RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 USP9YO00507 2555 aaPredicted RBP7.83□□□□□ -1.16
ABCD4-220ENST00000553998 TDRD6O60522 2096 aaKnown RBP7.83□□□□□ -1.16
ABCD4-220ENST00000553998 NOTCH2Q04721 2471 aa7.83□□□□□ -1.16
ABCD4-220ENST00000553998 IGLV3-10A0A075B6K4 115 aa7.82□□□□□ -1.16
ABCD4-220ENST00000553998 RCCD1A6NED2 376 aa7.82□□□□□ -1.16
ABCD4-220ENST00000553998 DRGXA6NNA5 263 aa7.82□□□□□ -1.16
ABCD4-220ENST00000553998 I6L893 689 aaPredicted RBP7.82□□□□□ -1.16
ABCD4-220ENST00000553998 KPNA3O00505 521 aaPredicted RBP7.82□□□□□ -1.16
ABCD4-220ENST00000553998 FPGTO14772 594 aa7.82□□□□□ -1.16
ABCD4-220ENST00000553998 KRT86O43790 486 aa7.82□□□□□ -1.16
ABCD4-220ENST00000553998 ZNF821O75541 412 aaPredicted RBP7.82□□□□□ -1.16
ABCD4-220ENST00000553998 GCATO75600 419 aa7.82□□□□□ -1.16
ABCD4-220ENST00000553998 PCDH8O95206 1070 aa7.82□□□□□ -1.16
ABCD4-220ENST00000553998 KRT7P08729 469 aa7.82□□□□□ -1.16
ABCD4-220ENST00000553998 L1CAMP32004 1257 aa7.82□□□□□ -1.16
ABCD4-220ENST00000553998 CLCN6P51797 869 aa7.82□□□□□ -1.16
ABCD4-220ENST00000553998 AUHQ13825 339 aaKnown RBP7.82□□□□□ -1.16
ABCD4-220ENST00000553998 SPIDRQ14159 915 aa7.82□□□□□ -1.16
ABCD4-220ENST00000553998 MESDQ14696 234 aa7.82□□□□□ -1.16
ABCD4-220ENST00000553998 DEFB133Q30KQ1 61 aa7.82□□□□□ -1.16
ABCD4-220ENST00000553998 ERMARDQ5T6L9 678 aa7.82□□□□□ -1.16
ABCD4-220ENST00000553998 MANEALQ5VSG8 457 aa7.82□□□□□ -1.16
ABCD4-220ENST00000553998 FOXR1Q6PIV2 292 aa7.82□□□□□ -1.16
ABCD4-220ENST00000553998 LVRNQ6Q4G3 990 aa7.82□□□□□ -1.16
ABCD4-220ENST00000553998 RAB11FIP2Q7L804 512 aa7.82□□□□□ -1.16
ABCD4-220ENST00000553998 POLNQ7Z5Q5 900 aa7.82□□□□□ -1.16
ABCD4-220ENST00000553998 PTAR1Q7Z6K3 402 aaPredicted RBP7.82□□□□□ -1.16
ABCD4-220ENST00000553998 CIR1Q86X95 450 aaPredicted RBP7.82□□□□□ -1.16
ABCD4-220ENST00000553998 ZNF683Q8IZ20 524 aa7.82□□□□□ -1.16
ABCD4-220ENST00000553998 FBXO39Q8N4B4 442 aa7.82□□□□□ -1.16
ABCD4-220ENST00000553998 CCDC185Q8N715 623 aa7.82□□□□□ -1.16
ABCD4-220ENST00000553998 DENND6BQ8NEG7 585 aa7.82□□□□□ -1.16
ABCD4-220ENST00000553998 LMX1AQ8TE12 382 aa7.82□□□□□ -1.16
ABCD4-220ENST00000553998 BTBD6Q96KE9 485 aa7.82□□□□□ -1.16
ABCD4-220ENST00000553998 CCDC114Q96M63 670 aa7.82□□□□□ -1.16
ABCD4-220ENST00000553998 PSMB7Q99436 277 aa7.82□□□□□ -1.16
ABCD4-220ENST00000553998 ADNPQ9H2P0 1102 aa7.82□□□□□ -1.16
ABCD4-220ENST00000553998 ANLNQ9NQW6 1124 aa7.82□□□□□ -1.16
ABCD4-220ENST00000553998 DYRK4Q9NR20 520 aa7.82□□□□□ -1.16
ABCD4-220ENST00000553998 DONSONQ9NYP3 566 aa7.82□□□□□ -1.16
ABCD4-220ENST00000553998 PNMA8BQ9ULN7 279 aaPredicted RBP7.82□□□□□ -1.16
ABCD4-220ENST00000553998 PADI4Q9UM07 663 aa7.82□□□□□ -1.16
ABCD4-220ENST00000553998 PCDHGA4Q9Y5G9 962 aa7.82□□□□□ -1.16
ABCD4-220ENST00000553998 WASF2Q9Y6W5 498 aa7.82□□□□□ -1.16
ABCD4-220ENST00000553998 MYO9AB2RTY4 2548 aa7.82□□□□□ -1.16
ABCD4-220ENST00000553998 CXorf51AA0A1B0GTR3 108 aa7.81□□□□□ -1.16
ABCD4-220ENST00000553998 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.81□□□□□ -1.16
ABCD4-220ENST00000553998 TOR1BO14657 336 aa7.81□□□□□ -1.16
ABCD4-220ENST00000553998 MUSKO15146 869 aa7.81□□□□□ -1.16
ABCD4-220ENST00000553998 YY2O15391 372 aa7.81□□□□□ -1.16
ABCD4-220ENST00000553998 ZSCAN12O43309 604 aa7.81□□□□□ -1.16
ABCD4-220ENST00000553998 SMAD6O43541 496 aaKnown RBP7.81□□□□□ -1.16
ABCD4-220ENST00000553998 BUB1BO60566 1050 aaPredicted RBP7.81□□□□□ -1.16
ABCD4-220ENST00000553998 LRIG2O94898 1065 aa7.81□□□□□ -1.16
ABCD4-220ENST00000553998 ADRB3P13945 408 aa7.81□□□□□ -1.16
ABCD4-220ENST00000553998 WT1P19544 449 aaPredicted RBP7.81□□□□□ -1.16
ABCD4-220ENST00000553998 ITGB7P26010 798 aa7.81□□□□□ -1.16
ABCD4-220ENST00000553998 IL1R2P27930 398 aa7.81□□□□□ -1.16
ABCD4-220ENST00000553998 HCAR3P49019 387 aa7.81□□□□□ -1.16
ABCD4-220ENST00000553998 NEK3P51956 506 aa7.81□□□□□ -1.16
ABCD4-220ENST00000553998 NAP1L1P55209 391 aaKnown RBP7.81□□□□□ -1.16
ABCD4-220ENST00000553998 CDH4P55283 916 aa7.81□□□□□ -1.16
ABCD4-220ENST00000553998 YPEL5P62699 121 aa7.81□□□□□ -1.16
ABCD4-220ENST00000553998 FOXK1P85037 733 aa7.81□□□□□ -1.16
ABCD4-220ENST00000553998 SLC25A11Q02978 314 aaKnown RBP7.81□□□□□ -1.16
ABCD4-220ENST00000553998 ZFP36L1Q07352 338 aaKnown RBP7.81□□□□□ -1.16
ABCD4-220ENST00000553998 SRSF6Q13247 344 aaKnown RBP7.81□□□□□ -1.16
ABCD4-220ENST00000553998 PDE1CQ14123 709 aaPredicted RBP7.81□□□□□ -1.16
ABCD4-220ENST00000553998 CLCA4Q14CN2 919 aa7.81□□□□□ -1.16
ABCD4-220ENST00000553998 DPYSL2Q16555 572 aa7.81□□□□□ -1.16
ABCD4-220ENST00000553998 RAB6CQ53S08 254 aa7.81□□□□□ -1.16
ABCD4-220ENST00000553998 ARSIQ5FYB1 569 aa7.81□□□□□ -1.16
ABCD4-220ENST00000553998 CRTC1Q6UUV9 634 aa7.81□□□□□ -1.16
ABCD4-220ENST00000553998 CYP4V2Q6ZWL3 525 aaPredicted RBP7.81□□□□□ -1.16
ABCD4-220ENST00000553998 B3GNT8Q7Z7M8 397 aa7.81□□□□□ -1.16
ABCD4-220ENST00000553998 PLPP6Q8IY26 295 aa7.81□□□□□ -1.16
ABCD4-220ENST00000553998 SYCE1Q8N0S2 351 aa7.81□□□□□ -1.16
ABCD4-220ENST00000553998 SDR16C5Q8N3Y7 309 aa7.81□□□□□ -1.16
ABCD4-220ENST00000553998 ATP11CQ8NB49 1132 aa7.81□□□□□ -1.16
ABCD4-220ENST00000553998 CHST14Q8NCH0 376 aa7.81□□□□□ -1.16
ABCD4-220ENST00000553998 HTR3CQ8WXA8 447 aa7.81□□□□□ -1.16
ABCD4-220ENST00000553998 TMEM159Q96B96 161 aa7.81□□□□□ -1.16
ABCD4-220ENST00000553998 CENPTQ96BT3 561 aa7.81□□□□□ -1.16
ABCD4-220ENST00000553998 TBC1D31Q96DN5 1066 aa7.81□□□□□ -1.16
ABCD4-220ENST00000553998 PPP1R16AQ96I34 528 aa7.81□□□□□ -1.16
ABCD4-220ENST00000553998 RPRD1AQ96P16 312 aaPredicted RBP7.81□□□□□ -1.16
ABCD4-220ENST00000553998 PEBP4Q96S96 227 aa7.81□□□□□ -1.16
ABCD4-220ENST00000553998 EPAS1Q99814 870 aa7.81□□□□□ -1.16
ABCD4-220ENST00000553998 SNRNP25Q9BV90 132 aaKnown RBP7.81□□□□□ -1.16
ABCD4-220ENST00000553998 C2orf49Q9BVC5 232 aaPredicted RBP7.81□□□□□ -1.16
ABCD4-220ENST00000553998 STRADBQ9C0K7 418 aa7.81□□□□□ -1.16
ABCD4-220ENST00000553998 CLPBQ9H078 707 aa7.81□□□□□ -1.16
ABCD4-220ENST00000553998 SIK2Q9H0K1 926 aa7.81□□□□□ -1.16
ABCD4-220ENST00000553998 RAB6CQ9H0N0 254 aa7.81□□□□□ -1.16
ABCD4-220ENST00000553998 TCEAL2Q9H3H9 227 aaPredicted RBP7.81□□□□□ -1.16
ABCD4-220ENST00000553998 KCNF1Q9H3M0 494 aa7.81□□□□□ -1.16
ABCD4-220ENST00000553998 SEPT10Q9P0V9 454 aa7.81□□□□□ -1.16
ABCD4-220ENST00000553998 RCOR3Q9P2K3 495 aaPredicted RBP7.81□□□□□ -1.16
ABCD4-220ENST00000553998 OR12D3Q9UGF7 316 aa7.81□□□□□ -1.16
ABCD4-220ENST00000553998 IL36AQ9UHA7 158 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms