RNA–Protein interactions for RNA: ENST00000554943.5

PPP4R3A-206, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5 BASIC

Gene PPP4R3A, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-206ENST00000554943 MTF2Q9Y483 593 aaPredicted RBP12.67□□□□□ -0.38
PPP4R3A-206ENST00000554943 TRIM64CA6NLI5 447 aa12.66□□□□□ -0.38
PPP4R3A-206ENST00000554943 RAG1P15918 1043 aa12.66□□□□□ -0.38
PPP4R3A-206ENST00000554943 HOXD9P28356 352 aaPredicted RBP12.66□□□□□ -0.38
PPP4R3A-206ENST00000554943 NOMO2Q5JPE7 1267 aa12.66□□□□□ -0.38
PPP4R3A-206ENST00000554943 LPCAT4Q643R3 524 aa12.66□□□□□ -0.38
PPP4R3A-206ENST00000554943 ZNF280DQ6N043 979 aa12.66□□□□□ -0.38
PPP4R3A-206ENST00000554943 C19orf43Q9BQ61 176 aa12.66□□□□□ -0.38
PPP4R3A-206ENST00000554943 CRISPLD1Q9H336 500 aa12.66□□□□□ -0.38
PPP4R3A-206ENST00000554943 FBXO44Q9H4M3 255 aa12.66□□□□□ -0.38
PPP4R3A-206ENST00000554943 CACNA2D2Q9NY47 1150 aa12.66□□□□□ -0.38
PPP4R3A-206ENST00000554943 PLK2Q9NYY3 685 aa12.66□□□□□ -0.38
PPP4R3A-206ENST00000554943 UBAP1Q9NZ09 502 aa12.66□□□□□ -0.38
PPP4R3A-206ENST00000554943 NCKIPSDQ9NZQ3 722 aa12.66□□□□□ -0.38
PPP4R3A-206ENST00000554943 MARCH4Q9P2E8 410 aaPredicted RBP12.66□□□□□ -0.38
PPP4R3A-206ENST00000554943 STOML2Q9UJZ1 356 aa12.66□□□□□ -0.38
PPP4R3A-206ENST00000554943 TMEM88BA6NKF7 163 aa12.66□□□□□ -0.38
PPP4R3A-206ENST00000554943 NEBLO76041 1014 aa12.66□□□□□ -0.38
PPP4R3A-206ENST00000554943 PAMP19021 973 aa12.66□□□□□ -0.38
PPP4R3A-206ENST00000554943 GPR15P49685 360 aa12.66□□□□□ -0.38
PPP4R3A-206ENST00000554943 YWHAHQ04917 246 aaPredicted RBP12.66□□□□□ -0.38
PPP4R3A-206ENST00000554943 ASPHQ12797 758 aa12.66□□□□□ -0.38
PPP4R3A-206ENST00000554943 MTA1Q13330 715 aa12.66□□□□□ -0.38
PPP4R3A-206ENST00000554943 TLR1Q15399 786 aa12.66□□□□□ -0.38
PPP4R3A-206ENST00000554943 SPATS1Q496A3 300 aa12.66□□□□□ -0.38
PPP4R3A-206ENST00000554943 ZNF470Q6ECI4 717 aa12.66□□□□□ -0.38
PPP4R3A-206ENST00000554943 FBXL22Q6P050 247 aa12.66□□□□□ -0.38
PPP4R3A-206ENST00000554943 GALNT15Q8N3T1 639 aa12.66□□□□□ -0.38
PPP4R3A-206ENST00000554943 IPMKQ8NFU5 416 aa12.66□□□□□ -0.38
PPP4R3A-206ENST00000554943 CALML6Q8TD86 181 aa12.66□□□□□ -0.38
PPP4R3A-206ENST00000554943 CFHR5Q9BXR6 569 aa12.66□□□□□ -0.38
PPP4R3A-206ENST00000554943 NUF2Q9BZD4 464 aa12.66□□□□□ -0.38
PPP4R3A-206ENST00000554943 ARHGAP39Q9C0H5 1083 aa12.66□□□□□ -0.38
PPP4R3A-206ENST00000554943 ZNF696Q9H7X3 374 aa12.66□□□□□ -0.38
PPP4R3A-206ENST00000554943 ZNF408Q9H9D4 720 aa12.66□□□□□ -0.38
PPP4R3A-206ENST00000554943 TMEM45AQ9NWC5 275 aa12.66□□□□□ -0.38
PPP4R3A-206ENST00000554943 TLK1Q9UKI8 766 aa12.66□□□□□ -0.38
PPP4R3A-206ENST00000554943 SCN5AQ14524 2016 aa12.66□□□□□ -0.38
PPP4R3A-206ENST00000554943 PDHA1P08559 390 aa12.66□□□□□ -0.38
PPP4R3A-206ENST00000554943 PBX3P40426 434 aa12.66□□□□□ -0.38
PPP4R3A-206ENST00000554943 CUL3Q13618 768 aa12.66□□□□□ -0.38
PPP4R3A-206ENST00000554943 SQLEQ14534 574 aa12.66□□□□□ -0.38
PPP4R3A-206ENST00000554943 COQ5Q5HYK3 327 aa12.66□□□□□ -0.38
PPP4R3A-206ENST00000554943 RASIP1Q5U651 963 aa12.66□□□□□ -0.38
PPP4R3A-206ENST00000554943 RNF220Q5VTB9 566 aa12.66□□□□□ -0.38
PPP4R3A-206ENST00000554943 ADCY4Q8NFM4 1077 aa12.66□□□□□ -0.38
PPP4R3A-206ENST00000554943 RCN3Q96D15 328 aa12.66□□□□□ -0.38
PPP4R3A-206ENST00000554943 POMKQ9H5K3 350 aa12.66□□□□□ -0.38
PPP4R3A-206ENST00000554943 ALDOCP09972 364 aaKnown RBP12.65□□□□□ -0.38
PPP4R3A-206ENST00000554943 CKBP12277 381 aa12.65□□□□□ -0.38
PPP4R3A-206ENST00000554943 HOXB8P17481 243 aaPredicted RBP12.65□□□□□ -0.38
PPP4R3A-206ENST00000554943 OGNP20774 298 aaKnown RBP12.65□□□□□ -0.38
PPP4R3A-206ENST00000554943 CCDC6Q16204 474 aa12.65□□□□□ -0.38
PPP4R3A-206ENST00000554943 C6orf163Q5TEZ5 329 aa12.65□□□□□ -0.38
PPP4R3A-206ENST00000554943 RSPO2Q6UXX9 243 aaPredicted RBP12.65□□□□□ -0.38
PPP4R3A-206ENST00000554943 PPFIBP2Q8ND30 876 aa12.65□□□□□ -0.38
PPP4R3A-206ENST00000554943 USP33Q8TEY7 942 aa12.65□□□□□ -0.38
PPP4R3A-206ENST00000554943 CWH43Q9H720 699 aa12.65□□□□□ -0.38
PPP4R3A-206ENST00000554943 SP110Q9HB58 689 aa12.65□□□□□ -0.38
PPP4R3A-206ENST00000554943 DLGAP2Q9P1A6 1054 aa12.65□□□□□ -0.38
PPP4R3A-206ENST00000554943 PADI4Q9UM07 663 aa12.65□□□□□ -0.38
PPP4R3A-206ENST00000554943 MATN4O95460 622 aa12.65□□□□□ -0.38
PPP4R3A-206ENST00000554943 TSPAN12O95859 305 aa12.65□□□□□ -0.38
PPP4R3A-206ENST00000554943 AVPR1AP37288 418 aa12.65□□□□□ -0.38
PPP4R3A-206ENST00000554943 YBEYP58557 167 aaPredicted RBP12.65□□□□□ -0.38
PPP4R3A-206ENST00000554943 HERVK_113P63132 956 aa12.65□□□□□ -0.38
PPP4R3A-206ENST00000554943 TSPY1Q01534 308 aa12.65□□□□□ -0.38
PPP4R3A-206ENST00000554943 RNF165Q6ZSG1 346 aa12.65□□□□□ -0.38
PPP4R3A-206ENST00000554943 SPATA2LQ8IUW3 424 aaPredicted RBP12.65□□□□□ -0.38
PPP4R3A-206ENST00000554943 SLC22A9Q8IVM8 553 aa12.65□□□□□ -0.38
PPP4R3A-206ENST00000554943 GOLM1Q8NBJ4 401 aa12.65□□□□□ -0.38
PPP4R3A-206ENST00000554943 CEP70Q8NHQ1 597 aa12.65□□□□□ -0.38
PPP4R3A-206ENST00000554943 GRIN3AQ8TCU5 1115 aa12.65□□□□□ -0.38
PPP4R3A-206ENST00000554943 SREK1Q8WXA9 508 aaKnown RBP12.65□□□□□ -0.38
PPP4R3A-206ENST00000554943 ZNF597Q96LX8 424 aa12.65□□□□□ -0.38
PPP4R3A-206ENST00000554943 ERVK-6Q9BXR3 956 aa12.65□□□□□ -0.38
PPP4R3A-206ENST00000554943 PIDD1Q9HB75 910 aa12.65□□□□□ -0.38
PPP4R3A-206ENST00000554943 NEUROG3Q9Y4Z2 214 aa12.65□□□□□ -0.38
PPP4R3A-206ENST00000554943 CA12O43570 354 aa12.64□□□□□ -0.39
PPP4R3A-206ENST00000554943 PRLP01236 227 aa12.64□□□□□ -0.39
PPP4R3A-206ENST00000554943 RBP1P09455 135 aa12.64□□□□□ -0.39
PPP4R3A-206ENST00000554943 ADARP55265 1226 aaKnown RBP12.64□□□□□ -0.39
PPP4R3A-206ENST00000554943 TCHHL1Q5QJ38 904 aaPredicted RBP12.64□□□□□ -0.39
PPP4R3A-206ENST00000554943 ISLR2Q6UXK2 745 aa12.64□□□□□ -0.39
PPP4R3A-206ENST00000554943 BNC2Q6ZN30 1099 aaPredicted RBP12.64□□□□□ -0.39
PPP4R3A-206ENST00000554943 CUZD1Q86UP6 607 aa12.64□□□□□ -0.39
PPP4R3A-206ENST00000554943 CASD1Q96PB1 797 aa12.64□□□□□ -0.39
PPP4R3A-206ENST00000554943 PPP1R12CQ9BZL4 782 aa12.64□□□□□ -0.39
PPP4R3A-206ENST00000554943 UNC93B1Q9H1C4 597 aa12.64□□□□□ -0.39
PPP4R3A-206ENST00000554943 IKZF3Q9UKT9 509 aa12.64□□□□□ -0.39
PPP4R3A-206ENST00000554943 VWA7Q9Y334 891 aa12.64□□□□□ -0.39
PPP4R3A-206ENST00000554943 NCF2P19878 526 aaPredicted RBP12.64□□□□□ -0.39
PPP4R3A-206ENST00000554943 CCND3P30281 292 aaPredicted RBP12.64□□□□□ -0.39
PPP4R3A-206ENST00000554943 THPOP40225 353 aa12.64□□□□□ -0.39
PPP4R3A-206ENST00000554943 ALDH1A3P47895 512 aa12.64□□□□□ -0.39
PPP4R3A-206ENST00000554943 DSC2Q02487 901 aa12.64□□□□□ -0.39
PPP4R3A-206ENST00000554943 SLC39A12Q504Y0 691 aa12.64□□□□□ -0.39
PPP4R3A-206ENST00000554943 XKR7Q5GH72 579 aa12.64□□□□□ -0.39
PPP4R3A-206ENST00000554943 KLHDC10Q6PID8 442 aa12.64□□□□□ -0.39
PPP4R3A-206ENST00000554943 SLC24A5Q71RS6 500 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms