RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 DECR2Q9NUI1 292 aa5.33□□□□□ -1.56
CHD8-207ENST00000554384 HCFC1R1Q9NWW0 138 aa5.33□□□□□ -1.56
CHD8-207ENST00000554384 ZNF215Q9UL58 517 aaPredicted RBP5.33□□□□□ -1.56
CHD8-207ENST00000554384 HS3ST3B1Q9Y662 390 aa5.33□□□□□ -1.56
CHD8-207ENST00000554384 FAM237AA0A1B0GTK4 181 aa5.32□□□□□ -1.56
CHD8-207ENST00000554384 FRMD3A2A2Y4 597 aa5.32□□□□□ -1.56
CHD8-207ENST00000554384 DNAJC9-AS1A6NH13 148 aa5.32□□□□□ -1.56
CHD8-207ENST00000554384 BECN2A8MW95 431 aa5.32□□□□□ -1.56
CHD8-207ENST00000554384 USP17L23D6RBM5 183 aa5.32□□□□□ -1.56
CHD8-207ENST00000554384 CHL1O00533 1208 aa5.32□□□□□ -1.56
CHD8-207ENST00000554384 KIF1CO43896 1103 aaKnown RBP5.32□□□□□ -1.56
CHD8-207ENST00000554384 PPFIA2O75334 1257 aa5.32□□□□□ -1.56
CHD8-207ENST00000554384 FGBP02675 491 aa5.32□□□□□ -1.56
CHD8-207ENST00000554384 IRF1P10914 325 aa5.32□□□□□ -1.56
CHD8-207ENST00000554384 KRT10P13645 584 aa5.32□□□□□ -1.56
CHD8-207ENST00000554384 CDAP32320 146 aa5.32□□□□□ -1.56
CHD8-207ENST00000554384 ME1P48163 572 aa5.32□□□□□ -1.56
CHD8-207ENST00000554384 PPATQ06203 517 aa5.32□□□□□ -1.56
CHD8-207ENST00000554384 PRKG2Q13237 762 aa5.32□□□□□ -1.56
CHD8-207ENST00000554384 MYBPC2Q14324 1141 aa5.32□□□□□ -1.56
CHD8-207ENST00000554384 ZNF284Q2VY69 593 aa5.32□□□□□ -1.56
CHD8-207ENST00000554384 DPCR1Q3MIW9 517 aa5.32□□□□□ -1.56
CHD8-207ENST00000554384 GKAP1Q5VSY0 366 aaPredicted RBP5.32□□□□□ -1.56
CHD8-207ENST00000554384 DPY19L2P1Q6NXN4 242 aa5.32□□□□□ -1.56
CHD8-207ENST00000554384 Q6ZSV7 163 aa5.32□□□□□ -1.56
CHD8-207ENST00000554384 ZNF367Q7RTV3 350 aa5.32□□□□□ -1.56
CHD8-207ENST00000554384 MB21D2Q8IYB1 491 aaPredicted RBP5.32□□□□□ -1.56
CHD8-207ENST00000554384 ARFGAP1Q8N6T3 406 aa5.32□□□□□ -1.56
CHD8-207ENST00000554384 ARHGEF2Q92974 986 aaKnown RBP5.32□□□□□ -1.56
CHD8-207ENST00000554384 TIGD1Q96MW7 591 aa5.32□□□□□ -1.56
CHD8-207ENST00000554384 CMTM3Q96MX0 182 aa5.32□□□□□ -1.56
CHD8-207ENST00000554384 STRA6Q9BX79 667 aa5.32□□□□□ -1.56
CHD8-207ENST00000554384 BPIFA1Q9NP55 256 aa5.32□□□□□ -1.56
CHD8-207ENST00000554384 ANKRD10Q9NXR5 420 aa5.32□□□□□ -1.56
CHD8-207ENST00000554384 EHD2Q9NZN4 543 aa5.32□□□□□ -1.56
CHD8-207ENST00000554384 VPS28Q9UK41 221 aa5.32□□□□□ -1.56
CHD8-207ENST00000554384 PPRC1Q5VV67 1664 aaKnown RBP5.31□□□□□ -1.56
CHD8-207ENST00000554384 SHROOM2Q13796 1616 aa5.31□□□□□ -1.56
CHD8-207ENST00000554384 FAM90A8PA6NJQ4 464 aa5.31□□□□□ -1.56
CHD8-207ENST00000554384 AGAP14A8MT82 685 aa5.31□□□□□ -1.56
CHD8-207ENST00000554384 GTPBP1O00178 669 aaKnown RBP5.31□□□□□ -1.56
CHD8-207ENST00000554384 TAF4O00268 1085 aa5.31□□□□□ -1.56
CHD8-207ENST00000554384 VILLO15195 856 aa5.31□□□□□ -1.56
CHD8-207ENST00000554384 MMP3P08254 477 aa5.31□□□□□ -1.56
CHD8-207ENST00000554384 FAM90A13PP0C7W8 464 aa5.31□□□□□ -1.56
CHD8-207ENST00000554384 FAM90A24PP0C7X0 464 aa5.31□□□□□ -1.56
CHD8-207ENST00000554384 PCNAP12004 261 aa5.31□□□□□ -1.56
CHD8-207ENST00000554384 AGAP20933 346 aa5.31□□□□□ -1.56
CHD8-207ENST00000554384 COMPP49747 757 aaPredicted RBP5.31□□□□□ -1.56
CHD8-207ENST00000554384 CLCN3P51790 818 aa5.31□□□□□ -1.56
CHD8-207ENST00000554384 NLRP5P59047 1200 aa5.31□□□□□ -1.56
CHD8-207ENST00000554384 SORDQ00796 357 aa5.31□□□□□ -1.56
CHD8-207ENST00000554384 CREB5Q02930 508 aa5.31□□□□□ -1.56
CHD8-207ENST00000554384 ITGADQ13349 1161 aa5.31□□□□□ -1.56
CHD8-207ENST00000554384 PRTGQ2VWP7 1150 aa5.31□□□□□ -1.56
CHD8-207ENST00000554384 PARM1Q6UWI2 310 aa5.31□□□□□ -1.56
CHD8-207ENST00000554384 NME8Q8N427 588 aa5.31□□□□□ -1.56
CHD8-207ENST00000554384 ZBTB2Q8N680 514 aa5.31□□□□□ -1.56
CHD8-207ENST00000554384 TEX45Q8NA69 505 aa5.31□□□□□ -1.56
CHD8-207ENST00000554384 HUS1BQ8NHY5 278 aa5.31□□□□□ -1.56
CHD8-207ENST00000554384 GABPB2Q8TAK5 448 aaPredicted RBP5.31□□□□□ -1.56
CHD8-207ENST00000554384 ARRDC2Q8TBH0 407 aa5.31□□□□□ -1.56
CHD8-207ENST00000554384 DENND1AQ8TEH3 1009 aa5.31□□□□□ -1.56
CHD8-207ENST00000554384 SLC35F5Q8WV83 523 aa5.31□□□□□ -1.56
CHD8-207ENST00000554384 SNAPC3Q92966 411 aa5.31□□□□□ -1.56
CHD8-207ENST00000554384 URB1-AS1Q96HZ7 61 aa5.31□□□□□ -1.56
CHD8-207ENST00000554384 RSRC1Q96IZ7 334 aaKnown RBP5.31□□□□□ -1.56
CHD8-207ENST00000554384 GFM1Q96RP9 751 aaKnown RBP5.31□□□□□ -1.56
CHD8-207ENST00000554384 MAP7D2Q96T17 732 aa5.31□□□□□ -1.56
CHD8-207ENST00000554384 TASP1Q9H6P5 420 aa5.31□□□□□ -1.56
CHD8-207ENST00000554384 FZD3Q9NPG1 666 aa5.31□□□□□ -1.56
CHD8-207ENST00000554384 ASAH2Q9NR71 780 aa5.31□□□□□ -1.56
CHD8-207ENST00000554384 SMYD2Q9NRG4 433 aa5.31□□□□□ -1.56
CHD8-207ENST00000554384 CYSLTR2Q9NS75 346 aa5.31□□□□□ -1.56
CHD8-207ENST00000554384 ELOVL5Q9NYP7 299 aa5.31□□□□□ -1.56
CHD8-207ENST00000554384 PCDHGB4Q9UN71 923 aa5.31□□□□□ -1.56
CHD8-207ENST00000554384 AAR2Q9Y312 384 aaKnown RBP5.31□□□□□ -1.56
CHD8-207ENST00000554384 RAI2Q9Y5P3 530 aa5.31□□□□□ -1.56
CHD8-207ENST00000554384 LYVE1Q9Y5Y7 322 aa5.31□□□□□ -1.56
CHD8-207ENST00000554384 CEPT1Q9Y6K0 416 aa5.31□□□□□ -1.56
CHD8-207ENST00000554384 TOP2AP11388 1531 aaKnown RBP5.31□□□□□ -1.56
CHD8-207ENST00000554384 KAT6BQ8WYB5 2073 aa5.31□□□□□ -1.56
CHD8-207ENST00000554384 CCDC88BA6NC98 1476 aa5.31□□□□□ -1.56
CHD8-207ENST00000554384 COL3A1P02461 1466 aaPredicted RBP5.31□□□□□ -1.56
CHD8-207ENST00000554384 LY6G6EA0A0G2JKS1 128 aa5.3□□□□□ -1.56
CHD8-207ENST00000554384 IGLV5-39A0A0G2JS06 123 aa5.3□□□□□ -1.56
CHD8-207ENST00000554384 MYO1GB0I1T2 1018 aa5.3□□□□□ -1.56
CHD8-207ENST00000554384 J3KR12 359 aa5.3□□□□□ -1.56
CHD8-207ENST00000554384 KLKB1P03952 638 aa5.3□□□□□ -1.56
CHD8-207ENST00000554384 MYZAPP0CAP1 466 aa5.3□□□□□ -1.56
CHD8-207ENST00000554384 UBA7P41226 1012 aa5.3□□□□□ -1.56
CHD8-207ENST00000554384 ALDH7A1P49419 539 aaKnown RBP5.3□□□□□ -1.56
CHD8-207ENST00000554384 MC1RQ01726 317 aa5.3□□□□□ -1.56
CHD8-207ENST00000554384 SRSF1Q07955 248 aaKnown RBP eCLIP5.3□□□□□ -1.56
CHD8-207ENST00000554384 CSTF3Q12996 717 aaKnown RBP5.3□□□□□ -1.56
CHD8-207ENST00000554384 PDE1CQ14123 709 aaPredicted RBP5.3□□□□□ -1.56
CHD8-207ENST00000554384 GPR18Q14330 331 aa5.3□□□□□ -1.56
CHD8-207ENST00000554384 IRF3Q14653 427 aa5.3□□□□□ -1.56
CHD8-207ENST00000554384 DRAP1Q14919 205 aaPredicted RBP5.3□□□□□ -1.56
CHD8-207ENST00000554384 MMEL1Q495T6 779 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms