RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 OR2T34Q8NGX1 318 aa14.11□□□□□ -0.15
VIPAS39-208ENST00000556412 CXorf40AQ8TE69 158 aa14.11□□□□□ -0.15
VIPAS39-208ENST00000556412 HINFPQ9BQA5 517 aa14.11□□□□□ -0.15
VIPAS39-208ENST00000556412 C6orf106Q9H6K1 298 aaPredicted RBP14.11□□□□□ -0.15
VIPAS39-208ENST00000556412 PCDHGA2Q9Y5H1 932 aa14.11□□□□□ -0.15
VIPAS39-208ENST00000556412 A0A0J9YYE9 177 aa14.1□□□□□ -0.15
VIPAS39-208ENST00000556412 CAPN8A6NHC0 703 aa14.1□□□□□ -0.15
VIPAS39-208ENST00000556412 ERI2A8K979 691 aaKnown RBP14.1□□□□□ -0.15
VIPAS39-208ENST00000556412 EFCAB8A8MWE9 144 aa14.1□□□□□ -0.15
VIPAS39-208ENST00000556412 AREL1O15033 823 aa14.1□□□□□ -0.15
VIPAS39-208ENST00000556412 SPINT1O43278 529 aa14.1□□□□□ -0.15
VIPAS39-208ENST00000556412 MMP20O60882 483 aa14.1□□□□□ -0.15
VIPAS39-208ENST00000556412 RNGTTO60942 597 aaKnown RBP14.1□□□□□ -0.15
VIPAS39-208ENST00000556412 EPOP01588 193 aa14.1□□□□□ -0.15
VIPAS39-208ENST00000556412 TRBC1P01850 177 aa14.1□□□□□ -0.15
VIPAS39-208ENST00000556412 CYP2A6P11509 494 aaPredicted RBP14.1□□□□□ -0.15
VIPAS39-208ENST00000556412 ADRA1AP35348 466 aa14.1□□□□□ -0.15
VIPAS39-208ENST00000556412 MMP12P39900 470 aa14.1□□□□□ -0.15
VIPAS39-208ENST00000556412 SUOXP51687 545 aa14.1□□□□□ -0.15
VIPAS39-208ENST00000556412 PPP2CBP62714 309 aa14.1□□□□□ -0.15
VIPAS39-208ENST00000556412 PPP2CAP67775 309 aa14.1□□□□□ -0.15
VIPAS39-208ENST00000556412 SEL1L3Q68CR1 1132 aa14.1□□□□□ -0.15
VIPAS39-208ENST00000556412 PRR23BQ6ZRT6 265 aa14.1□□□□□ -0.15
VIPAS39-208ENST00000556412 TSPAN33Q86UF1 283 aa14.1□□□□□ -0.15
VIPAS39-208ENST00000556412 NOA1Q8NC60 698 aaKnown RBP14.1□□□□□ -0.15
VIPAS39-208ENST00000556412 OR52K1Q8NGK4 314 aa14.1□□□□□ -0.15
VIPAS39-208ENST00000556412 BLOC1S5Q8TDH9 187 aa14.1□□□□□ -0.15
VIPAS39-208ENST00000556412 NELL1Q92832 810 aa14.1□□□□□ -0.15
VIPAS39-208ENST00000556412 KLK6Q92876 244 aa14.1□□□□□ -0.15
VIPAS39-208ENST00000556412 FAM131CQ96AQ9 280 aa14.1□□□□□ -0.15
VIPAS39-208ENST00000556412 SCRN2Q96FV2 425 aa14.1□□□□□ -0.15
VIPAS39-208ENST00000556412 PRRX2Q99811 253 aa14.1□□□□□ -0.15
VIPAS39-208ENST00000556412 DPH5Q9H2P9 285 aa14.1□□□□□ -0.15
VIPAS39-208ENST00000556412 PREBQ9HCU5 417 aa14.1□□□□□ -0.15
VIPAS39-208ENST00000556412 SHOC2Q9UQ13 582 aa14.1□□□□□ -0.15
VIPAS39-208ENST00000556412 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.09□□□□□ -0.15
VIPAS39-208ENST00000556412 C1orf232A0A0U1RR37 186 aa14.09□□□□□ -0.15
VIPAS39-208ENST00000556412 A0A1W2PQU0 124 aa14.09□□□□□ -0.15
VIPAS39-208ENST00000556412 TCRBV7S3A2A0A539 114 aa14.09□□□□□ -0.15
VIPAS39-208ENST00000556412 FAM187AA6NFU0 413 aa14.09□□□□□ -0.15
VIPAS39-208ENST00000556412 GOLGA8MH3BSY2 632 aa14.09□□□□□ -0.15
VIPAS39-208ENST00000556412 TSPAN6O43657 245 aa14.09□□□□□ -0.15
VIPAS39-208ENST00000556412 AP1G1O43747 822 aa14.09□□□□□ -0.15
VIPAS39-208ENST00000556412 FGF1P05230 155 aa14.09□□□□□ -0.15
VIPAS39-208ENST00000556412 ELFN1P0C7U0 828 aa14.09□□□□□ -0.15
VIPAS39-208ENST00000556412 TPH1P17752 444 aa14.09□□□□□ -0.15
VIPAS39-208ENST00000556412 VIPR1P32241 457 aa14.09□□□□□ -0.15
VIPAS39-208ENST00000556412 GRIA1P42261 906 aa14.09□□□□□ -0.15
VIPAS39-208ENST00000556412 SLC7A5Q01650 507 aa14.09□□□□□ -0.15
VIPAS39-208ENST00000556412 MTM1Q13496 603 aa14.09□□□□□ -0.15
VIPAS39-208ENST00000556412 ARHGEF7Q14155 803 aa14.09□□□□□ -0.15
VIPAS39-208ENST00000556412 ANKRD22Q5VYY1 191 aa14.09□□□□□ -0.15
VIPAS39-208ENST00000556412 IZUMO3Q5VZ72 239 aa14.09□□□□□ -0.15
VIPAS39-208ENST00000556412 RANBP10Q6VN20 620 aa14.09□□□□□ -0.15
VIPAS39-208ENST00000556412 DPPA4Q7L190 304 aa14.09□□□□□ -0.15
VIPAS39-208ENST00000556412 LPCAT2Q7L5N7 544 aa14.09□□□□□ -0.15
VIPAS39-208ENST00000556412 LINC00523Q86TU6 105 aa14.09□□□□□ -0.15
VIPAS39-208ENST00000556412 ZBTB44Q8NCP5 570 aa14.09□□□□□ -0.15
VIPAS39-208ENST00000556412 CPT1BQ92523 772 aa14.09□□□□□ -0.15
VIPAS39-208ENST00000556412 SPOCK2Q92563 424 aa14.09□□□□□ -0.15
VIPAS39-208ENST00000556412 LRRC1Q9BTT6 524 aa14.09□□□□□ -0.15
VIPAS39-208ENST00000556412 L2HGDHQ9H9P8 463 aa14.09□□□□□ -0.15
VIPAS39-208ENST00000556412 MEI4A8MW99 385 aa14.08□□□□□ -0.15
VIPAS39-208ENST00000556412 LHCGRP22888 699 aa14.08□□□□□ -0.15
VIPAS39-208ENST00000556412 CNR2P34972 360 aa14.08□□□□□ -0.15
VIPAS39-208ENST00000556412 LIG3P49916 1009 aa14.08□□□□□ -0.15
VIPAS39-208ENST00000556412 TCF15Q12870 199 aa14.08□□□□□ -0.15
VIPAS39-208ENST00000556412 SIM2Q14190 667 aaPredicted RBP14.08□□□□□ -0.15
VIPAS39-208ENST00000556412 LPAL2Q16609 132 aa14.08□□□□□ -0.15
VIPAS39-208ENST00000556412 LRRC66Q68CR7 880 aa14.08□□□□□ -0.15
VIPAS39-208ENST00000556412 KIAA0895LQ68EN5 471 aa14.08□□□□□ -0.15
VIPAS39-208ENST00000556412 ZC3H14Q6PJT7 736 aaKnown RBP14.08□□□□□ -0.15
VIPAS39-208ENST00000556412 KLHDC8BQ8IXV7 354 aa14.08□□□□□ -0.15
VIPAS39-208ENST00000556412 HSPA12BQ96MM6 686 aa14.08□□□□□ -0.15
VIPAS39-208ENST00000556412 MCCC1Q96RQ3 725 aaPredicted RBP14.08□□□□□ -0.15
VIPAS39-208ENST00000556412 KDM4CQ9H3R0 1056 aa14.08□□□□□ -0.15
VIPAS39-208ENST00000556412 EIF2B3Q9NR50 452 aaKnown RBP14.08□□□□□ -0.15
VIPAS39-208ENST00000556412 TPX2Q9ULW0 747 aaKnown RBP14.08□□□□□ -0.15
VIPAS39-208ENST00000556412 COQ6Q9Y2Z9 468 aa14.08□□□□□ -0.15
VIPAS39-208ENST00000556412 SNX24Q9Y343 169 aa14.08□□□□□ -0.15
VIPAS39-208ENST00000556412 UTP11Q9Y3A2 253 aaKnown RBP14.08□□□□□ -0.15
VIPAS39-208ENST00000556412 SPO11Q9Y5K1 396 aa14.08□□□□□ -0.15
VIPAS39-208ENST00000556412 SHROOM3Q8TF72 1996 aa14.08□□□□□ -0.16
VIPAS39-208ENST00000556412 CKAP5Q14008 2032 aa14.08□□□□□ -0.16
VIPAS39-208ENST00000556412 IGLON5A6NGN9 336 aa14.08□□□□□ -0.16
VIPAS39-208ENST00000556412 DNALI1O14645 258 aaPredicted RBP14.08□□□□□ -0.16
VIPAS39-208ENST00000556412 LZTS3O60299 673 aaPredicted RBP14.08□□□□□ -0.16
VIPAS39-208ENST00000556412 DHPSP49366 369 aaPredicted RBP14.08□□□□□ -0.16
VIPAS39-208ENST00000556412 RPS21P63220 83 aaKnown RBP14.08□□□□□ -0.16
VIPAS39-208ENST00000556412 RALGDSQ12967 914 aa14.08□□□□□ -0.16
VIPAS39-208ENST00000556412 KCNJ11Q14654 390 aa14.08□□□□□ -0.16
VIPAS39-208ENST00000556412 ACOX1Q15067 660 aa14.08□□□□□ -0.16
VIPAS39-208ENST00000556412 ELF2Q15723 593 aa14.08□□□□□ -0.16
VIPAS39-208ENST00000556412 CNGA3Q16281 694 aa14.08□□□□□ -0.16
VIPAS39-208ENST00000556412 TMEM52BQ4KMG9 183 aa14.08□□□□□ -0.16
VIPAS39-208ENST00000556412 CRTC1Q6UUV9 634 aa14.08□□□□□ -0.16
VIPAS39-208ENST00000556412 LYSMD3Q7Z3D4 306 aa14.08□□□□□ -0.16
VIPAS39-208ENST00000556412 C11orf74Q86VG3 221 aa14.08□□□□□ -0.16
VIPAS39-208ENST00000556412 HORMAD1Q86X24 394 aa14.08□□□□□ -0.16
VIPAS39-208ENST00000556412 PPIL6Q8IXY8 311 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms