000557030 PGM2Q96G03 612 aa4.91□□□□□ -1.62
ATXN3-246ENST00000557030 RSRC1Q96IZ7 334 aaKnown RBP4.91□□□□□ -1.62
ATXN3-246ENST00000557030 XPO6Q96QU8 1125 aaKnown RBP4.91□□□□□ -1.62
ATXN3-246ENST00000557030 EYA3Q99504 573 aa4.91□□□□□ -1.62
ATXN3-246ENST00000557030 FMO2Q99518 471 aa4.91□□□□□ -1.62
ATXN3-246ENST00000557030 TMEM109Q9BVC6 243 aa4.91□□□□□ -1.62
ATXN3-246ENST00000557030 SEMA4CQ9C0C4 833 aa4.91□□□□□ -1.62
ATXN3-246ENST00000557030 UBA5Q9GZZ9 404 aa4.91□□□□□ -1.62
ATXN3-246ENST00000557030 TAOK3Q9H2K8 898 aa4.91□□□□□ -1.62
ATXN3-246ENST00000557030 CPVLQ9H3G5 476 aa4.91□□□□□ -1.62
ATXN3-246ENST00000557030 DDX4Q9NQI0 724 aaKnown RBP4.91□□□□□ -1.62
ATXN3-246ENST00000557030 PANK4Q9NVE7 773 aa4.91□□□□□ -1.62
ATXN3-246ENST00000557030 BCCIPQ9P287 314 aaKnown RBP eCLIP4.91□□□□□ -1.62
ATXN3-246ENST00000557030 MTRF1LQ9UGC7 380 aaKnown RBP4.91□□□□□ -1.62
ATXN3-246ENST00000557030 ARMCX3Q9UH62 379 aaPredicted RBP4.91□□□□□ -1.62
ATXN3-246ENST00000557030 AMFRQ9UKV5 643 aa4.91□□□□□ -1.62
ATXN3-246ENST00000557030 SUFUQ9UMX1 484 aa4.91□□□□□ -1.62
ATXN3-246ENST00000557030 STX8Q9UNK0 236 aa4.91□□□□□ -1.62
ATXN3-246ENST00000557030 QSER1Q2KHR3 1735 aa4.91□□□□□ -1.62
ATXN3-246ENST00000557030 BAZ2BQ9UIF8 2168 aaKnown RBP4.91□□□□□ -1.62
ATXN3-246ENST00000557030 PLIN4Q96Q06 1357 aa4.91□□□□□ -1.62
ATXN3-246ENST00000557030 FOCADQ5VW36 1801 aa4.9□□□□□ -1.62
ATXN3-246ENST00000557030 MYH1P12882 1939 aa4.9□□□□□ -1.62
ATXN3-246ENST00000557030 FRMD3A2A2Y4 597 aa4.9□□□□□ -1.63
ATXN3-246ENST00000557030 GTPBP10A4D1E9 387 aaKnown RBP4.9□□□□□ -1.63
ATXN3-246ENST00000557030 ZSCAN5CA6NGD5 496 aaPredicted RBP4.9□□□□□ -1.63
ATXN3-246ENST00000557030 AQP7P3A6NL99 342 aa4.9□□□□□ -1.63
ATXN3-246ENST00000557030 MIF4GDA9UHW6 222 aaKnown RBP4.9□□□□□ -1.63
ATXN3-246ENST00000557030 FOXN3O00409 490 aaPredicted RBP4.9□□□□□ -1.63
ATXN3-246ENST00000557030 PDXKO00764 312 aa4.9□□□□□ -1.63
ATXN3-246ENST00000557030 INMTO95050 263 aa4.9□□□□□ -1.63
ATXN3-246ENST00000557030 GGPS1O95749 300 aa4.9□□□□□ -1.63
ATXN3-246ENST00000557030 PRKCBP05771 671 aa4.9□□□□□ -1.63
ATXN3-246ENST00000557030 SNHG28P0DPA3 235 aa4.9□□□□□ -1.63
ATXN3-246ENST00000557030 AKR1B1P15121 316 aa4.9□□□□□ -1.63
ATXN3-246ENST00000557030 UCHL3P15374 230 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms