RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 TPRP12270 2363 aaKnown RBP15.52■□□□□ 0.08
ECHDC2-223ENST00000542552 TNFSF14O43557 240 aa15.52■□□□□ 0.08
ECHDC2-223ENST00000542552 ZRANB2O95218 330 aaKnown RBP eCLIP15.52■□□□□ 0.08
ECHDC2-223ENST00000542552 TRIM16O95361 564 aa15.52■□□□□ 0.08
ECHDC2-223ENST00000542552 CPP00450 1065 aa15.52■□□□□ 0.08
ECHDC2-223ENST00000542552 CSF2P04141 144 aa15.52■□□□□ 0.08
ECHDC2-223ENST00000542552 HLA-DQB2P05538 268 aa15.52■□□□□ 0.08
ECHDC2-223ENST00000542552 ATXN1LP0C7T5 689 aaKnown RBP15.52■□□□□ 0.08
ECHDC2-223ENST00000542552 DGKAP23743 735 aa15.52■□□□□ 0.08
ECHDC2-223ENST00000542552 NR2C2P49116 596 aa15.52■□□□□ 0.08
ECHDC2-223ENST00000542552 ADCY2Q08462 1091 aa15.52■□□□□ 0.08
ECHDC2-223ENST00000542552 NIPAL4Q0D2K0 466 aa15.52■□□□□ 0.08
ECHDC2-223ENST00000542552 TFDP2Q14188 446 aa15.52■□□□□ 0.08
ECHDC2-223ENST00000542552 PDK1Q15118 436 aa15.52■□□□□ 0.08
ECHDC2-223ENST00000542552 IRF4Q15306 451 aa15.52■□□□□ 0.08
ECHDC2-223ENST00000542552 ODF2Q5BJF6 829 aa15.52■□□□□ 0.08
ECHDC2-223ENST00000542552 RAB44Q7Z6P3 723 aaPredicted RBP15.52■□□□□ 0.08
ECHDC2-223ENST00000542552 CNTD1Q8N815 330 aa15.52■□□□□ 0.08
ECHDC2-223ENST00000542552 LRRC57Q8N9N7 239 aa15.52■□□□□ 0.08
ECHDC2-223ENST00000542552 EXD1Q8NHP7 514 aa15.52■□□□□ 0.08
ECHDC2-223ENST00000542552 PIH1D2Q8WWB5 315 aa15.52■□□□□ 0.08
ECHDC2-223ENST00000542552 KRT35Q92764 455 aa15.52■□□□□ 0.08
ECHDC2-223ENST00000542552 SCRN2Q96FV2 425 aa15.52■□□□□ 0.08
ECHDC2-223ENST00000542552 BRD8Q9H0E9 1235 aa15.52■□□□□ 0.08
ECHDC2-223ENST00000542552 CAAP1Q9H8G2 361 aa15.52■□□□□ 0.08
ECHDC2-223ENST00000542552 HAUS2Q9NVX0 235 aa15.52■□□□□ 0.08
ECHDC2-223ENST00000542552 B4GALT6Q9UBX8 382 aa15.52■□□□□ 0.08
ECHDC2-223ENST00000542552 RAI2Q9Y5P3 530 aa15.52■□□□□ 0.08
ECHDC2-223ENST00000542552 hCG_1818297A0A087WSY0 165 aa15.51■□□□□ 0.07
ECHDC2-223ENST00000542552 KCNK1O00180 336 aa15.51■□□□□ 0.07
ECHDC2-223ENST00000542552 PIAS2O75928 621 aa15.51■□□□□ 0.07
ECHDC2-223ENST00000542552 TOP3BO95985 862 aaKnown RBP15.51■□□□□ 0.07
ECHDC2-223ENST00000542552 JCHAINP01591 159 aa15.51■□□□□ 0.07
ECHDC2-223ENST00000542552 MMP2P08253 660 aa15.51■□□□□ 0.07
ECHDC2-223ENST00000542552 PDHA1P08559 390 aa15.51■□□□□ 0.07
ECHDC2-223ENST00000542552 ELFN1P0C7U0 828 aa15.51■□□□□ 0.07
ECHDC2-223ENST00000542552 GIMD1P0DJR0 217 aa15.51■□□□□ 0.07
ECHDC2-223ENST00000542552 KRT10P13645 584 aa15.51■□□□□ 0.07
ECHDC2-223ENST00000542552 NME1P15531 152 aaKnown RBP15.51■□□□□ 0.07
ECHDC2-223ENST00000542552 VIPR1P32241 457 aa15.51■□□□□ 0.07
ECHDC2-223ENST00000542552 CTNNA1P35221 906 aaKnown RBP15.51■□□□□ 0.07
ECHDC2-223ENST00000542552 DSC2Q02487 901 aa15.51■□□□□ 0.07
ECHDC2-223ENST00000542552 ITKQ08881 620 aa15.51■□□□□ 0.07
ECHDC2-223ENST00000542552 FOXC1Q12948 553 aa15.51■□□□□ 0.07
ECHDC2-223ENST00000542552 ZBTB17Q13105 803 aa15.51■□□□□ 0.07
ECHDC2-223ENST00000542552 PDE1CQ14123 709 aaPredicted RBP15.51■□□□□ 0.07
ECHDC2-223ENST00000542552 TFDP3Q5H9I0 405 aa15.51■□□□□ 0.07
ECHDC2-223ENST00000542552 ARMC12Q5T9G4 340 aa15.51■□□□□ 0.07
ECHDC2-223ENST00000542552 PARGQ86W56 976 aa15.51■□□□□ 0.07
ECHDC2-223ENST00000542552 EID2Q8N6I1 236 aa15.51■□□□□ 0.07
ECHDC2-223ENST00000542552 PDCD6IPQ8WUM4 868 aaKnown RBP15.51■□□□□ 0.07
ECHDC2-223ENST00000542552 ADAMTS14Q8WXS8 1223 aa15.51■□□□□ 0.07
ECHDC2-223ENST00000542552 COQ10AQ96MF6 247 aa15.51■□□□□ 0.07
ECHDC2-223ENST00000542552 UCKL1Q9NWZ5 548 aa15.51■□□□□ 0.07
ECHDC2-223ENST00000542552 KLF15Q9UIH9 416 aa15.51■□□□□ 0.07
ECHDC2-223ENST00000542552 APOBEC2Q9Y235 224 aaKnown RBP15.51■□□□□ 0.07
ECHDC2-223ENST00000542552 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.51■□□□□ 0.07
ECHDC2-223ENST00000542552 PCDHA3Q9Y5H8 950 aa15.51■□□□□ 0.07
ECHDC2-223ENST00000542552 FAM221BA6H8Z2 402 aa15.5■□□□□ 0.07
ECHDC2-223ENST00000542552 PPP1R12AO14974 1030 aaPredicted RBP15.5■□□□□ 0.07
ECHDC2-223ENST00000542552 LZTS3O60299 673 aaPredicted RBP15.5■□□□□ 0.07
ECHDC2-223ENST00000542552 CST8O60676 142 aa15.5■□□□□ 0.07
ECHDC2-223ENST00000542552 SDC3O75056 442 aa15.5■□□□□ 0.07
ECHDC2-223ENST00000542552 RECQL5O94762 991 aaPredicted RBP15.5■□□□□ 0.07
ECHDC2-223ENST00000542552 HEXIM1O94992 359 aaKnown RBP15.5■□□□□ 0.07
ECHDC2-223ENST00000542552 PRLP01236 227 aa15.5■□□□□ 0.07
ECHDC2-223ENST00000542552 PECAM1P16284 738 aaPredicted RBP15.5■□□□□ 0.07
ECHDC2-223ENST00000542552 LHCGRP22888 699 aa15.5■□□□□ 0.07
ECHDC2-223ENST00000542552 PEX5P50542 639 aa15.5■□□□□ 0.07
ECHDC2-223ENST00000542552 DYNLT1P63172 113 aa15.5■□□□□ 0.07
ECHDC2-223ENST00000542552 AP1B1Q10567 949 aa15.5■□□□□ 0.07
ECHDC2-223ENST00000542552 EIF2B5Q13144 721 aaKnown RBP15.5■□□□□ 0.07
ECHDC2-223ENST00000542552 INPP5AQ14642 412 aa15.5■□□□□ 0.07
ECHDC2-223ENST00000542552 PRKD1Q15139 912 aaPredicted RBP15.5■□□□□ 0.07
ECHDC2-223ENST00000542552 CNGA3Q16281 694 aa15.5■□□□□ 0.07
ECHDC2-223ENST00000542552 PPP2R5EQ16537 467 aa15.5■□□□□ 0.07
ECHDC2-223ENST00000542552 ZNF542PQ5EBM4 170 aa15.5■□□□□ 0.07
ECHDC2-223ENST00000542552 MACC1Q6ZN28 852 aa15.5■□□□□ 0.07
ECHDC2-223ENST00000542552 PAF1Q8N7H5 531 aa15.5■□□□□ 0.07
ECHDC2-223ENST00000542552 KIAA1524Q8TCG1 905 aa15.5■□□□□ 0.07
ECHDC2-223ENST00000542552 RBM41Q96IZ5 413 aaKnown RBP15.5■□□□□ 0.07
ECHDC2-223ENST00000542552 TDRD1Q9BXT4 1180 aaKnown RBP15.5■□□□□ 0.07
ECHDC2-223ENST00000542552 DNAJC28Q9NX36 388 aa15.5■□□□□ 0.07
ECHDC2-223ENST00000542552 SAE1Q9UBE0 346 aaPredicted RBP15.5■□□□□ 0.07
ECHDC2-223ENST00000542552 FTSJ1Q9UET6 329 aa15.5■□□□□ 0.07
ECHDC2-223ENST00000542552 PNMA8BQ9ULN7 279 aaPredicted RBP15.5■□□□□ 0.07
ECHDC2-223ENST00000542552 FREM2Q5SZK8 3169 aa15.49■□□□□ 0.07
ECHDC2-223ENST00000542552 A0A0U1RQJ8 604 aa15.49■□□□□ 0.07
ECHDC2-223ENST00000542552 GRID2IPA4D2P6 1211 aa15.49■□□□□ 0.07
ECHDC2-223ENST00000542552 NPIPB15A6NHN6 443 aaPredicted RBP15.49■□□□□ 0.07
ECHDC2-223ENST00000542552 A8MX80 341 aa15.49■□□□□ 0.07
ECHDC2-223ENST00000542552 TRIM38O00635 465 aa15.49■□□□□ 0.07
ECHDC2-223ENST00000542552 HYAL3O43820 417 aaPredicted RBP15.49■□□□□ 0.07
ECHDC2-223ENST00000542552 LDOC1O95751 146 aaPredicted RBP15.49■□□□□ 0.07
ECHDC2-223ENST00000542552 TGM2P21980 687 aa15.49■□□□□ 0.07
ECHDC2-223ENST00000542552 NFKBIAP25963 317 aa15.49■□□□□ 0.07
ECHDC2-223ENST00000542552 CTNNA2P26232 953 aa15.49■□□□□ 0.07
ECHDC2-223ENST00000542552 THOP1P52888 689 aa15.49■□□□□ 0.07
ECHDC2-223ENST00000542552 COPS2P61201 443 aa15.49■□□□□ 0.07
ECHDC2-223ENST00000542552 RPL26P61254 145 aaKnown RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms