RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 BUB1BO60566 1050 aaPredicted RBP7.35□□□□□ -1.23
YBX3-209ENST00000540747 PIGNO95427 931 aa7.35□□□□□ -1.23
YBX3-209ENST00000540747 IGSF6O95976 241 aa7.35□□□□□ -1.23
YBX3-209ENST00000540747 CYP1A1P04798 512 aaPredicted RBP7.35□□□□□ -1.23
YBX3-209ENST00000540747 MMEP08473 750 aa7.35□□□□□ -1.23
YBX3-209ENST00000540747 PLEKP08567 350 aaPredicted RBP7.35□□□□□ -1.23
YBX3-209ENST00000540747 CCL4P13236 92 aa7.35□□□□□ -1.23
YBX3-209ENST00000540747 CTSEP14091 401 aa7.35□□□□□ -1.23
YBX3-209ENST00000540747 CHRNB2P17787 502 aa7.35□□□□□ -1.23
YBX3-209ENST00000540747 MMP8P22894 467 aa7.35□□□□□ -1.23
YBX3-209ENST00000540747 HTR1BP28222 390 aa7.35□□□□□ -1.23
YBX3-209ENST00000540747 LIG3P49916 1009 aa7.35□□□□□ -1.23
YBX3-209ENST00000540747 GSCP56915 257 aaPredicted RBP7.35□□□□□ -1.23
YBX3-209ENST00000540747 FOXK1P85037 733 aa7.35□□□□□ -1.23
YBX3-209ENST00000540747 PTP4A2Q12974 167 aa7.35□□□□□ -1.23
YBX3-209ENST00000540747 SERINC3Q13530 473 aa7.35□□□□□ -1.23
YBX3-209ENST00000540747 CYTH1Q15438 398 aa7.35□□□□□ -1.23
YBX3-209ENST00000540747 TCEA2Q15560 299 aa7.35□□□□□ -1.23
YBX3-209ENST00000540747 MAN2A1Q16706 1144 aa7.35□□□□□ -1.23
YBX3-209ENST00000540747 CLPPQ16740 277 aaPredicted RBP7.35□□□□□ -1.23
YBX3-209ENST00000540747 EFHC2Q5JST6 749 aa7.35□□□□□ -1.23
YBX3-209ENST00000540747 KLHDC7AQ5VTJ3 777 aa7.35□□□□□ -1.23
YBX3-209ENST00000540747 TAF3Q5VWG9 929 aa7.35□□□□□ -1.23
YBX3-209ENST00000540747 NAA35Q5VZE5 725 aa7.35□□□□□ -1.23
YBX3-209ENST00000540747 SPECC1LQ69YQ0 1117 aa7.35□□□□□ -1.23
YBX3-209ENST00000540747 RWDD4Q6NW29 188 aaKnown RBP7.35□□□□□ -1.23
YBX3-209ENST00000540747 ENPP7Q6UWV6 458 aa7.35□□□□□ -1.23
YBX3-209ENST00000540747 STRADAQ7RTN6 431 aa7.35□□□□□ -1.23
YBX3-209ENST00000540747 NRROSQ86YC3 692 aa7.35□□□□□ -1.23
YBX3-209ENST00000540747 UMODL1-AS1Q8N2C9 162 aa7.35□□□□□ -1.23
YBX3-209ENST00000540747 PELI3Q8N2H9 469 aa7.35□□□□□ -1.23
YBX3-209ENST00000540747 Q8N9G6 341 aaPredicted RBP7.35□□□□□ -1.23
YBX3-209ENST00000540747 ATL2Q8NHH9 583 aa7.35□□□□□ -1.23
YBX3-209ENST00000540747 JOSD2Q8TAC2 188 aa7.35□□□□□ -1.23
YBX3-209ENST00000540747 ZNF564Q8TBZ8 553 aaPredicted RBP7.35□□□□□ -1.23
YBX3-209ENST00000540747 GPT2Q8TD30 523 aa7.35□□□□□ -1.23
YBX3-209ENST00000540747 RXFP2Q8WXD0 754 aa7.35□□□□□ -1.23
YBX3-209ENST00000540747 CPA5Q8WXQ8 436 aa7.35□□□□□ -1.23
YBX3-209ENST00000540747 SPOCK2Q92563 424 aa7.35□□□□□ -1.23
YBX3-209ENST00000540747 ANP32BQ92688 251 aaKnown RBP7.35□□□□□ -1.23
YBX3-209ENST00000540747 NKD1Q969G9 470 aa7.35□□□□□ -1.23
YBX3-209ENST00000540747 ECHDC3Q96DC8 303 aa7.35□□□□□ -1.23
YBX3-209ENST00000540747 HMCESQ96FZ2 354 aa7.35□□□□□ -1.23
YBX3-209ENST00000540747 CMKLR1Q99788 373 aa7.35□□□□□ -1.23
YBX3-209ENST00000540747 ARHGAP9Q9BRR9 750 aa7.35□□□□□ -1.23
YBX3-209ENST00000540747 EPN3Q9H201 632 aa7.35□□□□□ -1.23
YBX3-209ENST00000540747 GRPEL1Q9HAV7 217 aa7.35□□□□□ -1.23
YBX3-209ENST00000540747 METTL5Q9NRN9 209 aaKnown RBP7.35□□□□□ -1.23
YBX3-209ENST00000540747 SEPT10Q9P0V9 454 aa7.35□□□□□ -1.23
YBX3-209ENST00000540747 TUBD1Q9UJT1 453 aa7.35□□□□□ -1.23
YBX3-209ENST00000540747 HPCAL4Q9UM19 191 aa7.35□□□□□ -1.23
YBX3-209ENST00000540747 DOLKQ9UPQ8 538 aa7.35□□□□□ -1.23
YBX3-209ENST00000540747 ATP8A1Q9Y2Q0 1164 aa7.35□□□□□ -1.23
YBX3-209ENST00000540747 PRRC2CQ9Y520 2896 aaKnown RBP7.35□□□□□ -1.23
YBX3-209ENST00000540747 TCRBV5S1A1TA0A578 114 aa7.34□□□□□ -1.23
YBX3-209ENST00000540747 FAM170AA1A519 330 aa7.34□□□□□ -1.23
YBX3-209ENST00000540747 RASA4BC9J798 803 aa7.34□□□□□ -1.23
YBX3-209ENST00000540747 F8VZ95 297 aa7.34□□□□□ -1.23
YBX3-209ENST00000540747 RASA4O43374 803 aa7.34□□□□□ -1.23
YBX3-209ENST00000540747 BUB1O43683 1085 aa7.34□□□□□ -1.23
YBX3-209ENST00000540747 GADD45BO75293 160 aaPredicted RBP7.34□□□□□ -1.23
YBX3-209ENST00000540747 CPNE6O95741 557 aa7.34□□□□□ -1.23
YBX3-209ENST00000540747 TNFP01375 233 aa7.34□□□□□ -1.23
YBX3-209ENST00000540747 FUCA1P04066 466 aa7.34□□□□□ -1.23
YBX3-209ENST00000540747 NTRK1P04629 796 aa7.34□□□□□ -1.23
YBX3-209ENST00000540747 FGF3P11487 239 aaPredicted RBP7.34□□□□□ -1.23
YBX3-209ENST00000540747 UCHL3P15374 230 aa7.34□□□□□ -1.23
YBX3-209ENST00000540747 SDC4P31431 198 aa7.34□□□□□ -1.23
YBX3-209ENST00000540747 RGRP47804 291 aa7.34□□□□□ -1.23
YBX3-209ENST00000540747 CSNK1DP48730 415 aa7.34□□□□□ -1.23
YBX3-209ENST00000540747 YBEYP58557 167 aaPredicted RBP7.34□□□□□ -1.23
YBX3-209ENST00000540747 RHOAP61586 193 aa7.34□□□□□ -1.23
YBX3-209ENST00000540747 FMO1Q01740 532 aa7.34□□□□□ -1.23
YBX3-209ENST00000540747 RAD51Q06609 339 aa7.34□□□□□ -1.23
YBX3-209ENST00000540747 SQSTM1Q13501 440 aa7.34□□□□□ -1.23
YBX3-209ENST00000540747 UBAP2LQ14157 1087 aaKnown RBP7.34□□□□□ -1.23
YBX3-209ENST00000540747 PARP15Q460N3 678 aa7.34□□□□□ -1.23
YBX3-209ENST00000540747 AFMIDQ63HM1 303 aa7.34□□□□□ -1.23
YBX3-209ENST00000540747 BRAT1Q6PJG6 821 aa7.34□□□□□ -1.23
YBX3-209ENST00000540747 LIPIQ6XZB0 460 aa7.34□□□□□ -1.23
YBX3-209ENST00000540747 RD3Q7Z3Z2 195 aa7.34□□□□□ -1.23
YBX3-209ENST00000540747 PYROXD2Q8N2H3 581 aa7.34□□□□□ -1.23
YBX3-209ENST00000540747 FAM46DQ8NEK8 389 aa7.34□□□□□ -1.23
YBX3-209ENST00000540747 OR56A4Q8NGH8 313 aa7.34□□□□□ -1.23
YBX3-209ENST00000540747 CCL4L1Q8NHW4 92 aa7.34□□□□□ -1.23
YBX3-209ENST00000540747 GPBAR1Q8TDU6 330 aa7.34□□□□□ -1.23
YBX3-209ENST00000540747 SLC20A1Q8WUM9 679 aa7.34□□□□□ -1.23
YBX3-209ENST00000540747 EXOC2Q96KP1 924 aa7.34□□□□□ -1.23
YBX3-209ENST00000540747 NSMCE3Q96MG7 304 aa7.34□□□□□ -1.23
YBX3-209ENST00000540747 ZNF641Q96N77 438 aaPredicted RBP7.34□□□□□ -1.23
YBX3-209ENST00000540747 TUBGCP5Q96RT8 1024 aa7.34□□□□□ -1.23
YBX3-209ENST00000540747 NUDT22Q9BRQ3 303 aa7.34□□□□□ -1.23
YBX3-209ENST00000540747 LGR4Q9BXB1 951 aa7.34□□□□□ -1.23
YBX3-209ENST00000540747 SPRY4Q9C004 299 aa7.34□□□□□ -1.23
YBX3-209ENST00000540747 TMEM168Q9H0V1 697 aa7.34□□□□□ -1.23
YBX3-209ENST00000540747 CDH19Q9H159 772 aa7.34□□□□□ -1.23
YBX3-209ENST00000540747 NDST4Q9H3R1 872 aa7.34□□□□□ -1.23
YBX3-209ENST00000540747 SUV39H2Q9H5I1 410 aa7.34□□□□□ -1.23
YBX3-209ENST00000540747 LRRC19Q9H756 370 aa7.34□□□□□ -1.23
YBX3-209ENST00000540747 MRPL40Q9NQ50 206 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms