RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 TGM2P21980 687 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 AMPD1P23109 780 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 IL1R2P27930 398 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 HTR1BP28222 390 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 SERPINA4P29622 427 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 ACTN2P35609 894 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 PRKCIP41743 596 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 SSR1P43307 286 aaKnown RBP6.75□□□□□ -1.33
SCAF11-211ENST00000547950 CSNK1DP48730 415 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 HCAR3P49019 387 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 SUOXP51687 545 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 UBASH3AP57075 661 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 POLR2LP62875 67 aaKnown RBP6.75□□□□□ -1.33
SCAF11-211ENST00000547950 TPM4P67936 248 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 FANCCQ00597 558 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 BCL2L1Q07817 233 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 IL10RBQ08334 325 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 SLC10A7Q0GE19 358 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 CCDC173Q0VFZ6 552 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 COL9A2Q14055 689 aaPredicted RBP6.75□□□□□ -1.33
SCAF11-211ENST00000547950 IRF4Q15306 451 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 NR0B2Q15466 257 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 ALG11Q2TAA5 492 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 SMTNL2Q2TAL5 461 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 BOLA3Q53S33 107 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 TDRD12Q587J7 1177 aaKnown RBP6.75□□□□□ -1.33
SCAF11-211ENST00000547950 CDCP2Q5VXM1 449 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 AFMIDQ63HM1 303 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 ZCCHC8Q6NZY4 707 aaKnown RBP6.75□□□□□ -1.33
SCAF11-211ENST00000547950 GUSBP11Q6P575 273 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 FOXR1Q6PIV2 292 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 BRAT1Q6PJG6 821 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 MACC1Q6ZN28 852 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 LUZP1Q86V48 1076 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 ZSWIM9Q86XI8 627 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 PSTKQ8IV42 348 aaKnown RBP6.75□□□□□ -1.33
SCAF11-211ENST00000547950 CACTIN-AS1Q8N1I8 211 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 NPWQ8N729 165 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 PLA2G15Q8NCC3 412 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 FNIP1Q8TF40 1166 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 PDCD6IPQ8WUM4 868 aaKnown RBP6.75□□□□□ -1.33
SCAF11-211ENST00000547950 SCG3Q8WXD2 468 aaKnown RBP6.75□□□□□ -1.33
SCAF11-211ENST00000547950 FGF11Q92914 225 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 GLMNQ92990 594 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 TRIM11Q96F44 468 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 NAF1Q96HR8 494 aaKnown RBP6.75□□□□□ -1.33
SCAF11-211ENST00000547950 BTBD6Q96KE9 485 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 DEPDC7Q96QD5 511 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 TUBGCP5Q96RT8 1024 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 EIF3CQ99613 913 aaKnown RBP6.75□□□□□ -1.33
SCAF11-211ENST00000547950 APOOQ9BUR5 198 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 CLPBQ9H078 707 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 ISCUQ9H1K1 167 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 ATP13A3Q9H7F0 1226 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 USP29Q9HBJ7 922 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 CBX8Q9HC52 389 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 NCKIPSDQ9NZQ3 722 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 SIRPGQ9P1W8 387 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 SALL4Q9UJQ4 1053 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 ATP8A1Q9Y2Q0 1164 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 OR1A2Q9Y585 309 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 RAI2Q9Y5P3 530 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 SCINQ9Y6U3 715 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 U3KQA8 63 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 DSPP15924 2871 aaKnown RBP6.75□□□□□ -1.33
SCAF11-211ENST00000547950 DMXL2Q8TDJ6 3036 aa6.74□□□□□ -1.33
SCAF11-211ENST00000547950 PKD1L2Q7Z442 2459 aa6.74□□□□□ -1.33
SCAF11-211ENST00000547950 SPEGQ15772 3267 aa6.74□□□□□ -1.33
SCAF11-211ENST00000547950 TSPAN11A1L157 253 aa6.74□□□□□ -1.33
SCAF11-211ENST00000547950 EME2A4GXA9 379 aaPredicted RBP6.74□□□□□ -1.33
SCAF11-211ENST00000547950 LMO7DNF2Z398 122 aa6.74□□□□□ -1.33
SCAF11-211ENST00000547950 TOR1BO14657 336 aa6.74□□□□□ -1.33
SCAF11-211ENST00000547950 CASC3O15234 703 aaKnown RBP6.74□□□□□ -1.33
SCAF11-211ENST00000547950 RECQL5O94762 991 aaPredicted RBP6.74□□□□□ -1.33
SCAF11-211ENST00000547950 SERPING1P05155 500 aa6.74□□□□□ -1.33
SCAF11-211ENST00000547950 CELA2BP08218 269 aaPredicted RBP6.74□□□□□ -1.33
SCAF11-211ENST00000547950 RARAP10276 462 aa6.74□□□□□ -1.33
SCAF11-211ENST00000547950 PCK1P35558 622 aa6.74□□□□□ -1.33
SCAF11-211ENST00000547950 ARL4AP40617 200 aa6.74□□□□□ -1.33
SCAF11-211ENST00000547950 ABCG1P45844 678 aa6.74□□□□□ -1.33
SCAF11-211ENST00000547950 PEX5P50542 639 aa6.74□□□□□ -1.33
SCAF11-211ENST00000547950 BLKP51451 505 aa6.74□□□□□ -1.33
SCAF11-211ENST00000547950 RENBPP51606 427 aa6.74□□□□□ -1.33
SCAF11-211ENST00000547950 HK3P52790 923 aa6.74□□□□□ -1.33
SCAF11-211ENST00000547950 SRP54P61011 504 aaKnown RBP6.74□□□□□ -1.33
SCAF11-211ENST00000547950 GABREP78334 506 aa6.74□□□□□ -1.33
SCAF11-211ENST00000547950 NSUN2Q08J23 767 aaKnown RBP eCLIP6.74□□□□□ -1.33
SCAF11-211ENST00000547950 DPYSQ14117 519 aa6.74□□□□□ -1.33
SCAF11-211ENST00000547950 ZNF235Q14590 738 aa6.74□□□□□ -1.33
SCAF11-211ENST00000547950 RFTN1Q14699 578 aaPredicted RBP6.74□□□□□ -1.33
SCAF11-211ENST00000547950 LBRQ14739 615 aaKnown RBP6.74□□□□□ -1.33
SCAF11-211ENST00000547950 ACAP1Q15027 740 aa6.74□□□□□ -1.33
SCAF11-211ENST00000547950 ACOX1Q15067 660 aa6.74□□□□□ -1.33
SCAF11-211ENST00000547950 ISXQ2M1V0 245 aa6.74□□□□□ -1.33
SCAF11-211ENST00000547950 SOWAHCQ53LP3 525 aaPredicted RBP6.74□□□□□ -1.33
SCAF11-211ENST00000547950 PERM1Q5SV97 790 aa6.74□□□□□ -1.33
SCAF11-211ENST00000547950 DENND2CQ68D51 928 aa6.74□□□□□ -1.33
SCAF11-211ENST00000547950 TXNRD3NBQ6F5E7 133 aa6.74□□□□□ -1.33
SCAF11-211ENST00000547950 ESRP1Q6NXG1 681 aaKnown RBP6.74□□□□□ -1.33
SCAF11-211ENST00000547950 MRPL14Q6P1L8 145 aaKnown RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms