RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 CCDC162PA2VCL2 907 aa20.48■□□□□ 0.87
DDX55-205ENST00000538744 CFAP73A6NFT4 308 aa20.48■□□□□ 0.87
DDX55-205ENST00000538744 OR51F1A6NGY5 319 aa20.48■□□□□ 0.87
DDX55-205ENST00000538744 CD3EAPO15446 510 aaKnown RBP20.48■□□□□ 0.87
DDX55-205ENST00000538744 BUD23O43709 281 aaKnown RBP20.48■□□□□ 0.87
DDX55-205ENST00000538744 LYPLA1O75608 230 aaPredicted RBP20.48■□□□□ 0.87
DDX55-205ENST00000538744 KLHL2O95198 593 aa20.48■□□□□ 0.87
DDX55-205ENST00000538744 ZNF140P52738 457 aaPredicted RBP20.48■□□□□ 0.87
DDX55-205ENST00000538744 PGGT1BP53609 377 aa20.48■□□□□ 0.87
DDX55-205ENST00000538744 ABCE1P61221 599 aaKnown RBP20.48■□□□□ 0.87
DDX55-205ENST00000538744 ZBTB16Q05516 673 aa20.48■□□□□ 0.87
DDX55-205ENST00000538744 GPR158Q5T848 1215 aa20.48■□□□□ 0.87
DDX55-205ENST00000538744 LRRC8EQ6NSJ5 796 aa20.48■□□□□ 0.87
DDX55-205ENST00000538744 GLT6D1Q7Z4J2 308 aa20.48■□□□□ 0.87
DDX55-205ENST00000538744 SHKBP1Q8TBC3 707 aa20.48■□□□□ 0.87
DDX55-205ENST00000538744 SKA1Q96BD8 255 aa20.48■□□□□ 0.87
DDX55-205ENST00000538744 NDNQ99608 321 aa20.48■□□□□ 0.87
DDX55-205ENST00000538744 WWP1Q9H0M0 922 aa20.48■□□□□ 0.87
DDX55-205ENST00000538744 SUDS3Q9H7L9 328 aaPredicted RBP20.48■□□□□ 0.87
DDX55-205ENST00000538744 MARCOQ9UEW3 520 aaPredicted RBP20.48■□□□□ 0.87
DDX55-205ENST00000538744 TMEM114B3SHH9 223 aa20.47■□□□□ 0.87
DDX55-205ENST00000538744 TRIM13O60858 407 aa20.47■□□□□ 0.87
DDX55-205ENST00000538744 DNAJC6O75061 913 aa20.47■□□□□ 0.87
DDX55-205ENST00000538744 UNC5CO95185 931 aa20.47■□□□□ 0.87
DDX55-205ENST00000538744 PDHA1P08559 390 aa20.47■□□□□ 0.87
DDX55-205ENST00000538744 KITP10721 976 aa20.47■□□□□ 0.87
DDX55-205ENST00000538744 PTPN2P17706 415 aa20.47■□□□□ 0.87
DDX55-205ENST00000538744 OGNP20774 298 aaKnown RBP20.47■□□□□ 0.87
DDX55-205ENST00000538744 CCR2P41597 374 aa20.47■□□□□ 0.87
DDX55-205ENST00000538744 PRKAA2P54646 552 aa20.47■□□□□ 0.87
DDX55-205ENST00000538744 TRAF2Q12933 501 aa20.47■□□□□ 0.87
DDX55-205ENST00000538744 PTPRCAPQ14761 206 aa20.47■□□□□ 0.87
DDX55-205ENST00000538744 TPGS1Q6ZTW0 290 aa20.47■□□□□ 0.87
DDX55-205ENST00000538744 CLNKQ7Z7G1 428 aa20.47■□□□□ 0.87
DDX55-205ENST00000538744 TBC1D1Q86TI0 1168 aaPredicted RBP20.47■□□□□ 0.87
DDX55-205ENST00000538744 WDR75Q8IWA0 830 aaKnown RBP20.47■□□□□ 0.87
DDX55-205ENST00000538744 APCDD1Q8J025 514 aa20.47■□□□□ 0.87
DDX55-205ENST00000538744 OR4L1Q8NH43 312 aa20.47■□□□□ 0.87
DDX55-205ENST00000538744 TTC8Q8TAM2 541 aa20.47■□□□□ 0.87
DDX55-205ENST00000538744 PIWIL2Q8TC59 973 aaKnown RBP20.47■□□□□ 0.87
DDX55-205ENST00000538744 MICAL1Q8TDZ2 1067 aa20.47■□□□□ 0.87
DDX55-205ENST00000538744 ACDQ96AP0 544 aa20.47■□□□□ 0.87
DDX55-205ENST00000538744 MTIF3Q9H2K0 278 aaKnown RBP20.47■□□□□ 0.87
DDX55-205ENST00000538744 MAN1C1Q9NR34 630 aa20.47■□□□□ 0.87
DDX55-205ENST00000538744 CATSPERZQ9NTU4 200 aa20.47■□□□□ 0.87
DDX55-205ENST00000538744 OXSMQ9NWU1 459 aa20.47■□□□□ 0.87
DDX55-205ENST00000538744 KIAA1522Q9P206 1035 aaPredicted RBP20.47■□□□□ 0.87
DDX55-205ENST00000538744 CPSF2Q9P2I0 782 aaKnown RBP20.47■□□□□ 0.87
DDX55-205ENST00000538744 CORO1CQ9ULV4 474 aaPredicted RBP20.47■□□□□ 0.87
DDX55-205ENST00000538744 DNAJC16Q9Y2G8 782 aa20.47■□□□□ 0.87
DDX55-205ENST00000538744 FCF1Q9Y324 198 aaKnown RBP20.47■□□□□ 0.87
DDX55-205ENST00000538744 LINC01553A4QN01 128 aa20.47■□□□□ 0.87
DDX55-205ENST00000538744 C2orf81A6NN90 581 aa20.47■□□□□ 0.87
DDX55-205ENST00000538744 TK2O00142 265 aa20.47■□□□□ 0.87
DDX55-205ENST00000538744 CYBBP04839 570 aa20.47■□□□□ 0.87
DDX55-205ENST00000538744 HSPA1AP0DMV8 641 aaKnown RBP20.47■□□□□ 0.87
DDX55-205ENST00000538744 HSPA1BP0DMV9 641 aaKnown RBP20.47■□□□□ 0.87
DDX55-205ENST00000538744 SERPINB3P29508 390 aa20.47■□□□□ 0.87
DDX55-205ENST00000538744 GLRBP48167 497 aa20.47■□□□□ 0.87
DDX55-205ENST00000538744 AP1S1P61966 158 aa20.47■□□□□ 0.87
DDX55-205ENST00000538744 ARHGAP15Q53QZ3 475 aa20.47■□□□□ 0.87
DDX55-205ENST00000538744 HECTD2Q5U5R9 776 aa20.47■□□□□ 0.87
DDX55-205ENST00000538744 SDCCAG8Q86SQ7 713 aaPredicted RBP20.47■□□□□ 0.87
DDX55-205ENST00000538744 LDB1Q86U70 411 aaPredicted RBP20.47■□□□□ 0.87
DDX55-205ENST00000538744 FSTL5Q8N475 847 aaPredicted RBP20.47■□□□□ 0.87
DDX55-205ENST00000538744 FIBINQ8TAL6 211 aa20.47■□□□□ 0.87
DDX55-205ENST00000538744 SH3RF2Q8TEC5 729 aa20.47■□□□□ 0.87
DDX55-205ENST00000538744 NXNL1Q96CM4 212 aa20.47■□□□□ 0.87
DDX55-205ENST00000538744 CDKN2AIPNLQ96HQ2 116 aa20.47■□□□□ 0.87
DDX55-205ENST00000538744 OLFM1Q99784 485 aa20.47■□□□□ 0.87
DDX55-205ENST00000538744 C17orf80Q9BSJ5 609 aa20.47■□□□□ 0.87
DDX55-205ENST00000538744 SMG9Q9H0W8 520 aaKnown RBP20.47■□□□□ 0.87
DDX55-205ENST00000538744 ANKRD66B4E2M5 251 aa20.46■□□□□ 0.87
DDX55-205ENST00000538744 RFPL2O75678 378 aa20.46■□□□□ 0.87
DDX55-205ENST00000538744 PSMA3P25788 255 aa20.46■□□□□ 0.87
DDX55-205ENST00000538744 AQP5P55064 265 aa20.46■□□□□ 0.87
DDX55-205ENST00000538744 LMAN2Q12907 356 aa20.46■□□□□ 0.87
DDX55-205ENST00000538744 FAM45BPQ6NSW5 357 aa20.46■□□□□ 0.87
DDX55-205ENST00000538744 CMTM8Q8IZV2 173 aa20.46■□□□□ 0.87
DDX55-205ENST00000538744 TMEM151AQ8N4L1 468 aa20.46■□□□□ 0.87
DDX55-205ENST00000538744 MDGA1Q8NFP4 955 aa20.46■□□□□ 0.87
DDX55-205ENST00000538744 FAM45AQ8TCE6 357 aa20.46■□□□□ 0.87
DDX55-205ENST00000538744 PDCD6IPQ8WUM4 868 aaKnown RBP20.46■□□□□ 0.87
DDX55-205ENST00000538744 SCG3Q8WXD2 468 aaKnown RBP20.46■□□□□ 0.87
DDX55-205ENST00000538744 USP13Q92995 863 aaPredicted RBP20.46■□□□□ 0.87
DDX55-205ENST00000538744 GPR78Q96P69 363 aa20.46■□□□□ 0.87
DDX55-205ENST00000538744 SORT1Q99523 831 aa20.46■□□□□ 0.87
DDX55-205ENST00000538744 SAR1AQ9NR31 198 aa20.46■□□□□ 0.87
DDX55-205ENST00000538744 PLK2Q9NYY3 685 aa20.46■□□□□ 0.87
DDX55-205ENST00000538744 VWA7Q9Y334 891 aa20.46■□□□□ 0.87
DDX55-205ENST00000538744 MT-CO1P00395 513 aa20.45■□□□□ 0.86
DDX55-205ENST00000538744 ATP5BP06576 529 aaKnown RBP20.45■□□□□ 0.86
DDX55-205ENST00000538744 SBK3P0C264 359 aa20.45■□□□□ 0.86
DDX55-205ENST00000538744 HOXB8P17481 243 aaPredicted RBP20.45■□□□□ 0.86
DDX55-205ENST00000538744 HOXA9P31269 272 aa20.45■□□□□ 0.86
DDX55-205ENST00000538744 DLG1Q12959 904 aa20.45■□□□□ 0.86
DDX55-205ENST00000538744 ATXN7L2Q5T6C5 722 aaPredicted RBP20.45■□□□□ 0.86
DDX55-205ENST00000538744 LIPMQ5VYY2 423 aa20.45■□□□□ 0.86
DDX55-205ENST00000538744 AFTPHQ6ULP2 937 aa20.45■□□□□ 0.86
DDX55-205ENST00000538744 METTL3Q86U44 580 aaKnown RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms