RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 ATP13A5Q4VNC0 1218 aa4.73□□□□□ -1.65
SNHG1-224ENST00000545688 FOXL2NBQ6ZUU3 175 aa4.73□□□□□ -1.65
SNHG1-224ENST00000545688 FAM160B2Q86V87 743 aa4.73□□□□□ -1.65
SNHG1-224ENST00000545688 KIAA2013Q8IYS2 634 aa4.73□□□□□ -1.65
SNHG1-224ENST00000545688 KBTBD3Q8NAB2 608 aa4.73□□□□□ -1.65
SNHG1-224ENST00000545688 LSM14AQ8ND56 463 aaKnown RBP4.73□□□□□ -1.65
SNHG1-224ENST00000545688 CCT6BQ92526 530 aa4.73□□□□□ -1.65
SNHG1-224ENST00000545688 TANKQ92844 425 aa4.73□□□□□ -1.65
SNHG1-224ENST00000545688 FEM1CQ96JP0 617 aa4.73□□□□□ -1.65
SNHG1-224ENST00000545688 UHRF2Q96PU4 802 aa4.73□□□□□ -1.65
SNHG1-224ENST00000545688 NUF2Q9BZD4 464 aa4.73□□□□□ -1.65
SNHG1-224ENST00000545688 MMP28Q9H239 520 aa4.73□□□□□ -1.65
SNHG1-224ENST00000545688 TAOK3Q9H2K8 898 aa4.73□□□□□ -1.65
SNHG1-224ENST00000545688 ADAM18Q9Y3Q7 739 aa4.73□□□□□ -1.65
SNHG1-224ENST00000545688 NFE2L3Q9Y4A8 694 aa4.73□□□□□ -1.65
SNHG1-224ENST00000545688 ABCC8Q09428 1581 aa4.73□□□□□ -1.65
SNHG1-224ENST00000545688 WIZO95785 1651 aa4.73□□□□□ -1.65
SNHG1-224ENST00000545688 A0A0G2JPF8 293 aa4.72□□□□□ -1.65
SNHG1-224ENST00000545688 HNRNPCL3B7ZW38 293 aa4.72□□□□□ -1.65
SNHG1-224ENST00000545688 ZNF587BE7ETH6 402 aa4.72□□□□□ -1.65
SNHG1-224ENST00000545688 SOCS6O14544 535 aa4.72□□□□□ -1.65
SNHG1-224ENST00000545688 MID1O15344 667 aa4.72□□□□□ -1.65
SNHG1-224ENST00000545688 HNRNPCL1O60812 293 aaKnown RBP4.72□□□□□ -1.65
SNHG1-224ENST00000545688 HNRNPCL4P0DMR1 293 aa4.72□□□□□ -1.65
SNHG1-224ENST00000545688 PCNAP12004 261 aa4.72□□□□□ -1.65
SNHG1-224ENST00000545688 CHATP28329 748 aa4.72□□□□□ -1.65
SNHG1-224ENST00000545688 ARL4CP56559 192 aa4.72□□□□□ -1.65
SNHG1-224ENST00000545688 HILS1P60008 231 aa4.72□□□□□ -1.65
SNHG1-224ENST00000545688 CHRNDQ07001 517 aa4.72□□□□□ -1.65
SNHG1-224ENST00000545688 PPP6R3Q5H9R7 873 aaPredicted RBP4.72□□□□□ -1.65
SNHG1-224ENST00000545688 ZNF667Q5HYK9 610 aa4.72□□□□□ -1.65
SNHG1-224ENST00000545688 LRRC8EQ6NSJ5 796 aa4.72□□□□□ -1.65
SNHG1-224ENST00000545688 ZNF449Q6P9G9 518 aa4.72□□□□□ -1.65
SNHG1-224ENST00000545688 GDPD4Q6W3E5 623 aa4.72□□□□□ -1.65
SNHG1-224ENST00000545688 B3GNT6Q6ZMB0 384 aa4.72□□□□□ -1.65
SNHG1-224ENST00000545688 SATL1Q86VE3 508 aa4.72□□□□□ -1.65
SNHG1-224ENST00000545688 SFR1Q86XK3 245 aa4.72□□□□□ -1.65
SNHG1-224ENST00000545688 FIG4Q92562 907 aa4.72□□□□□ -1.65
SNHG1-224ENST00000545688 TMEM19Q96HH6 336 aa4.72□□□□□ -1.65
SNHG1-224ENST00000545688 EYA3Q99504 573 aa4.72□□□□□ -1.65
SNHG1-224ENST00000545688 REEP2Q9BRK0 252 aa4.72□□□□□ -1.65
SNHG1-224ENST00000545688 MXRA8Q9BRK3 442 aa4.72□□□□□ -1.65
SNHG1-224ENST00000545688 PHF7Q9BWX1 381 aaPredicted RBP4.72□□□□□ -1.65
SNHG1-224ENST00000545688 PEMTQ9UBM1 199 aa4.72□□□□□ -1.65
SNHG1-224ENST00000545688 CTNNAL1Q9UBT7 734 aa4.72□□□□□ -1.65
SNHG1-224ENST00000545688 KCNS2Q9ULS6 477 aa4.72□□□□□ -1.65
SNHG1-224ENST00000545688 VDAC3Q9Y277 283 aa4.72□□□□□ -1.65
SNHG1-224ENST00000545688 ATXN2Q99700 1313 aaKnown RBP4.72□□□□□ -1.65
SNHG1-224ENST00000545688 TSPAN3O60637 253 aa4.71□□□□□ -1.66
SNHG1-224ENST00000545688 NBNO60934 754 aa4.71□□□□□ -1.66
SNHG1-224ENST00000545688 MTA2O94776 668 aa4.71□□□□□ -1.66
SNHG1-224ENST00000545688 KCNA5P22460 613 aa4.71□□□□□ -1.66
SNHG1-224ENST00000545688 GPTP24298 496 aa4.71□□□□□ -1.66
SNHG1-224ENST00000545688 SLC12A1Q13621 1099 aa4.71□□□□□ -1.66
SNHG1-224ENST00000545688 FBXO47Q5MNV8 452 aa4.71□□□□□ -1.66
SNHG1-224ENST00000545688 WDR73Q6P4I2 378 aa4.71□□□□□ -1.66
SNHG1-224ENST00000545688 ADGRG6Q86SQ4 1221 aa4.71□□□□□ -1.66
SNHG1-224ENST00000545688 NOXA1Q86UR1 476 aa4.71□□□□□ -1.66
SNHG1-224ENST00000545688 RUFY2Q8WXA3 655 aa4.71□□□□□ -1.66
SNHG1-224ENST00000545688 SMYD2Q9NRG4 433 aa4.71□□□□□ -1.66
SNHG1-224ENST00000545688 SNTG1Q9NSN8 517 aa4.71□□□□□ -1.66
SNHG1-224ENST00000545688 CARD8Q9Y2G2 431 aa4.71□□□□□ -1.66
SNHG1-224ENST00000545688 PSAT1Q9Y617 370 aa4.71□□□□□ -1.66
SNHG1-224ENST00000545688 GAPVD1Q14C86 1478 aa4.7□□□□□ -1.66
SNHG1-224ENST00000545688 CHD1O14646 1710 aa4.7□□□□□ -1.66
SNHG1-224ENST00000545688 PLRG1O43660 514 aaKnown RBP4.7□□□□□ -1.66
SNHG1-224ENST00000545688 TIPRLO75663 272 aa4.7□□□□□ -1.66
SNHG1-224ENST00000545688 CRYAAP02489 173 aa4.7□□□□□ -1.66
SNHG1-224ENST00000545688 SRCP12931 536 aa4.7□□□□□ -1.66
SNHG1-224ENST00000545688 STX2P32856 288 aa4.7□□□□□ -1.66
SNHG1-224ENST00000545688 ITGADQ13349 1161 aa4.7□□□□□ -1.66
SNHG1-224ENST00000545688 EFR3AQ14156 821 aa4.7□□□□□ -1.66
SNHG1-224ENST00000545688 NEDD9Q14511 834 aa4.7□□□□□ -1.66
SNHG1-224ENST00000545688 MMEL1Q495T6 779 aa4.7□□□□□ -1.66
SNHG1-224ENST00000545688 SERTAD4-AS1Q5TG53 156 aa4.7□□□□□ -1.66
SNHG1-224ENST00000545688 GPAT4Q86UL3 456 aa4.7□□□□□ -1.66
SNHG1-224ENST00000545688 NKAPQ8N5F7 415 aaKnown RBP4.7□□□□□ -1.66
SNHG1-224ENST00000545688 IL17RCQ8NAC3 791 aa4.7□□□□□ -1.66
SNHG1-224ENST00000545688 LNX1Q8TBB1 728 aaPredicted RBP4.7□□□□□ -1.66
SNHG1-224ENST00000545688 PGLYRP2Q96PD5 576 aa4.7□□□□□ -1.66
SNHG1-224ENST00000545688 PTPRHQ9HD43 1115 aa4.7□□□□□ -1.66
SNHG1-224ENST00000545688 DDX4Q9NQI0 724 aaKnown RBP4.7□□□□□ -1.66
SNHG1-224ENST00000545688 BABAM1Q9NWV8 329 aa4.7□□□□□ -1.66
SNHG1-224ENST00000545688 IL1RAPL1Q9NZN1 696 aa4.7□□□□□ -1.66
SNHG1-224ENST00000545688 C1RLQ9NZP8 487 aa4.7□□□□□ -1.66
SNHG1-224ENST00000545688 CGNL1Q0VF96 1302 aa4.7□□□□□ -1.66
SNHG1-224ENST00000545688 POLA1P09884 1462 aaPredicted RBP4.69□□□□□ -1.66
SNHG1-224ENST00000545688 RFPL2O75678 378 aa4.69□□□□□ -1.66
SNHG1-224ENST00000545688 CGAP01215 116 aa4.69□□□□□ -1.66
SNHG1-224ENST00000545688 CD58P19256 250 aa4.69□□□□□ -1.66
SNHG1-224ENST00000545688 GLIPR1P48060 266 aa4.69□□□□□ -1.66
SNHG1-224ENST00000545688 CLCN3P51790 818 aa4.69□□□□□ -1.66
SNHG1-224ENST00000545688 FUT6P51993 359 aa4.69□□□□□ -1.66
SNHG1-224ENST00000545688 OS9Q13438 667 aaPredicted RBP4.69□□□□□ -1.66
SNHG1-224ENST00000545688 WDR45BQ5MNZ6 344 aa4.69□□□□□ -1.66
SNHG1-224ENST00000545688 FAM122CQ6P4D5 195 aa4.69□□□□□ -1.66
SNHG1-224ENST00000545688 CCNI2Q6ZMN8 369 aaPredicted RBP4.69□□□□□ -1.66
SNHG1-224ENST00000545688 MARK2Q7KZI7 788 aaKnown RBP4.69□□□□□ -1.66
SNHG1-224ENST00000545688 CIARTQ8N365 385 aaPredicted RBP4.69□□□□□ -1.66
SNHG1-224ENST00000545688 SPATA5Q8NB90 893 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms