RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 STK39Q9UEW8 545 aa25■■□□□ 1.59
RAB40C-204ENST00000538492 SCOCQ9UIL1 159 aa25■■□□□ 1.59
RAB40C-204ENST00000538492 GREB1Q4ZG55 1949 aa25■■□□□ 1.59
RAB40C-204ENST00000538492 STX16-NPEPL1H3BU86 382 aa25■■□□□ 1.59
RAB40C-204ENST00000538492 VNN2O95498 520 aa25■■□□□ 1.59
RAB40C-204ENST00000538492 SP100P23497 879 aaPredicted RBP25■■□□□ 1.59
RAB40C-204ENST00000538492 C1QTNF8P60827 252 aa25■■□□□ 1.59
RAB40C-204ENST00000538492 ZNF235Q14590 738 aa25■■□□□ 1.59
RAB40C-204ENST00000538492 SETD3Q86TU7 594 aaPredicted RBP25■■□□□ 1.59
RAB40C-204ENST00000538492 CEP70Q8NHQ1 597 aa25■■□□□ 1.59
RAB40C-204ENST00000538492 GDPD5Q8WTR4 605 aa25■■□□□ 1.59
RAB40C-204ENST00000538492 GATA6Q92908 595 aa25■■□□□ 1.59
RAB40C-204ENST00000538492 TADA1Q96BN2 335 aa25■■□□□ 1.59
RAB40C-204ENST00000538492 DNAJC1Q96KC8 554 aaKnown RBP25■■□□□ 1.59
RAB40C-204ENST00000538492 NPAS2Q99743 824 aa25■■□□□ 1.59
RAB40C-204ENST00000538492 TMEM161AQ9NX61 479 aa25■■□□□ 1.59
RAB40C-204ENST00000538492 CASP8AP2Q9UKL3 1982 aa25■■□□□ 1.59
RAB40C-204ENST00000538492 PRPF19Q9UMS4 504 aaKnown RBP25■■□□□ 1.59
RAB40C-204ENST00000538492 A0A0D9SEW6 157 aa25■■□□□ 1.59
RAB40C-204ENST00000538492 H3BNX3 289 aa25■■□□□ 1.59
RAB40C-204ENST00000538492 SLC22A2O15244 555 aa25■■□□□ 1.59
RAB40C-204ENST00000538492 TLR5O60602 858 aa25■■□□□ 1.59
RAB40C-204ENST00000538492 IGLV3-27P01718 113 aa25■■□□□ 1.59
RAB40C-204ENST00000538492 RBP1P09455 135 aa25■■□□□ 1.59
RAB40C-204ENST00000538492 ACAP2Q15057 778 aa25■■□□□ 1.59
RAB40C-204ENST00000538492 CUZD1Q86UP6 607 aa25■■□□□ 1.59
RAB40C-204ENST00000538492 SERPINI1Q99574 410 aa25■■□□□ 1.59
RAB40C-204ENST00000538492 VCXQ9H320 206 aa25■■□□□ 1.59
RAB40C-204ENST00000538492 EBF3Q9H4W6 596 aa25■■□□□ 1.59
RAB40C-204ENST00000538492 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP25■■□□□ 1.59
RAB40C-204ENST00000538492 OR6C75A6NL08 312 aa24.99■■□□□ 1.59
RAB40C-204ENST00000538492 DPP6P42658 865 aa24.99■■□□□ 1.59
RAB40C-204ENST00000538492 ART3Q13508 389 aa24.99■■□□□ 1.59
RAB40C-204ENST00000538492 TRIP10Q15642 601 aa24.99■■□□□ 1.59
RAB40C-204ENST00000538492 SLC14A2Q15849 920 aa24.99■■□□□ 1.59
RAB40C-204ENST00000538492 SFT2D3Q587I9 215 aa24.99■■□□□ 1.59
RAB40C-204ENST00000538492 OR52K2Q8NGK3 314 aa24.99■■□□□ 1.59
RAB40C-204ENST00000538492 CCDC126Q96EE4 140 aa24.99■■□□□ 1.59
RAB40C-204ENST00000538492 DDX50Q9BQ39 737 aaKnown RBP24.99■■□□□ 1.59
RAB40C-204ENST00000538492 WDR41Q9HAD4 459 aa24.99■■□□□ 1.59
RAB40C-204ENST00000538492 ATXN3P54252 364 aaPredicted RBP24.99■■□□□ 1.59
RAB40C-204ENST00000538492 RTP2Q5QGT7 225 aa24.99■■□□□ 1.59
RAB40C-204ENST00000538492 GK5Q6ZS86 529 aa24.99■■□□□ 1.59
RAB40C-204ENST00000538492 LGI2Q8N0V4 545 aa24.99■■□□□ 1.59
RAB40C-204ENST00000538492 OR13C4Q8NGS5 318 aa24.99■■□□□ 1.59
RAB40C-204ENST00000538492 EXT2Q93063 718 aa24.99■■□□□ 1.59
RAB40C-204ENST00000538492 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.99■■□□□ 1.591e-10■■■■■ 39.4
RAB40C-204ENST00000538492 GOT2P00505 430 aaKnown RBP24.98■■□□□ 1.59
RAB40C-204ENST00000538492 XRCC1P18887 633 aaPredicted RBP24.98■■□□□ 1.59
RAB40C-204ENST00000538492 TACR2P21452 398 aa24.98■■□□□ 1.59
RAB40C-204ENST00000538492 ADSLP30566 484 aaPredicted RBP24.98■■□□□ 1.59
RAB40C-204ENST00000538492 PPP1R3AQ16821 1122 aa24.98■■□□□ 1.59
RAB40C-204ENST00000538492 RYBPQ8N488 228 aaPredicted RBP24.98■■□□□ 1.59
RAB40C-204ENST00000538492 SPPL2BQ8TCT7 592 aa24.98■■□□□ 1.59
RAB40C-204ENST00000538492 TMA16Q96EY4 203 aaKnown RBP24.98■■□□□ 1.59
RAB40C-204ENST00000538492 EML4Q9HC35 981 aaKnown RBP24.98■■□□□ 1.59
RAB40C-204ENST00000538492 MARCH5Q9NX47 278 aa24.98■■□□□ 1.59
RAB40C-204ENST00000538492 TCAF2A6NFQ2 919 aa24.98■■□□□ 1.59
RAB40C-204ENST00000538492 PRAMEF11O60813 436 aa24.98■■□□□ 1.59
RAB40C-204ENST00000538492 CEACAM7Q14002 265 aa24.98■■□□□ 1.59
RAB40C-204ENST00000538492 ZNF423Q2M1K9 1284 aa24.98■■□□□ 1.59
RAB40C-204ENST00000538492 PIGGQ5H8A4 983 aa24.98■■□□□ 1.59
RAB40C-204ENST00000538492 PDSS2Q86YH6 399 aa24.98■■□□□ 1.59
RAB40C-204ENST00000538492 STON2Q8WXE9 905 aa24.98■■□□□ 1.59
RAB40C-204ENST00000538492 KLHL4Q9C0H6 718 aa24.98■■□□□ 1.59
RAB40C-204ENST00000538492 EFCAB1Q9HAE3 211 aa24.98■■□□□ 1.59
RAB40C-204ENST00000538492 MAGEA13PA6NCF6 341 aa24.97■■□□□ 1.59
RAB40C-204ENST00000538492 SLC11A1P49279 550 aa24.97■■□□□ 1.59
RAB40C-204ENST00000538492 ISCA2Q86U28 154 aa24.97■■□□□ 1.59
RAB40C-204ENST00000538492 PGAM4Q8N0Y7 254 aa24.97■■□□□ 1.59
RAB40C-204ENST00000538492 YIPF3Q9GZM5 350 aa24.97■■□□□ 1.59
RAB40C-204ENST00000538492 TRPA1O75762 1119 aa24.97■■□□□ 1.59
RAB40C-204ENST00000538492 GLP2RO95838 553 aa24.97■■□□□ 1.59
RAB40C-204ENST00000538492 MT-CO1P00395 513 aa24.97■■□□□ 1.59
RAB40C-204ENST00000538492 ALDH2P05091 517 aa24.97■■□□□ 1.59
RAB40C-204ENST00000538492 ZCCHC18P0CG32 403 aa24.97■■□□□ 1.59
RAB40C-204ENST00000538492 FGFR3P22607 806 aa24.97■■□□□ 1.59
RAB40C-204ENST00000538492 AQP4P55087 323 aa24.97■■□□□ 1.59
RAB40C-204ENST00000538492 TNK2Q07912 1038 aa24.97■■□□□ 1.59
RAB40C-204ENST00000538492 GPR17Q13304 367 aa24.97■■□□□ 1.59
RAB40C-204ENST00000538492 FLOT2Q14254 428 aa24.97■■□□□ 1.59
RAB40C-204ENST00000538492 SEMA3AQ14563 771 aa24.97■■□□□ 1.59
RAB40C-204ENST00000538492 HERC3Q15034 1050 aa24.97■■□□□ 1.59
RAB40C-204ENST00000538492 CLEC6AQ6EIG7 209 aa24.97■■□□□ 1.59
RAB40C-204ENST00000538492 ZNF549Q6P9A3 640 aa24.97■■□□□ 1.59
RAB40C-204ENST00000538492 PELI3Q8N2H9 469 aa24.97■■□□□ 1.59
RAB40C-204ENST00000538492 PCDHB7Q9Y5E2 793 aa24.97■■□□□ 1.59
RAB40C-204ENST00000538492 A0A1W2PQ45 241 aaPredicted RBP24.96■■□□□ 1.59
RAB40C-204ENST00000538492 A0A1W2PQY0 241 aa24.96■■□□□ 1.59
RAB40C-204ENST00000538492 CCDC162PA2VCL2 907 aa24.96■■□□□ 1.59
RAB40C-204ENST00000538492 UBFD1O14562 309 aaKnown RBP24.96■■□□□ 1.59
RAB40C-204ENST00000538492 CD3EAPO15446 510 aaKnown RBP24.96■■□□□ 1.59
RAB40C-204ENST00000538492 SUPT7LO94864 414 aa24.96■■□□□ 1.59
RAB40C-204ENST00000538492 ARMC3Q5W041 872 aa24.96■■□□□ 1.59
RAB40C-204ENST00000538492 GALNT7Q86SF2 657 aa24.96■■□□□ 1.59
RAB40C-204ENST00000538492 TMEM173Q86WV6 379 aaPredicted RBP24.96■■□□□ 1.59
RAB40C-204ENST00000538492 SNX31Q8N9S9 440 aa24.96■■□□□ 1.59
RAB40C-204ENST00000538492 PTERQ96BW5 349 aa24.96■■□□□ 1.59
RAB40C-204ENST00000538492 GSTO2Q9H4Y5 243 aa24.96■■□□□ 1.59
RAB40C-204ENST00000538492 STARD7Q9NQZ5 370 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms