RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 SMYD5Q6GMV2 418 aa12.03□□□□□ -0.48
TRAFD1-205ENST00000548277 DNAAF5Q86Y56 855 aa12.03□□□□□ -0.48
TRAFD1-205ENST00000548277 GPR156Q8NFN8 814 aa12.03□□□□□ -0.48
TRAFD1-205ENST00000548277 CENPIQ92674 756 aaPredicted RBP12.03□□□□□ -0.48
TRAFD1-205ENST00000548277 FUBP1Q96AE4 644 aaKnown RBP12.03□□□□□ -0.48
TRAFD1-205ENST00000548277 TMEM168Q9H0V1 697 aa12.03□□□□□ -0.48
TRAFD1-205ENST00000548277 SEMA6CQ9H3T2 930 aa12.03□□□□□ -0.48
TRAFD1-205ENST00000548277 RDH14Q9HBH5 336 aa12.03□□□□□ -0.48
TRAFD1-205ENST00000548277 FAM207AQ9NSI2 230 aaPredicted RBP12.03□□□□□ -0.48
TRAFD1-205ENST00000548277 GPATCH2LQ9NWQ4 482 aa12.03□□□□□ -0.48
TRAFD1-205ENST00000548277 ADAM22Q9P0K1 906 aa12.03□□□□□ -0.48
TRAFD1-205ENST00000548277 SEPT10Q9P0V9 454 aa12.03□□□□□ -0.48
TRAFD1-205ENST00000548277 MFHAS1Q9Y4C4 1052 aa12.03□□□□□ -0.48
TRAFD1-205ENST00000548277 PCDHB11Q9Y5F2 797 aa12.03□□□□□ -0.48
TRAFD1-205ENST00000548277 PCDHGA7Q9Y5G6 932 aa12.03□□□□□ -0.48
TRAFD1-205ENST00000548277 CXorf51AA0A1B0GTR3 108 aa12.02□□□□□ -0.49
TRAFD1-205ENST00000548277 TTC24A2A3L6 582 aaPredicted RBP12.02□□□□□ -0.49
TRAFD1-205ENST00000548277 CACNB4O00305 520 aaPredicted RBP12.02□□□□□ -0.49
TRAFD1-205ENST00000548277 NVLO15381 856 aaKnown RBP12.02□□□□□ -0.49
TRAFD1-205ENST00000548277 GLB1P16278 677 aa12.02□□□□□ -0.49
TRAFD1-205ENST00000548277 ALDH4A1P30038 563 aa12.02□□□□□ -0.49
TRAFD1-205ENST00000548277 SOX5P35711 763 aa12.02□□□□□ -0.49
TRAFD1-205ENST00000548277 NSFP46459 744 aaKnown RBP12.02□□□□□ -0.49
TRAFD1-205ENST00000548277 RGRP47804 291 aa12.02□□□□□ -0.49
TRAFD1-205ENST00000548277 MAZP56270 477 aaKnown RBP12.02□□□□□ -0.49
TRAFD1-205ENST00000548277 OR1D5P58170 312 aa12.02□□□□□ -0.49
TRAFD1-205ENST00000548277 YBEYP58557 167 aaPredicted RBP12.02□□□□□ -0.49
TRAFD1-205ENST00000548277 PTP4A2Q12974 167 aa12.02□□□□□ -0.49
TRAFD1-205ENST00000548277 TCP11X2Q5H9J9 407 aa12.02□□□□□ -0.49
TRAFD1-205ENST00000548277 CLEC17AQ6ZS10 378 aa12.02□□□□□ -0.49
TRAFD1-205ENST00000548277 ZNF677Q86XU0 584 aa12.02□□□□□ -0.49
TRAFD1-205ENST00000548277 PELI3Q8N2H9 469 aa12.02□□□□□ -0.49
TRAFD1-205ENST00000548277 RCBTB1Q8NDN9 531 aa12.02□□□□□ -0.49
TRAFD1-205ENST00000548277 OR56A4Q8NGH8 313 aa12.02□□□□□ -0.49
TRAFD1-205ENST00000548277 ATL2Q8NHH9 583 aa12.02□□□□□ -0.49
TRAFD1-205ENST00000548277 CASKIN2Q8WXE0 1202 aa12.02□□□□□ -0.49
TRAFD1-205ENST00000548277 PCMTD1Q96MG8 357 aaPredicted RBP12.02□□□□□ -0.49
TRAFD1-205ENST00000548277 RBM15Q96T37 977 aaKnown RBP eCLIP12.02□□□□□ -0.49
TRAFD1-205ENST00000548277 LGR4Q9BXB1 951 aa12.02□□□□□ -0.49
TRAFD1-205ENST00000548277 GANQ9H2C0 597 aa12.02□□□□□ -0.49
TRAFD1-205ENST00000548277 RETREG1Q9H6L5 497 aa12.02□□□□□ -0.49
TRAFD1-205ENST00000548277 CATSPERBQ9H7T0 1116 aa12.02□□□□□ -0.49
TRAFD1-205ENST00000548277 FGF22Q9HCT0 170 aa12.02□□□□□ -0.49
TRAFD1-205ENST00000548277 FZD10Q9ULW2 581 aa12.02□□□□□ -0.49
TRAFD1-205ENST00000548277 ATP8A1Q9Y2Q0 1164 aa12.02□□□□□ -0.49
TRAFD1-205ENST00000548277 DOPEY2Q9Y3R5 2298 aa12.02□□□□□ -0.49
TRAFD1-205ENST00000548277 C9orf172C9J069 976 aa12.01□□□□□ -0.49
TRAFD1-205ENST00000548277 EPHB6O15197 1021 aa12.01□□□□□ -0.49
TRAFD1-205ENST00000548277 B4GAT1O43505 415 aa12.01□□□□□ -0.49
TRAFD1-205ENST00000548277 RECQL5O94762 991 aaPredicted RBP12.01□□□□□ -0.49
TRAFD1-205ENST00000548277 UNGP13051 313 aaPredicted RBP12.01□□□□□ -0.49
TRAFD1-205ENST00000548277 CCL4P13236 92 aa12.01□□□□□ -0.49
TRAFD1-205ENST00000548277 ITGB6P18564 788 aa12.01□□□□□ -0.49
TRAFD1-205ENST00000548277 EEF1GP26641 437 aaKnown RBP12.01□□□□□ -0.49
TRAFD1-205ENST00000548277 CCKBRP32239 447 aa12.01□□□□□ -0.49
TRAFD1-205ENST00000548277 CSRP3P50461 194 aa12.01□□□□□ -0.49
TRAFD1-205ENST00000548277 PAPOLAP51003 745 aaKnown RBP12.01□□□□□ -0.49
TRAFD1-205ENST00000548277 RPL7AP62424 266 aaKnown RBP12.01□□□□□ -0.49
TRAFD1-205ENST00000548277 ZFP36L1Q07352 338 aaKnown RBP12.01□□□□□ -0.49
TRAFD1-205ENST00000548277 MTM1Q13496 603 aa12.01□□□□□ -0.49
TRAFD1-205ENST00000548277 C16orf72Q14CZ0 275 aa12.01□□□□□ -0.49
TRAFD1-205ENST00000548277 ACOX1Q15067 660 aa12.01□□□□□ -0.49
TRAFD1-205ENST00000548277 TBR1Q16650 682 aa12.01□□□□□ -0.49
TRAFD1-205ENST00000548277 MAP9Q49MG5 647 aa12.01□□□□□ -0.49
TRAFD1-205ENST00000548277 C14orf28Q4W4Y0 310 aa12.01□□□□□ -0.49
TRAFD1-205ENST00000548277 CT47A1Q5JQC4 288 aaPredicted RBP12.01□□□□□ -0.49
TRAFD1-205ENST00000548277 SPECC1LQ69YQ0 1117 aa12.01□□□□□ -0.49
TRAFD1-205ENST00000548277 OGFOD3Q6PK18 319 aa12.01□□□□□ -0.49
TRAFD1-205ENST00000548277 SPRED1Q7Z699 444 aa12.01□□□□□ -0.49
TRAFD1-205ENST00000548277 SRLQ86TD4 932 aa12.01□□□□□ -0.49
TRAFD1-205ENST00000548277 PTRH1Q86Y79 214 aaKnown RBP12.01□□□□□ -0.49
TRAFD1-205ENST00000548277 ZSCAN1Q8NBB4 408 aa12.01□□□□□ -0.49
TRAFD1-205ENST00000548277 TSEN2Q8NCE0 465 aaKnown RBP12.01□□□□□ -0.49
TRAFD1-205ENST00000548277 OR6C4Q8NGE1 309 aa12.01□□□□□ -0.49
TRAFD1-205ENST00000548277 NTAN1Q96AB6 310 aa12.01□□□□□ -0.49
TRAFD1-205ENST00000548277 MCEEQ96PE7 176 aa12.01□□□□□ -0.49
TRAFD1-205ENST00000548277 CMKLR1Q99788 373 aa12.01□□□□□ -0.49
TRAFD1-205ENST00000548277 SLC39A8Q9C0K1 460 aa12.01□□□□□ -0.49
TRAFD1-205ENST00000548277 SPATS2LQ9NUQ6 558 aaKnown RBP12.01□□□□□ -0.49
TRAFD1-205ENST00000548277 APPL1Q9UKG1 709 aa12.01□□□□□ -0.49
TRAFD1-205ENST00000548277 PCDHGA4Q9Y5G9 962 aa12.01□□□□□ -0.49
TRAFD1-205ENST00000548277 ASH1LQ9NR48 2969 aaKnown RBP12.01□□□□□ -0.49
TRAFD1-205ENST00000548277 TENM4Q6N022 2769 aa12□□□□□ -0.49
TRAFD1-205ENST00000548277 GOLGA6CA6NDK9 693 aa12□□□□□ -0.49
TRAFD1-205ENST00000548277 GOLGA6BA6NDN3 693 aa12□□□□□ -0.49
TRAFD1-205ENST00000548277 SIGLEC16A6NMB1 481 aa12□□□□□ -0.49
TRAFD1-205ENST00000548277 PALMO75781 387 aa12□□□□□ -0.49
TRAFD1-205ENST00000548277 ELFN1P0C7U0 828 aa12□□□□□ -0.49
TRAFD1-205ENST00000548277 GOLGA6DP0CG33 693 aa12□□□□□ -0.49
TRAFD1-205ENST00000548277 MPSTP25325 297 aa12□□□□□ -0.49
TRAFD1-205ENST00000548277 MMP12P39900 470 aa12□□□□□ -0.49
TRAFD1-205ENST00000548277 STAT1P42224 750 aa12□□□□□ -0.49
TRAFD1-205ENST00000548277 PPM1FP49593 454 aaPredicted RBP12□□□□□ -0.49
TRAFD1-205ENST00000548277 SUOXP51687 545 aa12□□□□□ -0.49
TRAFD1-205ENST00000548277 TPI1P60174 286 aa12□□□□□ -0.49
TRAFD1-205ENST00000548277 BCL2L1Q07817 233 aa12□□□□□ -0.49
TRAFD1-205ENST00000548277 RALGDSQ12967 914 aa12□□□□□ -0.49
TRAFD1-205ENST00000548277 CLCA4Q14CN2 919 aa12□□□□□ -0.49
TRAFD1-205ENST00000548277 SYCP1Q15431 976 aa12□□□□□ -0.49
TRAFD1-205ENST00000548277 PARP15Q460N3 678 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms