RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 SYCP1Q15431 976 aa22.75■■□□□ 1.23
CDKN3-207ENST00000543789 KCTD16Q68DU8 428 aa22.75■■□□□ 1.23
CDKN3-207ENST00000543789 DNAJC24Q6P3W2 148 aa22.75■■□□□ 1.23
CDKN3-207ENST00000543789 MON1BQ7L1V2 547 aa22.75■■□□□ 1.23
CDKN3-207ENST00000543789 PLA2G15Q8NCC3 412 aa22.75■■□□□ 1.23
CDKN3-207ENST00000543789 OR56A4Q8NGH8 313 aa22.75■■□□□ 1.23
CDKN3-207ENST00000543789 OR1E3Q8WZA6 343 aa22.75■■□□□ 1.23
CDKN3-207ENST00000543789 TMEM159Q96B96 161 aa22.75■■□□□ 1.23
CDKN3-207ENST00000543789 CNPY3Q9BT09 278 aa22.75■■□□□ 1.23
CDKN3-207ENST00000543789 NUP62CLQ9H1M0 184 aa22.75■■□□□ 1.23
CDKN3-207ENST00000543789 LRRC19Q9H756 370 aa22.75■■□□□ 1.23
CDKN3-207ENST00000543789 PDFQ9HBH1 243 aa22.75■■□□□ 1.23
CDKN3-207ENST00000543789 SEPT11Q9NVA2 429 aaKnown RBP22.75■■□□□ 1.23
CDKN3-207ENST00000543789 TCRBV5S1A1TA0A578 114 aa22.74■■□□□ 1.23
CDKN3-207ENST00000543789 TMEM202A6NGA9 273 aa22.74■■□□□ 1.23
CDKN3-207ENST00000543789 PRAMEF11O60813 436 aa22.74■■□□□ 1.23
CDKN3-207ENST00000543789 WISP1O95388 367 aa22.74■■□□□ 1.23
CDKN3-207ENST00000543789 HTR7P34969 479 aa22.74■■□□□ 1.23
CDKN3-207ENST00000543789 CSNK1DP48730 415 aa22.74■■□□□ 1.23
CDKN3-207ENST00000543789 NDST2P52849 883 aa22.74■■□□□ 1.23
CDKN3-207ENST00000543789 RPL7AP62424 266 aaKnown RBP22.74■■□□□ 1.23
CDKN3-207ENST00000543789 LINC00303Q3SY05 128 aa22.74■■□□□ 1.23
CDKN3-207ENST00000543789 CERCAMQ5T4B2 595 aa22.74■■□□□ 1.23
CDKN3-207ENST00000543789 SRLQ86TD4 932 aa22.74■■□□□ 1.23
CDKN3-207ENST00000543789 ZSWIM9Q86XI8 627 aa22.74■■□□□ 1.23
CDKN3-207ENST00000543789 FUBP1Q96AE4 644 aaKnown RBP22.74■■□□□ 1.23
CDKN3-207ENST00000543789 MCEEQ96PE7 176 aa22.74■■□□□ 1.23
CDKN3-207ENST00000543789 ATP13A3Q9H7F0 1226 aa22.74■■□□□ 1.23
CDKN3-207ENST00000543789 SEPT10Q9P0V9 454 aa22.74■■□□□ 1.23
CDKN3-207ENST00000543789 GTF3C3Q9Y5Q9 886 aa22.74■■□□□ 1.23
CDKN3-207ENST00000543789 TENM4Q6N022 2769 aa22.74■■□□□ 1.23
CDKN3-207ENST00000543789 CHD5Q8TDI0 1954 aa22.73■■□□□ 1.23
CDKN3-207ENST00000543789 TNFRSF10CO14798 259 aa22.73■■□□□ 1.23
CDKN3-207ENST00000543789 PALMO75781 387 aa22.73■■□□□ 1.23
CDKN3-207ENST00000543789 RECQL5O94762 991 aaPredicted RBP22.73■■□□□ 1.23
CDKN3-207ENST00000543789 HOXC4P09017 264 aaPredicted RBP22.73■■□□□ 1.23
CDKN3-207ENST00000543789 LIPCP11150 499 aa22.73■■□□□ 1.23
CDKN3-207ENST00000543789 KELP23276 732 aa22.73■■□□□ 1.23
CDKN3-207ENST00000543789 SERPINA4P29622 427 aa22.73■■□□□ 1.23
CDKN3-207ENST00000543789 KIAA1024LP59773 190 aa22.73■■□□□ 1.23
CDKN3-207ENST00000543789 TPI1P60174 286 aa22.73■■□□□ 1.23
CDKN3-207ENST00000543789 NFATC3Q12968 1075 aa22.73■■□□□ 1.23
CDKN3-207ENST00000543789 ARHGEF7Q14155 803 aa22.73■■□□□ 1.23
CDKN3-207ENST00000543789 PRICKLE2Q7Z3G6 844 aa22.73■■□□□ 1.23
CDKN3-207ENST00000543789 CELF6Q96J87 481 aaKnown RBP22.73■■□□□ 1.23
CDKN3-207ENST00000543789 CMKLR1Q99788 373 aa22.73■■□□□ 1.23
CDKN3-207ENST00000543789 FAM117AQ9C073 453 aa22.73■■□□□ 1.23
CDKN3-207ENST00000543789 SLC39A8Q9C0K1 460 aa22.73■■□□□ 1.23
CDKN3-207ENST00000543789 FGF22Q9HCT0 170 aa22.73■■□□□ 1.23
CDKN3-207ENST00000543789 MRPL40Q9NQ50 206 aaKnown RBP22.73■■□□□ 1.23
CDKN3-207ENST00000543789 LRIT1Q9P2V4 623 aa22.73■■□□□ 1.23
CDKN3-207ENST00000543789 SIK3Q9Y2K2 1263 aa22.73■■□□□ 1.23
CDKN3-207ENST00000543789 RNF215Q9Y6U7 377 aa22.73■■□□□ 1.23
CDKN3-207ENST00000543789 ARHGAP42A6NI28 874 aa22.72■■□□□ 1.23
CDKN3-207ENST00000543789 ITGB2P05107 769 aa22.72■■□□□ 1.23
CDKN3-207ENST00000543789 ITIH1P19827 911 aa22.72■■□□□ 1.23
CDKN3-207ENST00000543789 RGRP47804 291 aa22.72■■□□□ 1.23
CDKN3-207ENST00000543789 PAPOLAP51003 745 aaKnown RBP22.72■■□□□ 1.23
CDKN3-207ENST00000543789 SRSF6Q13247 344 aaKnown RBP22.72■■□□□ 1.23
CDKN3-207ENST00000543789 C14orf28Q4W4Y0 310 aa22.72■■□□□ 1.23
CDKN3-207ENST00000543789 CDKAL1Q5VV42 579 aa22.72■■□□□ 1.23
CDKN3-207ENST00000543789 DCUN1D2Q6PH85 259 aa22.72■■□□□ 1.23
CDKN3-207ENST00000543789 LIPIQ6XZB0 460 aa22.72■■□□□ 1.23
CDKN3-207ENST00000543789 SPRED1Q7Z699 444 aa22.72■■□□□ 1.23
CDKN3-207ENST00000543789 TSEN2Q8NCE0 465 aaKnown RBP22.72■■□□□ 1.23
CDKN3-207ENST00000543789 PCMTD1Q96MG8 357 aaPredicted RBP22.72■■□□□ 1.23
CDKN3-207ENST00000543789 ARHGAP9Q9BRR9 750 aa22.72■■□□□ 1.23
CDKN3-207ENST00000543789 TMEM168Q9H0V1 697 aa22.72■■□□□ 1.23
CDKN3-207ENST00000543789 DPEP2Q9H4A9 486 aa22.72■■□□□ 1.23
CDKN3-207ENST00000543789 HEMK1Q9Y5R4 338 aaPredicted RBP22.72■■□□□ 1.23
CDKN3-207ENST00000543789 AGRPO00253 132 aa22.71■■□□□ 1.23
CDKN3-207ENST00000543789 ELFN1P0C7U0 828 aa22.71■■□□□ 1.23
CDKN3-207ENST00000543789 DESP17661 470 aa22.71■■□□□ 1.23
CDKN3-207ENST00000543789 TRIM23P36406 574 aa22.71■■□□□ 1.23
CDKN3-207ENST00000543789 POLR2LP62875 67 aaKnown RBP22.71■■□□□ 1.23
CDKN3-207ENST00000543789 BCL2L1Q07817 233 aa22.71■■□□□ 1.23
CDKN3-207ENST00000543789 RALGDSQ12967 914 aa22.71■■□□□ 1.23
CDKN3-207ENST00000543789 HLTFQ14527 1009 aaKnown RBP eCLIP22.71■■□□□ 1.23
CDKN3-207ENST00000543789 KIF26BQ2KJY2 2108 aa22.71■■□□□ 1.23
CDKN3-207ENST00000543789 MANEAQ5SRI9 462 aa22.71■■□□□ 1.23
CDKN3-207ENST00000543789 PPP1R15BQ5SWA1 713 aa22.71■■□□□ 1.23
CDKN3-207ENST00000543789 AFMIDQ63HM1 303 aa22.71■■□□□ 1.23
CDKN3-207ENST00000543789 SFTPA2Q8IWL1 248 aa22.71■■□□□ 1.23
CDKN3-207ENST00000543789 EXTL1Q92935 676 aa22.71■■□□□ 1.23
CDKN3-207ENST00000543789 USP7Q93009 1102 aa22.71■■□□□ 1.23
CDKN3-207ENST00000543789 AGPAT1Q99943 283 aa22.71■■□□□ 1.23
CDKN3-207ENST00000543789 PCDHB11Q9Y5F2 797 aa22.71■■□□□ 1.23
CDKN3-207ENST00000543789 PRAMEF33A0A0G2JMD5 474 aa22.7■■□□□ 1.22
CDKN3-207ENST00000543789 B4DGG1 531 aa22.7■■□□□ 1.22
CDKN3-207ENST00000543789 NUDT21O43809 227 aaKnown RBP22.7■■□□□ 1.22
CDKN3-207ENST00000543789 PRAMEF10O60809 474 aa22.7■■□□□ 1.22
CDKN3-207ENST00000543789 NSUN2Q08J23 767 aaKnown RBP eCLIP22.7■■□□□ 1.22
CDKN3-207ENST00000543789 SPECC1LQ69YQ0 1117 aa22.7■■□□□ 1.22
CDKN3-207ENST00000543789 PAF1Q8N7H5 531 aa22.7■■□□□ 1.22
CDKN3-207ENST00000543789 NEK11Q8NG66 645 aa22.7■■□□□ 1.22
CDKN3-207ENST00000543789 ECHDC3Q96DC8 303 aa22.7■■□□□ 1.22
CDKN3-207ENST00000543789 CYP4F12Q9HCS2 524 aa22.7■■□□□ 1.22
CDKN3-207ENST00000543789 GPATCH2LQ9NWQ4 482 aa22.7■■□□□ 1.22
CDKN3-207ENST00000543789 MOSPD1Q9UJG1 213 aa22.7■■□□□ 1.22
CDKN3-207ENST00000543789 PIEZO2Q9H5I5 2752 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms