RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 SOCS5O75159 536 aa9.39□□□□□ -0.91
DDX55-208ENST00000541259 NDST3O95803 873 aa9.39□□□□□ -0.91
DDX55-208ENST00000541259 CPP00450 1065 aa9.39□□□□□ -0.91
DDX55-208ENST00000541259 EPOP01588 193 aa9.39□□□□□ -0.91
DDX55-208ENST00000541259 ALPIP09923 528 aa9.39□□□□□ -0.91
DDX55-208ENST00000541259 FAM153BP0C7A2 387 aa9.39□□□□□ -0.91
DDX55-208ENST00000541259 GABRG2P18507 467 aa9.39□□□□□ -0.91
DDX55-208ENST00000541259 MGAT1P26572 445 aa9.39□□□□□ -0.91
DDX55-208ENST00000541259 ABL2P42684 1182 aa9.39□□□□□ -0.91
DDX55-208ENST00000541259 SESN2P58004 480 aaPredicted RBP9.39□□□□□ -0.91
DDX55-208ENST00000541259 CRADDP78560 199 aa9.39□□□□□ -0.91
DDX55-208ENST00000541259 CDK16Q00536 496 aa9.39□□□□□ -0.91
DDX55-208ENST00000541259 CNTN1Q12860 1018 aa9.39□□□□□ -0.91
DDX55-208ENST00000541259 MTAPQ13126 283 aa9.39□□□□□ -0.91
DDX55-208ENST00000541259 CUL1Q13616 776 aa9.39□□□□□ -0.91
DDX55-208ENST00000541259 HLTFQ14527 1009 aaKnown RBP eCLIP9.39□□□□□ -0.91
DDX55-208ENST00000541259 GRM3Q14832 879 aa9.39□□□□□ -0.91
DDX55-208ENST00000541259 CST6Q15828 149 aa9.39□□□□□ -0.91
DDX55-208ENST00000541259 FAM153CQ494X1 144 aa9.39□□□□□ -0.91
DDX55-208ENST00000541259 ZNF805Q5CZA5 627 aa9.39□□□□□ -0.91
DDX55-208ENST00000541259 HP1BP3Q5SSJ5 553 aaPredicted RBP9.39□□□□□ -0.91
DDX55-208ENST00000541259 DENND2CQ68D51 928 aa9.39□□□□□ -0.91
DDX55-208ENST00000541259 PARS2Q7L3T8 475 aaKnown RBP9.39□□□□□ -0.91
DDX55-208ENST00000541259 SYT13Q7L8C5 426 aa9.39□□□□□ -0.91
DDX55-208ENST00000541259 IGDCC3Q8IVU1 814 aa9.39□□□□□ -0.91
DDX55-208ENST00000541259 MPP5Q8N3R9 675 aa9.39□□□□□ -0.91
DDX55-208ENST00000541259 ZCCHC9Q8N567 271 aaKnown RBP9.39□□□□□ -0.91
DDX55-208ENST00000541259 AADATQ8N5Z0 425 aa9.39□□□□□ -0.91
DDX55-208ENST00000541259 FAM160A2Q8N612 972 aaPredicted RBP9.39□□□□□ -0.91
DDX55-208ENST00000541259 DNAAF3Q8N9W5 541 aa9.39□□□□□ -0.91
DDX55-208ENST00000541259 RMDN1Q96DB5 314 aa9.39□□□□□ -0.91
DDX55-208ENST00000541259 LRIG1Q96JA1 1093 aa9.39□□□□□ -0.91
DDX55-208ENST00000541259 OSBPL1AQ9BXW6 950 aa9.39□□□□□ -0.91
DDX55-208ENST00000541259 CHRDQ9H2X0 955 aa9.39□□□□□ -0.91
DDX55-208ENST00000541259 ARNT2Q9HBZ2 717 aa9.39□□□□□ -0.91
DDX55-208ENST00000541259 DLGAP2Q9P1A6 1054 aa9.39□□□□□ -0.91
DDX55-208ENST00000541259 SERGEFQ9UGK8 458 aa9.39□□□□□ -0.91
DDX55-208ENST00000541259 ABCA7Q8IZY2 2146 aa9.38□□□□□ -0.91
DDX55-208ENST00000541259 A0A0J9YYE9 177 aa9.38□□□□□ -0.91
DDX55-208ENST00000541259 A0A1W2PP55 124 aa9.38□□□□□ -0.91
DDX55-208ENST00000541259 C1QTNF3-AMACRE9PGA6 284 aa9.38□□□□□ -0.91
DDX55-208ENST00000541259 AURKAO14965 403 aa9.38□□□□□ -0.91
DDX55-208ENST00000541259 SPINT1O43278 529 aa9.38□□□□□ -0.91
DDX55-208ENST00000541259 RNASEH1O60930 286 aaKnown RBP9.38□□□□□ -0.91
DDX55-208ENST00000541259 ATG13O75143 517 aa9.38□□□□□ -0.91
DDX55-208ENST00000541259 TRBC1P01850 177 aa9.38□□□□□ -0.91
DDX55-208ENST00000541259 FGF1P05230 155 aa9.38□□□□□ -0.91
DDX55-208ENST00000541259 ALADP13716 330 aa9.38□□□□□ -0.91
DDX55-208ENST00000541259 HLA-DPA1P20036 260 aa9.38□□□□□ -0.91
DDX55-208ENST00000541259 CA4P22748 312 aa9.38□□□□□ -0.91
DDX55-208ENST00000541259 ITGB7P26010 798 aa9.38□□□□□ -0.91
DDX55-208ENST00000541259 TNFRSF8P28908 595 aa9.38□□□□□ -0.91
DDX55-208ENST00000541259 DRD3P35462 400 aa9.38□□□□□ -0.91
DDX55-208ENST00000541259 HNF1BP35680 557 aa9.38□□□□□ -0.91
DDX55-208ENST00000541259 MAGEA3P43357 314 aa9.38□□□□□ -0.91
DDX55-208ENST00000541259 RPS9P46781 194 aaKnown RBP9.38□□□□□ -0.91
DDX55-208ENST00000541259 EPHB1P54762 984 aa9.38□□□□□ -0.91
DDX55-208ENST00000541259 SARNPP82979 210 aaKnown RBP9.38□□□□□ -0.91
DDX55-208ENST00000541259 CAV1Q03135 178 aa9.38□□□□□ -0.91
DDX55-208ENST00000541259 DHX9Q08211 1270 aaKnown RBP9.38□□□□□ -0.91
DDX55-208ENST00000541259 CDH17Q12864 832 aa9.38□□□□□ -0.91
DDX55-208ENST00000541259 POU6F1Q14863 301 aa9.38□□□□□ -0.91
DDX55-208ENST00000541259 FASTKD3Q14CZ7 662 aaKnown RBP9.38□□□□□ -0.91
DDX55-208ENST00000541259 BBS9Q3SYG4 887 aa9.38□□□□□ -0.91
DDX55-208ENST00000541259 CCDC38Q502W7 563 aa9.38□□□□□ -0.91
DDX55-208ENST00000541259 CFAP58Q5T655 872 aa9.38□□□□□ -0.91
DDX55-208ENST00000541259 ZNF776Q68DI1 518 aaPredicted RBP9.38□□□□□ -0.91
DDX55-208ENST00000541259 WDR93Q6P2C0 686 aa9.38□□□□□ -0.91
DDX55-208ENST00000541259 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.38□□□□□ -0.91
DDX55-208ENST00000541259 MICALCLQ6ZW33 695 aa9.38□□□□□ -0.91
DDX55-208ENST00000541259 DSG4Q86SJ6 1040 aa9.38□□□□□ -0.91
DDX55-208ENST00000541259 LINC00523Q86TU6 105 aa9.38□□□□□ -0.91
DDX55-208ENST00000541259 TTC7BQ86TV6 843 aa9.38□□□□□ -0.91
DDX55-208ENST00000541259 CCDC25Q86WR0 208 aa9.38□□□□□ -0.91
DDX55-208ENST00000541259 ANKMY2Q8IV38 441 aa9.38□□□□□ -0.91
DDX55-208ENST00000541259 SPEM1Q8N4L4 309 aa9.38□□□□□ -0.91
DDX55-208ENST00000541259 PAF1Q8N7H5 531 aa9.38□□□□□ -0.91
DDX55-208ENST00000541259 MDGA1Q8NFP4 955 aa9.38□□□□□ -0.91
DDX55-208ENST00000541259 HMGB4Q8WW32 186 aa9.38□□□□□ -0.91
DDX55-208ENST00000541259 MRGPRX1Q96LB2 322 aa9.38□□□□□ -0.91
DDX55-208ENST00000541259 SIGLEC10Q96LC7 697 aa9.38□□□□□ -0.91
DDX55-208ENST00000541259 HHIPQ96QV1 700 aa9.38□□□□□ -0.91
DDX55-208ENST00000541259 WDR83Q9BRX9 315 aaKnown RBP9.38□□□□□ -0.91
DDX55-208ENST00000541259 TRIM56Q9BRZ2 755 aaKnown RBP9.38□□□□□ -0.91
DDX55-208ENST00000541259 ADGRE3Q9BY15 652 aa9.38□□□□□ -0.91
DDX55-208ENST00000541259 PABPC3Q9H361 631 aaKnown RBP9.38□□□□□ -0.91
DDX55-208ENST00000541259 XAB2Q9HCS7 855 aaKnown RBP9.38□□□□□ -0.91
DDX55-208ENST00000541259 SAYSD1Q9NPB0 183 aa9.38□□□□□ -0.91
DDX55-208ENST00000541259 CD93Q9NPY3 652 aa9.38□□□□□ -0.91
DDX55-208ENST00000541259 SYBUQ9NX95 663 aa9.38□□□□□ -0.91
DDX55-208ENST00000541259 DKK3Q9UBP4 350 aa9.38□□□□□ -0.91
DDX55-208ENST00000541259 GGT7Q9UJ14 662 aa9.38□□□□□ -0.91
DDX55-208ENST00000541259 RAB21Q9UL25 225 aa9.38□□□□□ -0.91
DDX55-208ENST00000541259 PHTF1Q9UMS5 762 aa9.38□□□□□ -0.91
DDX55-208ENST00000541259 PPIL1Q9Y3C6 166 aa9.38□□□□□ -0.91
DDX55-208ENST00000541259 KCTD3Q9Y597 815 aa9.38□□□□□ -0.91
DDX55-208ENST00000541259 PLXNB3Q9ULL4 1909 aa9.38□□□□□ -0.91
DDX55-208ENST00000541259 PLXND1Q9Y4D7 1925 aa9.38□□□□□ -0.91
DDX55-208ENST00000541259 PLXNA2O75051 1894 aa9.38□□□□□ -0.91
DDX55-208ENST00000541259 ZNF106Q9H2Y7 1883 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms