RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 RNFT2Q96EX2 444 aa2.97□□□□□ -1.93
SRP54-207ENST00000555535 MASTLQ96GX5 879 aa2.97□□□□□ -1.93
SRP54-207ENST00000555535 RMDN3Q96TC7 470 aa2.97□□□□□ -1.93
SRP54-207ENST00000555535 TAF1DQ9H5J8 278 aaPredicted RBP2.97□□□□□ -1.93
SRP54-207ENST00000555535 CYSLTR2Q9NS75 346 aa2.97□□□□□ -1.93
SRP54-207ENST00000555535 DACT1Q9NYF0 836 aa2.97□□□□□ -1.93
SRP54-207ENST00000555535 NDRG3Q9UGV2 375 aa2.97□□□□□ -1.93
SRP54-207ENST00000555535 CD207Q9UJ71 328 aa2.97□□□□□ -1.93
SRP54-207ENST00000555535 TP53TG3Q9ULZ0 132 aa2.97□□□□□ -1.93
SRP54-207ENST00000555535 PSAT1Q9Y617 370 aa2.97□□□□□ -1.93
SRP54-207ENST00000555535 HMX3A6NHT5 357 aa2.96□□□□□ -1.94
SRP54-207ENST00000555535 CAPN9O14815 690 aa2.96□□□□□ -1.94
SRP54-207ENST00000555535 SEPT4O43236 478 aa2.96□□□□□ -1.94
SRP54-207ENST00000555535 HBP1O60381 514 aa2.96□□□□□ -1.94
SRP54-207ENST00000555535 CAND2O75155 1236 aa2.96□□□□□ -1.94
SRP54-207ENST00000555535 NDUFS7O75251 213 aa2.96□□□□□ -1.94
SRP54-207ENST00000555535 TFPIP10646 304 aa2.96□□□□□ -1.94
SRP54-207ENST00000555535 SRD5A1P18405 259 aa2.96□□□□□ -1.94
SRP54-207ENST00000555535 RXRAP19793 462 aa2.96□□□□□ -1.94
SRP54-207ENST00000555535 RYKP34925 604 aa2.96□□□□□ -1.94
SRP54-207ENST00000555535 HNF1BP35680 557 aa2.96□□□□□ -1.94
SRP54-207ENST00000555535 SLC8A3P57103 927 aa2.96□□□□□ -1.94
SRP54-207ENST00000555535 AMZ1Q400G9 498 aa2.96□□□□□ -1.94
SRP54-207ENST00000555535 GHDCQ8N2G8 530 aa2.96□□□□□ -1.94
SRP54-207ENST00000555535 AMER3Q8N944 861 aa2.96□□□□□ -1.94
SRP54-207ENST00000555535 ANKRD52Q8NB46 1076 aa2.96□□□□□ -1.94
SRP54-207ENST00000555535 OR6Y1Q8NGX8 325 aa2.96□□□□□ -1.94
SRP54-207ENST00000555535 TMEM170AQ8WVE7 144 aa2.96□□□□□ -1.94
SRP54-207ENST00000555535 TMEM19Q96HH6 336 aa2.96□□□□□ -1.94
SRP54-207ENST00000555535 ELAC2Q9BQ52 826 aaKnown RBP2.96□□□□□ -1.94
SRP54-207ENST00000555535 CSTL1Q9H114 145 aa2.96□□□□□ -1.94
SRP54-207ENST00000555535 FAM118AQ9NWS6 357 aa2.96□□□□□ -1.94
SRP54-207ENST00000555535 SRP68Q9UHB9 627 aaKnown RBP2.96□□□□□ -1.94
SRP54-207ENST00000555535 A0A0J9YWU9 116 aa2.95□□□□□ -1.94
SRP54-207ENST00000555535 EBAG9O00559 213 aa2.95□□□□□ -1.94
SRP54-207ENST00000555535 SOCS6O14544 535 aa2.95□□□□□ -1.94
SRP54-207ENST00000555535 ATP2C2O75185 946 aa2.95□□□□□ -1.94
SRP54-207ENST00000555535 KRT18P05783 430 aaKnown RBP2.95□□□□□ -1.94
SRP54-207ENST00000555535 HLA-DOBP13765 273 aa2.95□□□□□ -1.94
SRP54-207ENST00000555535 ITGAXP20702 1163 aa2.95□□□□□ -1.94
SRP54-207ENST00000555535 FMO5P49326 533 aa2.95□□□□□ -1.94
SRP54-207ENST00000555535 PITX1P78337 314 aaPredicted RBP2.95□□□□□ -1.94
SRP54-207ENST00000555535 TNFAIP2Q03169 654 aa2.95□□□□□ -1.94
SRP54-207ENST00000555535 RELQ04864 619 aaPredicted RBP2.95□□□□□ -1.94
SRP54-207ENST00000555535 SLC18A3Q16572 532 aa2.95□□□□□ -1.94
SRP54-207ENST00000555535 SOWAHAQ2M3V2 549 aa2.95□□□□□ -1.94
SRP54-207ENST00000555535 ESCO2Q56NI9 601 aa2.95□□□□□ -1.94
SRP54-207ENST00000555535 LCTLQ6UWM7 567 aa2.95□□□□□ -1.94
SRP54-207ENST00000555535 METTL7BQ6UX53 244 aa2.95□□□□□ -1.94
SRP54-207ENST00000555535 ODF3L1Q8IXM7 274 aa2.95□□□□□ -1.94
SRP54-207ENST00000555535 OR10V1Q8NGI7 309 aa2.95□□□□□ -1.94
SRP54-207ENST00000555535 GDPD5Q8WTR4 605 aa2.95□□□□□ -1.94
SRP54-207ENST00000555535 HSPH1Q92598 858 aa2.95□□□□□ -1.94
SRP54-207ENST00000555535 GOLGA1Q92805 767 aa2.95□□□□□ -1.94
SRP54-207ENST00000555535 RBM17Q96I25 401 aaKnown RBP2.95□□□□□ -1.94
SRP54-207ENST00000555535 CLSTN3Q9BQT9 956 aa2.95□□□□□ -1.94
SRP54-207ENST00000555535 NPLQ9BXD5 320 aaPredicted RBP2.95□□□□□ -1.94
SRP54-207ENST00000555535 KLHL1Q9NR64 748 aa2.95□□□□□ -1.94
SRP54-207ENST00000555535 C1RLQ9NZP8 487 aa2.95□□□□□ -1.94
SRP54-207ENST00000555535 CDC14AQ9UNH5 594 aa2.95□□□□□ -1.94
SRP54-207ENST00000555535 CNPY2Q9Y2B0 182 aa2.95□□□□□ -1.94
SRP54-207ENST00000555535 ZNF318Q5VUA4 2279 aa2.95□□□□□ -1.94
SRP54-207ENST00000555535 NDUFAF8A1L188 74 aa2.94□□□□□ -1.94
SRP54-207ENST00000555535 BLOC1S5-TXNDC5H3BN57 136 aa2.94□□□□□ -1.94
SRP54-207ENST00000555535 IPO5O00410 1097 aaKnown RBP2.94□□□□□ -1.94
SRP54-207ENST00000555535 IGLV1-44P01699 117 aa2.94□□□□□ -1.94
SRP54-207ENST00000555535 MYL1P05976 194 aa2.94□□□□□ -1.94
SRP54-207ENST00000555535 INHBAP08476 426 aa2.94□□□□□ -1.94
SRP54-207ENST00000555535 NR1D1P20393 614 aa2.94□□□□□ -1.94
SRP54-207ENST00000555535 CST5P28325 142 aaPredicted RBP2.94□□□□□ -1.94
SRP54-207ENST00000555535 HNRNPH1P31943 449 aaKnown RBP2.94□□□□□ -1.94
SRP54-207ENST00000555535 CUL4BQ13620 913 aa2.94□□□□□ -1.94
SRP54-207ENST00000555535 ATP13A5Q4VNC0 1218 aa2.94□□□□□ -1.94
SRP54-207ENST00000555535 SLC35E4Q6ICL7 350 aa2.94□□□□□ -1.94
SRP54-207ENST00000555535 CES5AQ6NT32 575 aa2.94□□□□□ -1.94
SRP54-207ENST00000555535 B3GNT6Q6ZMB0 384 aa2.94□□□□□ -1.94
SRP54-207ENST00000555535 CHD1LQ86WJ1 897 aa2.94□□□□□ -1.94
SRP54-207ENST00000555535 LURAP1LQ8IV03 231 aa2.94□□□□□ -1.94
SRP54-207ENST00000555535 ZNF440Q8IYI8 595 aa2.94□□□□□ -1.94
SRP54-207ENST00000555535 CACNA2D3Q8IZS8 1091 aa2.94□□□□□ -1.94
SRP54-207ENST00000555535 DNAAF1Q8NEP3 725 aa2.94□□□□□ -1.94
SRP54-207ENST00000555535 ALG14Q96F25 216 aa2.94□□□□□ -1.94
SRP54-207ENST00000555535 LINC00479Q96M42 142 aa2.94□□□□□ -1.94
SRP54-207ENST00000555535 PDZD7Q9H5P4 517 aa2.94□□□□□ -1.94
SRP54-207ENST00000555535 CHODLQ9H9P2 273 aa2.94□□□□□ -1.94
SRP54-207ENST00000555535 ENTPD7Q9NQZ7 604 aa2.94□□□□□ -1.94
SRP54-207ENST00000555535 PRR34Q9NV39 138 aa2.94□□□□□ -1.94
SRP54-207ENST00000555535 GRHPRQ9UBQ7 328 aa2.94□□□□□ -1.94
SRP54-207ENST00000555535 LRCH1Q9Y2L9 728 aa2.94□□□□□ -1.94
SRP54-207ENST00000555535 PDS5AQ29RF7 1337 aaKnown RBP2.93□□□□□ -1.94
SRP54-207ENST00000555535 ADAMTS9Q9P2N4 1935 aa2.93□□□□□ -1.94
SRP54-207ENST00000555535 PRRC2AP48634 2157 aaKnown RBP2.93□□□□□ -1.94
SRP54-207ENST00000555535 CBY3A6NI87 242 aa2.93□□□□□ -1.94
SRP54-207ENST00000555535 KLRF2D3W0D1 207 aa2.93□□□□□ -1.94
SRP54-207ENST00000555535 SRSF10O75494 262 aaKnown RBP2.93□□□□□ -1.94
SRP54-207ENST00000555535 RFPL2O75678 378 aa2.93□□□□□ -1.94
SRP54-207ENST00000555535 CDH1P12830 882 aa2.93□□□□□ -1.94
SRP54-207ENST00000555535 PAX1P15863 534 aa2.93□□□□□ -1.94
SRP54-207ENST00000555535 HDAC4P56524 1084 aa2.93□□□□□ -1.94
SRP54-207ENST00000555535 CBWD5Q5RIA9 395 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms