RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 TBL1XO60907 577 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 DTNBO60941 627 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 DNAJC6O75061 913 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 ANXA6P08133 673 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 DLATP10515 647 aaKnown RBP4.18□□□□□ -1.74
SNHG1-220ENST00000544550 CCDC130P13994 396 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 HGFP14210 728 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 IDEP14735 1019 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 WT1P19544 449 aaPredicted RBP4.18□□□□□ -1.74
SNHG1-220ENST00000544550 GNLYP22749 145 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 ADORA2BP29275 332 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 RECQLP46063 649 aaPredicted RBP4.18□□□□□ -1.74
SNHG1-220ENST00000544550 UQCRFS1P47985 274 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 SLC11A2P49281 568 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 SEPHS1P49903 392 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 TOB1P50616 345 aaPredicted RBP4.18□□□□□ -1.74
SNHG1-220ENST00000544550 AP3M2P53677 418 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 MAPK10P53779 464 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 MLLT10P55197 1068 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 SLC8A3P57103 927 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 ECT2LQ008S8 904 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 MC1RQ01726 317 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 SULT2A1Q06520 285 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 EGR3Q06889 387 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 SLC12A1Q13621 1099 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 CDH18Q13634 790 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 PTK2BQ14289 1009 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 PSMD6Q15008 389 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 ME3Q16798 604 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 DEFB133Q30KQ1 61 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 ZNF699Q32M78 642 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 DCAF6Q58WW2 860 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 PITRM1Q5JRX3 1037 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 AGBL4Q5VU57 503 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 C1QL3Q5VWW1 255 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 E4F1Q66K89 784 aaPredicted RBP4.18□□□□□ -1.74
SNHG1-220ENST00000544550 NUGGCQ68CJ6 796 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 TCTN3Q6NUS6 607 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 Q6ZSR6 202 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 GPRIN1Q7Z2K8 1008 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 PTAR1Q7Z6K3 402 aaPredicted RBP4.18□□□□□ -1.74
SNHG1-220ENST00000544550 ABI3BPQ7Z7G0 1075 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 SCD5Q86SK9 330 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 ACOT1Q86TX2 421 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 HORMAD1Q86X24 394 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 ZFAND4Q86XD8 727 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 CBWD2Q8IUF1 395 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 FAM114A1Q8IWE2 563 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 UNC45BQ8IWX7 931 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 ZC3H3Q8IXZ2 948 aaKnown RBP4.18□□□□□ -1.74
SNHG1-220ENST00000544550 SLC22A18ASQ8N1D0 253 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 STK40Q8N2I9 435 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 ARL10Q8N8L6 244 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 FAM184AQ8NB25 1140 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 HJURPQ8NCD3 748 aaPredicted RBP4.18□□□□□ -1.74
SNHG1-220ENST00000544550 CCDC112Q8NEF3 446 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 LMX1AQ8TE12 382 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 RNF139Q8WU17 664 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 USP7Q93009 1102 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 JAKMIP2Q96AA8 810 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 MFSD3Q96ES6 412 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 FAM84AQ96KN4 292 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 PPP1R9BQ96SB3 815 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 BRINP2Q9C0B6 783 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 XYLT2Q9H1B5 865 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 MTG2Q9H4K7 406 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 SMYD3Q9H7B4 428 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 GPR27Q9NS67 375 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 BLOC1S4Q9NUP1 217 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 AP5S1Q9NUS5 200 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 INTS7Q9NVH2 962 aaKnown RBP4.18□□□□□ -1.74
SNHG1-220ENST00000544550 SFMBT1Q9UHJ3 866 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 IPO11Q9UI26 975 aaKnown RBP4.18□□□□□ -1.74
SNHG1-220ENST00000544550 TMEFF2Q9UIK5 374 aaPredicted RBP4.18□□□□□ -1.74
SNHG1-220ENST00000544550 PADI4Q9UM07 663 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 CA5BQ9Y2D0 317 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 KIF3AQ9Y496 699 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 RELNP78509 3460 aa4.18□□□□□ -1.74
SNHG1-220ENST00000544550 ANKRD17O75179 2603 aaKnown RBP4.18□□□□□ -1.74
SNHG1-220ENST00000544550 SCN1AP35498 2009 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 GOLGA4Q13439 2230 aaKnown RBP4.17□□□□□ -1.74
SNHG1-220ENST00000544550 WIPF3A6NGB9 483 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 TTC34A8MYJ7 566 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 LMO7DNF2Z398 122 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 MKRN2OSH3BPM6 223 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 M0QYT0 321 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 EIF3DO15371 548 aaKnown RBP eCLIP4.17□□□□□ -1.74
SNHG1-220ENST00000544550 ZW10O43264 779 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 HNRNPRO43390 633 aaKnown RBP4.17□□□□□ -1.74
SNHG1-220ENST00000544550 SEMA7AO75326 666 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 KIF20AO95235 890 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 PRNPP04156 253 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 RPLP0P05388 317 aaKnown RBP4.17□□□□□ -1.74
SNHG1-220ENST00000544550 PRLRP16471 622 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 ZNF18P17022 549 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 PAMP19021 973 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 ITIH1P19827 911 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 LONP1P36776 959 aaKnown RBP4.17□□□□□ -1.74
SNHG1-220ENST00000544550 BLKP51451 505 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 NDST1P52848 882 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms