RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 EIF2B5Q13144 721 aaKnown RBP20.6■□□□□ 0.89
VTI1B-205ENST00000555543 DNAJC3Q13217 504 aa20.6■□□□□ 0.89
VTI1B-205ENST00000555543 AGERQ15109 404 aa20.6■□□□□ 0.89
VTI1B-205ENST00000555543 PTPRRQ15256 657 aa20.6■□□□□ 0.89
VTI1B-205ENST00000555543 C11orf63Q6NUN7 778 aa20.6■□□□□ 0.89
VTI1B-205ENST00000555543 RFX6Q8HWS3 928 aa20.6■□□□□ 0.89
VTI1B-205ENST00000555543 CCDC13Q8IYE1 715 aa20.6■□□□□ 0.89
VTI1B-205ENST00000555543 ACRBPQ8NEB7 543 aa20.6■□□□□ 0.89
VTI1B-205ENST00000555543 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.6■□□□□ 0.89
VTI1B-205ENST00000555543 RBM22Q9NW64 420 aaKnown RBP eCLIP20.6■□□□□ 0.89
VTI1B-205ENST00000555543 TTLL3Q9Y4R7 772 aa20.6■□□□□ 0.89
VTI1B-205ENST00000555543 RAI2Q9Y5P3 530 aa20.6■□□□□ 0.89
VTI1B-205ENST00000555543 DUSP10Q9Y6W6 482 aa20.6■□□□□ 0.89
VTI1B-205ENST00000555543 TDRD6O60522 2096 aaKnown RBP20.6■□□□□ 0.89
VTI1B-205ENST00000555543 WDFY3Q8IZQ1 3526 aa20.6■□□□□ 0.89
VTI1B-205ENST00000555543 IGF2RP11717 2491 aa20.59■□□□□ 0.89
VTI1B-205ENST00000555543 KCNK1O00180 336 aa20.59■□□□□ 0.89
VTI1B-205ENST00000555543 ENC1O14682 589 aa20.59■□□□□ 0.89
VTI1B-205ENST00000555543 FFAR2O15552 330 aa20.59■□□□□ 0.89
VTI1B-205ENST00000555543 LZTS3O60299 673 aaPredicted RBP20.59■□□□□ 0.89
VTI1B-205ENST00000555543 RECQL5O94762 991 aaPredicted RBP20.59■□□□□ 0.89
VTI1B-205ENST00000555543 PGLSO95336 258 aa20.59■□□□□ 0.89
VTI1B-205ENST00000555543 CSF2P04141 144 aa20.59■□□□□ 0.89
VTI1B-205ENST00000555543 PDHA1P08559 390 aa20.59■□□□□ 0.89
VTI1B-205ENST00000555543 GIMD1P0DJR0 217 aa20.59■□□□□ 0.89
VTI1B-205ENST00000555543 CDC25BP30305 580 aa20.59■□□□□ 0.89
VTI1B-205ENST00000555543 CDKN2BP42772 138 aa20.59■□□□□ 0.89
VTI1B-205ENST00000555543 DYNLT1P63172 113 aa20.59■□□□□ 0.89
VTI1B-205ENST00000555543 PPIDQ08752 370 aaKnown RBP20.59■□□□□ 0.89
VTI1B-205ENST00000555543 ZBTB17Q13105 803 aa20.59■□□□□ 0.89
VTI1B-205ENST00000555543 LLGL1Q15334 1064 aa20.59■□□□□ 0.89
VTI1B-205ENST00000555543 TAZQ16635 292 aa20.59■□□□□ 0.89
VTI1B-205ENST00000555543 CCDC157Q569K6 752 aa20.59■□□□□ 0.89
VTI1B-205ENST00000555543 PLA2G15Q8NCC3 412 aa20.59■□□□□ 0.89
VTI1B-205ENST00000555543 TPCN2Q8NHX9 752 aa20.59■□□□□ 0.89
VTI1B-205ENST00000555543 ARRDC2Q8TBH0 407 aa20.59■□□□□ 0.89
VTI1B-205ENST00000555543 ZNF830Q96NB3 372 aaPredicted RBP20.59■□□□□ 0.89
VTI1B-205ENST00000555543 OLFM3Q96PB7 478 aa20.59■□□□□ 0.89
VTI1B-205ENST00000555543 SMIM14Q96QK8 99 aa20.59■□□□□ 0.89
VTI1B-205ENST00000555543 TMEM121BQ9BXQ6 578 aaPredicted RBP20.59■□□□□ 0.89
VTI1B-205ENST00000555543 MAK16Q9BXY0 300 aaKnown RBP20.59■□□□□ 0.89
VTI1B-205ENST00000555543 LACRTQ9GZZ8 138 aa20.59■□□□□ 0.89
VTI1B-205ENST00000555543 LUC7LQ9NQ29 371 aaKnown RBP20.59■□□□□ 0.89
VTI1B-205ENST00000555543 NEUROG3Q9Y4Z2 214 aa20.59■□□□□ 0.89
VTI1B-205ENST00000555543 A0A1W2PQ67 120 aa20.58■□□□□ 0.89
VTI1B-205ENST00000555543 CFAP69A5D8W1 941 aa20.58■□□□□ 0.89
VTI1B-205ENST00000555543 SIGLEC6O43699 453 aa20.58■□□□□ 0.89
VTI1B-205ENST00000555543 FZD6O60353 706 aa20.58■□□□□ 0.89
VTI1B-205ENST00000555543 PCCBP05166 539 aa20.58■□□□□ 0.89
VTI1B-205ENST00000555543 KRT10P13645 584 aa20.58■□□□□ 0.89
VTI1B-205ENST00000555543 LHCGRP22888 699 aa20.58■□□□□ 0.89
VTI1B-205ENST00000555543 THOP1P52888 689 aa20.58■□□□□ 0.89
VTI1B-205ENST00000555543 YPEL5P62699 121 aa20.58■□□□□ 0.89
VTI1B-205ENST00000555543 NIPAL4Q0D2K0 466 aa20.58■□□□□ 0.89
VTI1B-205ENST00000555543 CNGA3Q16281 694 aa20.58■□□□□ 0.89
VTI1B-205ENST00000555543 ARMC12Q5T9G4 340 aa20.58■□□□□ 0.89
VTI1B-205ENST00000555543 SPOCD1Q6ZMY3 1216 aa20.58■□□□□ 0.89
VTI1B-205ENST00000555543 NYAP1Q6ZVC0 841 aa20.58■□□□□ 0.89
VTI1B-205ENST00000555543 B4GALNT4Q76KP1 1039 aa20.58■□□□□ 0.89
VTI1B-205ENST00000555543 RBFAQ8N0V3 343 aa20.58■□□□□ 0.89
VTI1B-205ENST00000555543 SPC24Q8NBT2 197 aa20.58■□□□□ 0.89
VTI1B-205ENST00000555543 ZNF548Q8NEK5 533 aaPredicted RBP20.58■□□□□ 0.89
VTI1B-205ENST00000555543 PIH1D2Q8WWB5 315 aa20.58■□□□□ 0.89
VTI1B-205ENST00000555543 KRT35Q92764 455 aa20.58■□□□□ 0.89
VTI1B-205ENST00000555543 ANP32EQ9BTT0 268 aa20.58■□□□□ 0.89
VTI1B-205ENST00000555543 TCEAL2Q9H3H9 227 aaPredicted RBP20.58■□□□□ 0.89
VTI1B-205ENST00000555543 AMACRQ9UHK6 382 aa20.58■□□□□ 0.89
VTI1B-205ENST00000555543 PHTF1Q9UMS5 762 aa20.58■□□□□ 0.89
VTI1B-205ENST00000555543 A0A0U1RQS6 177 aa20.57■□□□□ 0.88
VTI1B-205ENST00000555543 NPIPB15A6NHN6 443 aaPredicted RBP20.57■□□□□ 0.88
VTI1B-205ENST00000555543 NEBLO76041 1014 aa20.57■□□□□ 0.88
VTI1B-205ENST00000555543 JCHAINP01591 159 aa20.57■□□□□ 0.88
VTI1B-205ENST00000555543 VIPR1P32241 457 aa20.57■□□□□ 0.88
VTI1B-205ENST00000555543 ACADVLP49748 655 aa20.57■□□□□ 0.88
VTI1B-205ENST00000555543 HNRNPKP61978 463 aaKnown RBP eCLIP20.57■□□□□ 0.88
VTI1B-205ENST00000555543 IFI35P80217 286 aaPredicted RBP20.57■□□□□ 0.88
VTI1B-205ENST00000555543 ADCY2Q08462 1091 aa20.57■□□□□ 0.88
VTI1B-205ENST00000555543 INPP5AQ14642 412 aa20.57■□□□□ 0.88
VTI1B-205ENST00000555543 PROX2Q3B8N5 592 aa20.57■□□□□ 0.88
VTI1B-205ENST00000555543 ODF2Q5BJF6 829 aa20.57■□□□□ 0.88
VTI1B-205ENST00000555543 MACC1Q6ZN28 852 aa20.57■□□□□ 0.88
VTI1B-205ENST00000555543 DAAM2Q86T65 1068 aa20.57■□□□□ 0.88
VTI1B-205ENST00000555543 KATNAL2Q8IYT4 538 aa20.57■□□□□ 0.88
VTI1B-205ENST00000555543 PELI3Q8N2H9 469 aa20.57■□□□□ 0.88
VTI1B-205ENST00000555543 CNTD1Q8N815 330 aa20.57■□□□□ 0.88
VTI1B-205ENST00000555543 OR4C6Q8NH72 309 aa20.57■□□□□ 0.88
VTI1B-205ENST00000555543 COQ10AQ96MF6 247 aa20.57■□□□□ 0.88
VTI1B-205ENST00000555543 MCCC1Q96RQ3 725 aaPredicted RBP20.57■□□□□ 0.88
VTI1B-205ENST00000555543 IL12RB2Q99665 862 aa20.57■□□□□ 0.88
VTI1B-205ENST00000555543 BAG1Q99933 345 aaPredicted RBP20.57■□□□□ 0.88
VTI1B-205ENST00000555543 CEP41Q9BYV8 373 aa20.57■□□□□ 0.88
VTI1B-205ENST00000555543 USP24Q9UPU5 2620 aa20.57■□□□□ 0.88
VTI1B-205ENST00000555543 OR1A2Q9Y585 309 aa20.57■□□□□ 0.88
VTI1B-205ENST00000555543 PTPRBP23467 1997 aa20.56■□□□□ 0.88
VTI1B-205ENST00000555543 FAM221BA6H8Z2 402 aa20.56■□□□□ 0.88
VTI1B-205ENST00000555543 C1QTNF9BB2RNN3 333 aa20.56■□□□□ 0.88
VTI1B-205ENST00000555543 TOR1BO14657 336 aa20.56■□□□□ 0.88
VTI1B-205ENST00000555543 HEXIM1O94992 359 aaKnown RBP20.56■□□□□ 0.88
VTI1B-205ENST00000555543 IPO7O95373 1038 aaKnown RBP20.56■□□□□ 0.88
VTI1B-205ENST00000555543 ALPIP09923 528 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms