RNA–Protein interactions for RNA: ENST00000538974.5

RAPGEF4-214, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 2 BASIC

Gene RAPGEF4, Length 3,920 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-214ENST00000538974 GRIN3AQ8TCU5 1115 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 MAPK15Q8TD08 544 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 KHSRPQ92945 711 aaKnown RBP eCLIP7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 SCLYQ96I15 445 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 CDK15Q96Q40 435 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 TUBGCP5Q96RT8 1024 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 MLPHQ9BV36 600 aaPredicted RBP7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 NFKBIZQ9BYH8 718 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 NOL11Q9H8H0 719 aaKnown RBP7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 NMUR1Q9HB89 426 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 MRPL40Q9NQ50 206 aaKnown RBP7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 GID8Q9NWU2 228 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 SIRPGQ9P1W8 387 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 RCOR3Q9P2K3 495 aaPredicted RBP7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 ADAM28Q9UKQ2 775 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 ATP11BQ9Y2G3 1177 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 AP4S1Q9Y587 144 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 PTGDR2Q9Y5Y4 395 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 A0A1W2PQ67 120 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 LRRC14BA6NHZ5 514 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 SERPIND1P05546 499 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 LYNP07948 512 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 SNRPB2P08579 225 aaKnown RBP7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 ITGAXP20702 1163 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 HOXD10P28358 340 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 GSTT1P30711 240 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 RPL9P32969 192 aaKnown RBP7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 ETV4P43268 484 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 PPP3CCP48454 512 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 TRAF2Q12933 501 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 PPP1R8Q12972 351 aaKnown RBP7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 COL9A2Q14055 689 aaPredicted RBP7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 PGS1Q32NB8 556 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 POTEHQ6S545 545 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 ASRGL1Q7L266 308 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 C11orf74Q86VG3 221 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 ZC3HC1Q86WB0 502 aaKnown RBP7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 SLC44A2Q8IWA5 706 aaPredicted RBP7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 PQLC1Q8N2U9 271 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 RNF217Q8TC41 542 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 MAGEE2Q8TD90 523 aaPredicted RBP7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 THAP11Q96EK4 314 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 KCNA7Q96RP8 456 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 CIPCQ9C0C6 399 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 ACTR8Q9H981 624 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 KLQ9UEF7 1012 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 VTI1BQ9UEU0 232 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 GABRQQ9UN88 632 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 ANKRD6Q9Y2G4 727 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 ZNF711Q9Y462 761 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 COL4A5P29400 1685 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 H3BMM5 538 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 MATN3O15232 486 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 CLASP2O75122 1294 aaKnown RBP7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 IPO13O94829 963 aaKnown RBP7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 ESRRBO95718 433 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 HIST1H2AGP0C0S8 130 aaPredicted RBP7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 PRSS56P0CW18 603 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 HAPLN1P10915 354 aaPredicted RBP7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 NCK1P16333 377 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 HIST1H2ADP20671 130 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 PSEN1P49768 467 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 RGS4P49798 205 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 SMAD3P84022 425 aaKnown RBP7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 CREB5Q02930 508 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 NAB1Q13506 487 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 TSNQ15631 228 aaKnown RBP7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 RALGPS2Q86X27 583 aaPredicted RBP7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 CATSPER1Q8NEC5 780 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 SHKBP1Q8TBC3 707 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 GANCQ8TET4 914 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 AUTS2Q8WXX7 1259 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 VPS33AQ96AX1 596 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 DCUN1D1Q96GG9 259 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 SLC45A3Q96JT2 553 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 HIST1H2AHQ96KK5 128 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 GPR21Q99679 349 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 HIST1H2AJQ99878 128 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 SH3GL3Q99963 347 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 KCTD14Q9BQ13 255 aaPredicted RBP7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 ACBD6Q9BR61 282 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 H2AFJQ9BTM1 129 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 DRC3Q9H069 523 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 VRTNQ9H8Y1 702 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 GPBP1L1Q9HC44 474 aaPredicted RBP7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 FETUBQ9UGM5 382 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 LSM7Q9UK45 103 aaKnown RBP7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 HS3ST4Q9Y661 456 aa7.05□□□□□ -1.28
RAPGEF4-214ENST00000538974 C15orf38-AP3S2A0A0A6YYH1 394 aa7.04□□□□□ -1.28
RAPGEF4-214ENST00000538974 AGRPO00253 132 aa7.04□□□□□ -1.28
RAPGEF4-214ENST00000538974 AXIN1O15169 862 aa7.04□□□□□ -1.28
RAPGEF4-214ENST00000538974 DUSP11O75319 330 aaKnown RBP7.04□□□□□ -1.28
RAPGEF4-214ENST00000538974 WFS1O76024 890 aa7.04□□□□□ -1.28
RAPGEF4-214ENST00000538974 ZNF682O95780 498 aa7.04□□□□□ -1.28
RAPGEF4-214ENST00000538974 GOT2P00505 430 aaKnown RBP7.04□□□□□ -1.28
RAPGEF4-214ENST00000538974 FAM58BPP0C7Q3 252 aa7.04□□□□□ -1.28
RAPGEF4-214ENST00000538974 CKMT2P17540 419 aa7.04□□□□□ -1.28
RAPGEF4-214ENST00000538974 CCND3P30281 292 aaPredicted RBP7.04□□□□□ -1.28
RAPGEF4-214ENST00000538974 ACTR3P61158 418 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms