RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 UGT1A6P19224 532 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 UGT1A1P22309 533 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 UGT1A4P22310 534 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 PTPN3P26045 913 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 UGT1A3P35503 534 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 UGT1A5P35504 534 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 GJA8P48165 433 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 MAP3K7CLP57077 242 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 CTBSQ01459 385 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 ZNF33AQ06730 810 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 GALNT1Q10472 559 aaPredicted RBP10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 BNIP2Q12982 314 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 SEPT6Q14141 434 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 RAB39AQ14964 217 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 UGP2Q16851 508 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 ANKDD1AQ495B1 522 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 RAB41Q5JT25 222 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 C6orf10Q5SRN2 563 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 TMTC4Q5T4D3 741 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 SYPL2Q5VXT5 272 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 NANOGP8Q6NSW7 305 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 NDRG1Q92597 394 aaKnown RBP10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 PPWD1Q96BP3 646 aaKnown RBP10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 EFHD2Q96C19 240 aaPredicted RBP10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 HDAC11Q96DB2 347 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 CCDC126Q96EE4 140 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 FEM1CQ96JP0 617 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 SENP8Q96LD8 212 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 FCRL3Q96P31 734 aaPredicted RBP10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 DCUN1D5Q9BTE7 237 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 TRIM62Q9BVG3 475 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 ULBP1Q9BZM6 244 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 TSPYL2Q9H2G4 693 aaPredicted RBP10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 RHOJQ9H4E5 214 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 CASS4Q9NQ75 786 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 RNF19AQ9NV58 838 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 SMOXQ9NWM0 555 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 CDH9Q9ULB4 789 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 VANGL2Q9ULK5 521 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 CDC14AQ9UNH5 594 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 HEMK1Q9Y5R4 338 aaPredicted RBP10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 SYNJ2BP-COX16A0A087WUM0 186 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 PRORSD1PA6NEY8 169 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 KCNU1A8MYU2 1149 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 CFAP99D6REC4 459 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 K7EPI3 171 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 M0QZ92 97 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 SOCS2O14508 198 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 BEST1O76090 585 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 FUCA1P04066 466 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 SBK3P0C264 359 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 CD1EP15812 388 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 TCN1P20061 433 aaPredicted RBP10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 IL10P22301 178 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 PAX3P23760 479 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 HOXC8P31273 242 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 TMED10P49755 219 aaKnown RBP10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 NDUFV1P49821 464 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 CCR3P51677 355 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 NAGLUP54802 743 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 CDH15P55291 814 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 ATP6V0D1P61421 351 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 IRF9Q00978 393 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 PRPSAP1Q14558 356 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 ATP6AP1Q15904 470 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 MAP7D1Q3KQU3 841 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 AARS2Q5JTZ9 985 aaKnown RBP10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 FAM182AQ5T1J6 154 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 SPRYD7Q5W111 196 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 TMEM198Q66K66 360 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 ANKRD26P1Q6NSI1 321 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 LRRC8EQ6NSJ5 796 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 FAM117BQ6P1L5 589 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 SPRED1Q7Z699 444 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 PCYOX1LQ8NBM8 494 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 ARRDC4Q8NCT1 418 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 ZSCAN18Q8TBC5 510 aaPredicted RBP10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 GRIN3AQ8TCU5 1115 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 AGR3Q8TD06 166 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 GBA3Q9H227 469 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 ZNF408Q9H9D4 720 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 GPN2Q9H9Y4 310 aaPredicted RBP10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 MEAF6Q9HAF1 191 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 WDR6Q9NNW5 1121 aaKnown RBP10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 ANLNQ9NQW6 1124 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 CHST12Q9NRB3 414 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 RIC8BQ9NVN3 520 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 COX16Q9P0S2 106 aa10.75□□□□□ -0.69
MTHFD1-210ENST00000555252 PLOD2O00469 737 aa10.74□□□□□ -0.69
MTHFD1-210ENST00000555252 DLGAP1O14490 977 aa10.74□□□□□ -0.69
MTHFD1-210ENST00000555252 KPNA6O60684 536 aa10.74□□□□□ -0.69
MTHFD1-210ENST00000555252 ADAM23O75077 832 aa10.74□□□□□ -0.69
MTHFD1-210ENST00000555252 CNOT3O75175 753 aaKnown RBP10.74□□□□□ -0.69
MTHFD1-210ENST00000555252 RASAL1O95294 804 aa10.74□□□□□ -0.69
MTHFD1-210ENST00000555252 FYNP06241 537 aa10.74□□□□□ -0.69
MTHFD1-210ENST00000555252 ALOX5P09917 674 aa10.74□□□□□ -0.69
MTHFD1-210ENST00000555252 CCNA2P20248 432 aa10.74□□□□□ -0.69
MTHFD1-210ENST00000555252 FASP25445 335 aa10.74□□□□□ -0.69
MTHFD1-210ENST00000555252 PCSK1P29120 753 aa10.74□□□□□ -0.69
MTHFD1-210ENST00000555252 RPL9P32969 192 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms