RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 UGP2Q16851 508 aa20.39■□□□□ 0.85
TMEM260-203ENST00000539559 VPS26BQ4G0F5 336 aa20.39■□□□□ 0.85
TMEM260-203ENST00000539559 DUSP28Q4G0W2 176 aa20.39■□□□□ 0.85
TMEM260-203ENST00000539559 KLHL23Q8NBE8 558 aa20.39■□□□□ 0.85
TMEM260-203ENST00000539559 ZMIZ2Q8NF64 920 aa20.39■□□□□ 0.85
TMEM260-203ENST00000539559 DPF3Q92784 378 aa20.39■□□□□ 0.85
TMEM260-203ENST00000539559 ZNF560Q96MR9 790 aa20.39■□□□□ 0.85
TMEM260-203ENST00000539559 NAA50Q9GZZ1 169 aaKnown RBP20.39■□□□□ 0.85
TMEM260-203ENST00000539559 NDFIP2Q9NV92 336 aa20.39■□□□□ 0.85
TMEM260-203ENST00000539559 ANKRD12Q6UB98 2062 aa20.38■□□□□ 0.85
TMEM260-203ENST00000539559 NME4O00746 187 aa20.38■□□□□ 0.85
TMEM260-203ENST00000539559 ATE1O95260 518 aa20.38■□□□□ 0.85
TMEM260-203ENST00000539559 OXTRP30559 389 aa20.38■□□□□ 0.85
TMEM260-203ENST00000539559 YAP1P46937 504 aaKnown RBP20.38■□□□□ 0.85
TMEM260-203ENST00000539559 PSMD7P51665 324 aa20.38■□□□□ 0.85
TMEM260-203ENST00000539559 SLC5A3P53794 718 aa20.38■□□□□ 0.85
TMEM260-203ENST00000539559 KIF19Q2TAC6 998 aa20.38■□□□□ 0.85
TMEM260-203ENST00000539559 SAMD4BQ5PRF9 694 aaKnown RBP20.38■□□□□ 0.85
TMEM260-203ENST00000539559 PPHLN1Q8NEY8 458 aaKnown RBP20.38■□□□□ 0.85
TMEM260-203ENST00000539559 OR2T34Q8NGX1 318 aa20.38■□□□□ 0.85
TMEM260-203ENST00000539559 OR2T3Q8NH03 318 aa20.38■□□□□ 0.85
TMEM260-203ENST00000539559 CYGBQ8WWM9 190 aa20.38■□□□□ 0.85
TMEM260-203ENST00000539559 IRGQQ8WZA9 623 aa20.38■□□□□ 0.85
TMEM260-203ENST00000539559 ALG9Q9H6U8 611 aa20.38■□□□□ 0.85
TMEM260-203ENST00000539559 SARDHQ9UL12 918 aa20.38■□□□□ 0.85
TMEM260-203ENST00000539559 TRAF6Q9Y4K3 522 aa20.38■□□□□ 0.85
TMEM260-203ENST00000539559 COL1A2P08123 1366 aa20.38■□□□□ 0.85
TMEM260-203ENST00000539559 LRRC14BA6NHZ5 514 aa20.38■□□□□ 0.85
TMEM260-203ENST00000539559 ATP6V1G1O75348 118 aa20.38■□□□□ 0.85
TMEM260-203ENST00000539559 SMPD1P17405 629 aa20.38■□□□□ 0.85
TMEM260-203ENST00000539559 CST9Q5W186 159 aa20.38■□□□□ 0.85
TMEM260-203ENST00000539559 PPP4R4Q6NUP7 873 aa20.38■□□□□ 0.85
TMEM260-203ENST00000539559 NTAN1Q96AB6 310 aa20.38■□□□□ 0.85
TMEM260-203ENST00000539559 BRD8Q9H0E9 1235 aa20.38■□□□□ 0.85
TMEM260-203ENST00000539559 SLC8A2Q9UPR5 921 aa20.38■□□□□ 0.85
TMEM260-203ENST00000539559 TCAF1Q9Y4C2 921 aa20.38■□□□□ 0.85
TMEM260-203ENST00000539559 MTSS1O43312 755 aa20.37■□□□□ 0.85
TMEM260-203ENST00000539559 GPR32O75388 356 aa20.37■□□□□ 0.85
TMEM260-203ENST00000539559 CD4P01730 458 aa20.37■□□□□ 0.85
TMEM260-203ENST00000539559 TRAP1Q12931 704 aaKnown RBP20.37■□□□□ 0.85
TMEM260-203ENST00000539559 MAPRE2Q15555 327 aa20.37■□□□□ 0.85
TMEM260-203ENST00000539559 ACBD5Q5T8D3 534 aaPredicted RBP20.37■□□□□ 0.85
TMEM260-203ENST00000539559 PIM3Q86V86 326 aa20.37■□□□□ 0.85
TMEM260-203ENST00000539559 IFNEQ86WN2 208 aa20.37■□□□□ 0.85
TMEM260-203ENST00000539559 CNTN4Q8IWV2 1026 aa20.37■□□□□ 0.85
TMEM260-203ENST00000539559 ALDH16A1Q8IZ83 802 aa20.37■□□□□ 0.85
TMEM260-203ENST00000539559 TCF12Q99081 682 aa20.37■□□□□ 0.85
TMEM260-203ENST00000539559 EFHD1Q9BUP0 239 aa20.37■□□□□ 0.85
TMEM260-203ENST00000539559 SLC25A23Q9BV35 468 aa20.37■□□□□ 0.85
TMEM260-203ENST00000539559 V9GYQ6 96 aa20.37■□□□□ 0.85
TMEM260-203ENST00000539559 RNF103-CHMP3A0A140T963 221 aa20.37■□□□□ 0.85
TMEM260-203ENST00000539559 CD247P20963 164 aa20.37■□□□□ 0.85
TMEM260-203ENST00000539559 APLP1P51693 650 aa20.37■□□□□ 0.85
TMEM260-203ENST00000539559 HUNKP57058 714 aa20.37■□□□□ 0.85
TMEM260-203ENST00000539559 SCAPQ12770 1279 aa20.37■□□□□ 0.85
TMEM260-203ENST00000539559 ARL13BQ3SXY8 428 aa20.37■□□□□ 0.85
TMEM260-203ENST00000539559 FBXO48Q5FWF7 155 aa20.37■□□□□ 0.85
TMEM260-203ENST00000539559 GPR107Q5VW38 600 aa20.37■□□□□ 0.85
TMEM260-203ENST00000539559 IQSEC1Q6DN90 963 aa20.37■□□□□ 0.85
TMEM260-203ENST00000539559 NEPROQ6NW34 567 aa20.37■□□□□ 0.85
TMEM260-203ENST00000539559 ERMP1Q7Z2K6 904 aa20.37■□□□□ 0.85
TMEM260-203ENST00000539559 LINC00523Q86TU6 105 aa20.37■□□□□ 0.85
TMEM260-203ENST00000539559 C2CD4AQ8NCU7 369 aaPredicted RBP20.37■□□□□ 0.85
TMEM260-203ENST00000539559 UHRF1Q96T88 793 aaPredicted RBP20.37■□□□□ 0.85
TMEM260-203ENST00000539559 OSBPL6Q9BZF3 934 aa20.37■□□□□ 0.85
TMEM260-203ENST00000539559 UPF3AQ9H1J1 476 aaKnown RBP20.37■□□□□ 0.85
TMEM260-203ENST00000539559 MAP10Q9P2G4 905 aa20.37■□□□□ 0.85
TMEM260-203ENST00000539559 TTC24A2A3L6 582 aaPredicted RBP20.36■□□□□ 0.85
TMEM260-203ENST00000539559 MEIS3P2A8K0S8 358 aa20.36■□□□□ 0.85
TMEM260-203ENST00000539559 H0YJX3 145 aa20.36■□□□□ 0.85
TMEM260-203ENST00000539559 SUPT3HO75486 399 aa20.36■□□□□ 0.85
TMEM260-203ENST00000539559 MTHFD1P11586 935 aaKnown RBP20.36■□□□□ 0.85
TMEM260-203ENST00000539559 SV2CQ496J9 727 aa20.36■□□□□ 0.85
TMEM260-203ENST00000539559 ZNF554Q86TJ5 538 aa20.36■□□□□ 0.85
TMEM260-203ENST00000539559 GPR180Q86V85 440 aa20.36■□□□□ 0.85
TMEM260-203ENST00000539559 RYBPQ8N488 228 aaPredicted RBP20.36■□□□□ 0.85
TMEM260-203ENST00000539559 NPLOC4Q8TAT6 608 aa20.36■□□□□ 0.85
TMEM260-203ENST00000539559 SLC9A7Q96T83 725 aa20.36■□□□□ 0.85
TMEM260-203ENST00000539559 FSD1LQ9BXM9 530 aa20.36■□□□□ 0.85
TMEM260-203ENST00000539559 GSTO2Q9H4Y5 243 aa20.36■□□□□ 0.85
TMEM260-203ENST00000539559 TANC1Q9C0D5 1861 aa20.36■□□□□ 0.85
TMEM260-203ENST00000539559 CES1P23141 567 aa20.36■□□□□ 0.85
TMEM260-203ENST00000539559 DNAJB13P59910 316 aa20.36■□□□□ 0.85
TMEM260-203ENST00000539559 PFKPQ01813 784 aa20.36■□□□□ 0.85
TMEM260-203ENST00000539559 PMS2P3Q13401 168 aa20.36■□□□□ 0.85
TMEM260-203ENST00000539559 GPR158Q5T848 1215 aa20.36■□□□□ 0.85
TMEM260-203ENST00000539559 XKR5Q6UX68 686 aa20.36■□□□□ 0.85
TMEM260-203ENST00000539559 TAC4Q86UU9 113 aa20.36■□□□□ 0.85
TMEM260-203ENST00000539559 BBS5Q8N3I7 341 aa20.36■□□□□ 0.85
TMEM260-203ENST00000539559 LZTR1Q8N653 840 aa20.36■□□□□ 0.85
TMEM260-203ENST00000539559 ANKFN1Q8N957 763 aa20.36■□□□□ 0.85
TMEM260-203ENST00000539559 OR6J1Q8NGC5 347 aa20.36■□□□□ 0.85
TMEM260-203ENST00000539559 KCTD13Q8WZ19 329 aa20.36■□□□□ 0.85
TMEM260-203ENST00000539559 PCED1BQ96HM7 432 aa20.36■□□□□ 0.85
TMEM260-203ENST00000539559 VAT1Q99536 393 aa20.36■□□□□ 0.85
TMEM260-203ENST00000539559 ADI1Q9BV57 179 aa20.36■□□□□ 0.85
TMEM260-203ENST00000539559 CPA4Q9UI42 421 aa20.36■□□□□ 0.85
TMEM260-203ENST00000539559 OAZ3Q9UMX2 235 aa20.36■□□□□ 0.85
TMEM260-203ENST00000539559 OR51F1A6NGY5 319 aa20.35■□□□□ 0.85
TMEM260-203ENST00000539559 BMP10O95393 424 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms