RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 TKTP29401 623 aaKnown RBP2.75□□□□□ -1.97
PRPF39-206ENST00000554429 GCH1P30793 250 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 CCT6AP40227 531 aaKnown RBP2.75□□□□□ -1.97
PRPF39-206ENST00000554429 NNMTP40261 264 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 PTGIRP43119 386 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 ALDH9A1P49189 494 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 OXCT1P55809 520 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 PTENP60484 403 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 SSTP61278 116 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 ABATP80404 500 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 NIPAL4Q0D2K0 466 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 ELAVL2Q12926 359 aaKnown RBP2.75□□□□□ -1.97
PRPF39-206ENST00000554429 ORC2Q13416 577 aaPredicted RBP2.75□□□□□ -1.97
PRPF39-206ENST00000554429 MSLNQ13421 630 aaPredicted RBP2.75□□□□□ -1.97
PRPF39-206ENST00000554429 USP10Q14694 798 aaKnown RBP2.75□□□□□ -1.97
PRPF39-206ENST00000554429 PTPAQ15257 358 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 EPHA7Q15375 998 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 NAB2Q15742 525 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 MLF2Q15773 248 aaPredicted RBP2.75□□□□□ -1.97
PRPF39-206ENST00000554429 SGCAQ16586 387 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 UGCGQ16739 394 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 SMTNL2Q2TAL5 461 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 PCGF3Q3KNV8 242 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 BEND6Q5SZJ8 279 aaPredicted RBP2.75□□□□□ -1.97
PRPF39-206ENST00000554429 ANKRD40Q6AI12 368 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 LAIR1Q6GTX8 287 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 VHLLQ6RSH7 139 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 NLRP9Q7RTR0 991 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 COMTD1Q86VU5 262 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 TMEM173Q86WV6 379 aaPredicted RBP2.75□□□□□ -1.97
PRPF39-206ENST00000554429 CEP57Q86XR8 500 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 SYCE1Q8N0S2 351 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 ARL14Q8N4G2 192 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 ANKFN1Q8N957 763 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 IGSF22Q8N9C0 903 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 LEMD2Q8NC56 503 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 OR2W6PQ8NHA6 318 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 OR14C36Q8NHC7 312 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 NETO1Q8TDF5 533 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 GATAD2BQ8WXI9 593 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 RFFLQ8WZ73 363 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 IRGQQ8WZA9 623 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 C7orf26Q96N11 449 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 SPATA13Q96N96 652 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 HNRNPABQ99729 332 aaKnown RBP2.75□□□□□ -1.97
PRPF39-206ENST00000554429 SPXQ9BT56 116 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 CARD6Q9BX69 1037 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 GON7Q9BXV9 100 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 KLHL4Q9C0H6 718 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 MFSD1Q9H3U5 465 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 POLD4Q9HCU8 107 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 KLK14Q9P0G3 267 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 HSFX1Q9UBD0 423 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 UBA2Q9UBT2 640 aaPredicted RBP2.75□□□□□ -1.97
PRPF39-206ENST00000554429 SERTAD1Q9UHV2 236 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 CNOT6Q9ULM6 557 aaKnown RBP2.75□□□□□ -1.97
PRPF39-206ENST00000554429 PCDHA4Q9UN74 947 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 CLCA2Q9UQC9 943 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 PCDHB11Q9Y5F2 797 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 PCDHGA5Q9Y5G8 931 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 MYO7AQ13402 2215 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 ANK1P16157 1881 aa2.75□□□□□ -1.97
PRPF39-206ENST00000554429 TRBV23OR9-2A0A075B6M9 112 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 TRAV34A0A0B4J273 112 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 A0A1W2PQU0 124 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 MED19A0JLT2 244 aaPredicted RBP2.74□□□□□ -1.97
PRPF39-206ENST00000554429 SH3D21A4FU49 640 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 OR5K4A6NMS3 321 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 AGAP14A8MT82 685 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 SHISA8B8ZZ34 492 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 E7ENQ6 273 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 E9PBE3 544 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 FAM227AF5H4B4 570 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 MAN2B1O00754 1011 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 SOCS6O14544 535 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 SMAD9O15198 467 aaKnown RBP2.74□□□□□ -1.97
PRPF39-206ENST00000554429 RAD51BO15315 384 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 TRAPPC3O43617 180 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 PIGNO95427 931 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 IVLP07476 585 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 ADRB1P08588 477 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 FGFR3P22607 806 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 ABCD3P28288 659 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 ALDH3A1P30838 453 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 EIF2DP41214 584 aaKnown RBP2.74□□□□□ -1.97
PRPF39-206ENST00000554429 BUD31P41223 144 aaPredicted RBP2.74□□□□□ -1.97
PRPF39-206ENST00000554429 MAGEA4P43358 317 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 HSPA7P48741 367 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 METAP2P50579 478 aaKnown RBP eCLIP2.74□□□□□ -1.97
PRPF39-206ENST00000554429 PMP22Q01453 160 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 SP4Q02446 784 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 MBTD1Q05BQ5 628 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 CHIT1Q13231 466 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 XRCC4Q13426 336 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 PWP1Q13610 501 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 LRRC32Q14392 662 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 GRM2Q14416 872 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 MPEG1Q2M385 716 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 USP41Q3LFD5 358 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 ZACNQ401N2 412 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms