RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 ENDOD1O94919 500 aa10.16□□□□□ -0.78
SCFD1-220ENST00000556486 LSM8O95777 96 aaKnown RBP10.16□□□□□ -0.78
SCFD1-220ENST00000556486 RHOCP08134 193 aa10.16□□□□□ -0.78
SCFD1-220ENST00000556486 CELA2BP08218 269 aaPredicted RBP10.16□□□□□ -0.78
SCFD1-220ENST00000556486 ITGA2BP08514 1039 aa10.16□□□□□ -0.78
SCFD1-220ENST00000556486 CYP11B1P15538 503 aa10.16□□□□□ -0.78
SCFD1-220ENST00000556486 ITGB7P26010 798 aa10.16□□□□□ -0.78
SCFD1-220ENST00000556486 UGT1A5P35504 534 aa10.16□□□□□ -0.78
SCFD1-220ENST00000556486 HNRNPKP61978 463 aaKnown RBP eCLIP10.16□□□□□ -0.78
SCFD1-220ENST00000556486 NRG1Q02297 640 aaPredicted RBP10.16□□□□□ -0.78
SCFD1-220ENST00000556486 HYAL2Q12891 473 aa10.16□□□□□ -0.78
SCFD1-220ENST00000556486 PDE1CQ14123 709 aaPredicted RBP10.16□□□□□ -0.78
SCFD1-220ENST00000556486 SPIDRQ14159 915 aa10.16□□□□□ -0.78
SCFD1-220ENST00000556486 FGL2Q14314 439 aa10.16□□□□□ -0.78
SCFD1-220ENST00000556486 NR0B2Q15466 257 aa10.16□□□□□ -0.78
SCFD1-220ENST00000556486 EFHC2Q5JST6 749 aa10.16□□□□□ -0.78
SCFD1-220ENST00000556486 RETSATQ6NUM9 610 aa10.16□□□□□ -0.78
SCFD1-220ENST00000556486 C22orf39Q6P5X5 142 aa10.16□□□□□ -0.78
SCFD1-220ENST00000556486 LRRC31Q6UY01 552 aa10.16□□□□□ -0.78
SCFD1-220ENST00000556486 ZFAND4Q86XD8 727 aa10.16□□□□□ -0.78
SCFD1-220ENST00000556486 XYLT1Q86Y38 959 aa10.16□□□□□ -0.78
SCFD1-220ENST00000556486 SLC35F3Q8IY50 421 aa10.16□□□□□ -0.78
SCFD1-220ENST00000556486 FBXO39Q8N4B4 442 aa10.16□□□□□ -0.78
SCFD1-220ENST00000556486 PCDH20Q8N6Y1 951 aaKnown RBP10.16□□□□□ -0.78
SCFD1-220ENST00000556486 CHST14Q8NCH0 376 aa10.16□□□□□ -0.78
SCFD1-220ENST00000556486 HTR3CQ8WXA8 447 aa10.16□□□□□ -0.78
SCFD1-220ENST00000556486 ISG20Q96AZ6 181 aaKnown RBP10.16□□□□□ -0.78
SCFD1-220ENST00000556486 C18orf8Q96DM3 657 aa10.16□□□□□ -0.78
SCFD1-220ENST00000556486 PPP1R16AQ96I34 528 aa10.16□□□□□ -0.78
SCFD1-220ENST00000556486 BMFQ96LC9 184 aa10.16□□□□□ -0.78
SCFD1-220ENST00000556486 DUSP23Q9BVJ7 150 aa10.16□□□□□ -0.78
SCFD1-220ENST00000556486 NAA15Q9BXJ9 866 aaKnown RBP10.16□□□□□ -0.78
SCFD1-220ENST00000556486 SIK2Q9H0K1 926 aa10.16□□□□□ -0.78
SCFD1-220ENST00000556486 SYNCQ9H7C4 482 aa10.16□□□□□ -0.78
SCFD1-220ENST00000556486 PPARGC1AQ9UBK2 798 aaKnown RBP10.16□□□□□ -0.78
SCFD1-220ENST00000556486 PISDQ9UG56 409 aa10.16□□□□□ -0.78
SCFD1-220ENST00000556486 IPO11Q9UI26 975 aaKnown RBP10.16□□□□□ -0.78
SCFD1-220ENST00000556486 TMEM59LQ9UK28 342 aa10.16□□□□□ -0.78
SCFD1-220ENST00000556486 HS3ST3A1Q9Y663 406 aa10.16□□□□□ -0.78
SCFD1-220ENST00000556486 TEP1Q99973 2627 aaKnown RBP10.16□□□□□ -0.78
SCFD1-220ENST00000556486 EME2A4GXA9 379 aaPredicted RBP10.15□□□□□ -0.78
SCFD1-220ENST00000556486 FIGNL2A6NMB9 653 aa10.15□□□□□ -0.78
SCFD1-220ENST00000556486 PLD2O14939 933 aa10.15□□□□□ -0.78
SCFD1-220ENST00000556486 PPFIA2O75334 1257 aa10.15□□□□□ -0.78
SCFD1-220ENST00000556486 GCATO75600 419 aa10.15□□□□□ -0.78
SCFD1-220ENST00000556486 PAK4O96013 591 aaPredicted RBP10.15□□□□□ -0.78
SCFD1-220ENST00000556486 ITIH1P19827 911 aa10.15□□□□□ -0.78
SCFD1-220ENST00000556486 CR2P20023 1033 aa10.15□□□□□ -0.78
SCFD1-220ENST00000556486 RRM1P23921 792 aa10.15□□□□□ -0.78
SCFD1-220ENST00000556486 OR1E1P30953 314 aa10.15□□□□□ -0.78
SCFD1-220ENST00000556486 SOX18P35713 384 aa10.15□□□□□ -0.78
SCFD1-220ENST00000556486 FLT3P36888 993 aa10.15□□□□□ -0.78
SCFD1-220ENST00000556486 SERPINH1P50454 418 aaKnown RBP10.15□□□□□ -0.78
SCFD1-220ENST00000556486 ADKP55263 362 aaKnown RBP10.15□□□□□ -0.78
SCFD1-220ENST00000556486 UBE2HP62256 183 aa10.15□□□□□ -0.78
SCFD1-220ENST00000556486 RPS26P62854 115 aaKnown RBP10.15□□□□□ -0.78
SCFD1-220ENST00000556486 RPS21P63220 83 aaKnown RBP10.15□□□□□ -0.78
SCFD1-220ENST00000556486 DEUP1Q05D60 604 aa10.15□□□□□ -0.78
SCFD1-220ENST00000556486 SPRED3Q2MJR0 410 aa10.15□□□□□ -0.78
SCFD1-220ENST00000556486 PRRT3Q5FWE3 981 aa10.15□□□□□ -0.78
SCFD1-220ENST00000556486 MIIPQ5JXC2 388 aa10.15□□□□□ -0.78
SCFD1-220ENST00000556486 LCE2AQ5TA79 106 aaPredicted RBP10.15□□□□□ -0.78
SCFD1-220ENST00000556486 MANEALQ5VSG8 457 aa10.15□□□□□ -0.78
SCFD1-220ENST00000556486 KIAA1161Q6NSJ0 714 aa10.15□□□□□ -0.78
SCFD1-220ENST00000556486 LINGO4Q6UY18 593 aa10.15□□□□□ -0.78
SCFD1-220ENST00000556486 KYAT3Q6YP21 454 aaKnown RBP10.15□□□□□ -0.78
SCFD1-220ENST00000556486 DPY19L3Q6ZPD9 716 aa10.15□□□□□ -0.78
SCFD1-220ENST00000556486 RAB11FIP2Q7L804 512 aa10.15□□□□□ -0.78
SCFD1-220ENST00000556486 PARGQ86W56 976 aa10.15□□□□□ -0.78
SCFD1-220ENST00000556486 FAM114A1Q8IWE2 563 aa10.15□□□□□ -0.78
SCFD1-220ENST00000556486 ASB12Q8WXK4 309 aa10.15□□□□□ -0.78
SCFD1-220ENST00000556486 VOPP1Q96AW1 172 aa10.15□□□□□ -0.78
SCFD1-220ENST00000556486 LENG8Q96PV6 779 aaPredicted RBP10.15□□□□□ -0.78
SCFD1-220ENST00000556486 TBCBQ99426 244 aa10.15□□□□□ -0.78
SCFD1-220ENST00000556486 IL12RB2Q99665 862 aa10.15□□□□□ -0.78
SCFD1-220ENST00000556486 TNKS2Q9H2K2 1166 aa10.15□□□□□ -0.78
SCFD1-220ENST00000556486 NDST4Q9H3R1 872 aa10.15□□□□□ -0.78
SCFD1-220ENST00000556486 DYRK4Q9NR20 520 aa10.15□□□□□ -0.78
SCFD1-220ENST00000556486 GULP1Q9UBP9 304 aa10.15□□□□□ -0.78
SCFD1-220ENST00000556486 IL36AQ9UHA7 158 aa10.15□□□□□ -0.78
SCFD1-220ENST00000556486 PNMA8BQ9ULN7 279 aaPredicted RBP10.15□□□□□ -0.78
SCFD1-220ENST00000556486 PPT2Q9UMR5 302 aa10.15□□□□□ -0.78
SCFD1-220ENST00000556486 MAN2B2Q9Y2E5 1009 aa10.15□□□□□ -0.78
SCFD1-220ENST00000556486 CSNK1G3Q9Y6M4 447 aa10.15□□□□□ -0.78
SCFD1-220ENST00000556486 CHD5Q8TDI0 1954 aa10.15□□□□□ -0.78
SCFD1-220ENST00000556486 USP9YO00507 2555 aaPredicted RBP10.15□□□□□ -0.79
SCFD1-220ENST00000556486 SPENQ96T58 3664 aaKnown RBP10.14□□□□□ -0.79
SCFD1-220ENST00000556486 PRAMEF33A0A0G2JMD5 474 aa10.14□□□□□ -0.79
SCFD1-220ENST00000556486 SPTY2D1-AS1A0A0U1RR47 76 aa10.14□□□□□ -0.79
SCFD1-220ENST00000556486 BLACEA4D250 179 aa10.14□□□□□ -0.79
SCFD1-220ENST00000556486 H3BM21 787 aa10.14□□□□□ -0.79
SCFD1-220ENST00000556486 PRAMEF10O60809 474 aa10.14□□□□□ -0.79
SCFD1-220ENST00000556486 LEFTY1O75610 366 aa10.14□□□□□ -0.79
SCFD1-220ENST00000556486 CD160O95971 181 aa10.14□□□□□ -0.79
SCFD1-220ENST00000556486 CSF2P04141 144 aa10.14□□□□□ -0.79
SCFD1-220ENST00000556486 ITGB2P05107 769 aa10.14□□□□□ -0.79
SCFD1-220ENST00000556486 FAM157BP0CG42 384 aa10.14□□□□□ -0.79
SCFD1-220ENST00000556486 PNMA6AP0CW24 399 aaPredicted RBP10.14□□□□□ -0.79
SCFD1-220ENST00000556486 ADRB3P13945 408 aa10.14□□□□□ -0.79
SCFD1-220ENST00000556486 NME1P15531 152 aaKnown RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms