RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 GDF9O60383 454 aa13.15□□□□□ -0.3
CHFR-216ENST00000538235 RHOBTB1O94844 696 aa13.15□□□□□ -0.3
CHFR-216ENST00000538235 PCDH8O95206 1070 aa13.15□□□□□ -0.3
CHFR-216ENST00000538235 TRBC1P01850 177 aa13.15□□□□□ -0.3
CHFR-216ENST00000538235 C6P13671 934 aa13.15□□□□□ -0.3
CHFR-216ENST00000538235 ADRA1AP35348 466 aa13.15□□□□□ -0.3
CHFR-216ENST00000538235 HNF1BP35680 557 aa13.15□□□□□ -0.3
CHFR-216ENST00000538235 IGFALSP35858 605 aa13.15□□□□□ -0.3
CHFR-216ENST00000538235 WNT3AP56704 352 aa13.15□□□□□ -0.3
CHFR-216ENST00000538235 CLDN2P57739 230 aa13.15□□□□□ -0.3
CHFR-216ENST00000538235 RAD51Q06609 339 aa13.15□□□□□ -0.3
CHFR-216ENST00000538235 MSLNQ13421 630 aaPredicted RBP13.15□□□□□ -0.3
CHFR-216ENST00000538235 LONRF2Q1L5Z9 754 aa13.15□□□□□ -0.3
CHFR-216ENST00000538235 RALGPS1Q5JS13 557 aa13.15□□□□□ -0.3
CHFR-216ENST00000538235 SPDYCQ5MJ68 293 aa13.15□□□□□ -0.3
CHFR-216ENST00000538235 SYCP2LQ5T4T6 812 aa13.15□□□□□ -0.3
CHFR-216ENST00000538235 LIPIQ6XZB0 460 aa13.15□□□□□ -0.3
CHFR-216ENST00000538235 BZW1Q7L1Q6 419 aaKnown RBP13.15□□□□□ -0.3
CHFR-216ENST00000538235 PID1Q7Z2X4 250 aa13.15□□□□□ -0.3
CHFR-216ENST00000538235 HSD11B1LQ7Z5J1 315 aa13.15□□□□□ -0.3
CHFR-216ENST00000538235 TTC7BQ86TV6 843 aa13.15□□□□□ -0.3
CHFR-216ENST00000538235 C11orf74Q86VG3 221 aa13.15□□□□□ -0.3
CHFR-216ENST00000538235 CBARPQ8N350 705 aaPredicted RBP13.15□□□□□ -0.3
CHFR-216ENST00000538235 BBS5Q8N3I7 341 aa13.15□□□□□ -0.3
CHFR-216ENST00000538235 TP53I13Q8NBR0 393 aaPredicted RBP13.15□□□□□ -0.3
CHFR-216ENST00000538235 LOXL4Q96JB6 756 aa13.15□□□□□ -0.3
CHFR-216ENST00000538235 APOL2Q9BQE5 337 aa13.15□□□□□ -0.3
CHFR-216ENST00000538235 C1QTNF2Q9BXJ5 285 aa13.15□□□□□ -0.3
CHFR-216ENST00000538235 MIR1-1HGQ9H1L0 117 aa13.15□□□□□ -0.3
CHFR-216ENST00000538235 PCED1AQ9H1Q7 454 aa13.15□□□□□ -0.3
CHFR-216ENST00000538235 KDM4CQ9H3R0 1056 aa13.15□□□□□ -0.3
CHFR-216ENST00000538235 PCDH9Q9HC56 1237 aa13.15□□□□□ -0.3
CHFR-216ENST00000538235 RSPH14Q9UHP6 348 aa13.15□□□□□ -0.3
CHFR-216ENST00000538235 PNMA8BQ9ULN7 279 aaPredicted RBP13.15□□□□□ -0.3
CHFR-216ENST00000538235 TTC7AQ9ULT0 858 aaPredicted RBP13.15□□□□□ -0.3
CHFR-216ENST00000538235 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.15□□□□□ -0.3
CHFR-216ENST00000538235 DCHS1Q96JQ0 3298 aa13.14□□□□□ -0.31
CHFR-216ENST00000538235 LNP1A1A4G5 178 aa13.14□□□□□ -0.31
CHFR-216ENST00000538235 POM121BA6NF01 834 aa13.14□□□□□ -0.31
CHFR-216ENST00000538235 C5orf60A6NFR6 353 aa13.14□□□□□ -0.31
CHFR-216ENST00000538235 CAPN8A6NHC0 703 aa13.14□□□□□ -0.31
CHFR-216ENST00000538235 AURKAO14965 403 aa13.14□□□□□ -0.31
CHFR-216ENST00000538235 USP12O75317 370 aa13.14□□□□□ -0.31
CHFR-216ENST00000538235 HEXIM1O94992 359 aaKnown RBP13.14□□□□□ -0.31
CHFR-216ENST00000538235 SERPINF2P08697 491 aa13.14□□□□□ -0.31
CHFR-216ENST00000538235 CD27P26842 260 aa13.14□□□□□ -0.31
CHFR-216ENST00000538235 MAPK8P45983 427 aa13.14□□□□□ -0.31
CHFR-216ENST00000538235 LIG3P49916 1009 aa13.14□□□□□ -0.31
CHFR-216ENST00000538235 IRX4P78413 519 aa13.14□□□□□ -0.31
CHFR-216ENST00000538235 SPARCL1Q14515 664 aa13.14□□□□□ -0.31
CHFR-216ENST00000538235 GRM3Q14832 879 aa13.14□□□□□ -0.31
CHFR-216ENST00000538235 SLC14A2Q15849 920 aa13.14□□□□□ -0.31
CHFR-216ENST00000538235 CCNG2Q16589 344 aa13.14□□□□□ -0.31
CHFR-216ENST00000538235 CYP1B1Q16678 543 aa13.14□□□□□ -0.31
CHFR-216ENST00000538235 ARMC12Q5T9G4 340 aa13.14□□□□□ -0.31
CHFR-216ENST00000538235 KCTD11Q693B1 232 aa13.14□□□□□ -0.31
CHFR-216ENST00000538235 DENND5AQ6IQ26 1287 aa13.14□□□□□ -0.31
CHFR-216ENST00000538235 CRTC1Q6UUV9 634 aa13.14□□□□□ -0.31
CHFR-216ENST00000538235 SYT10Q6XYQ8 523 aa13.14□□□□□ -0.31
CHFR-216ENST00000538235 ALYREFQ86V81 257 aaKnown RBP13.14□□□□□ -0.31
CHFR-216ENST00000538235 SYT12Q8IV01 421 aa13.14□□□□□ -0.31
CHFR-216ENST00000538235 SLC22A18ASQ8N1D0 253 aa13.14□□□□□ -0.31
CHFR-216ENST00000538235 C12orf50Q8NA57 414 aaPredicted RBP13.14□□□□□ -0.31
CHFR-216ENST00000538235 TTC13Q8NBP0 860 aa13.14□□□□□ -0.31
CHFR-216ENST00000538235 PLA2G15Q8NCC3 412 aa13.14□□□□□ -0.31
CHFR-216ENST00000538235 ACTRT1Q8TDG2 376 aa13.14□□□□□ -0.31
CHFR-216ENST00000538235 HCAR2Q8TDS4 363 aa13.14□□□□□ -0.31
CHFR-216ENST00000538235 RAB7BQ96AH8 199 aa13.14□□□□□ -0.31
CHFR-216ENST00000538235 PBKQ96KB5 322 aa13.14□□□□□ -0.31
CHFR-216ENST00000538235 CAPZA3Q96KX2 299 aa13.14□□□□□ -0.31
CHFR-216ENST00000538235 COQ10AQ96MF6 247 aa13.14□□□□□ -0.31
CHFR-216ENST00000538235 NAPGQ99747 312 aaPredicted RBP13.14□□□□□ -0.31
CHFR-216ENST00000538235 SEMA4GQ9NTN9 838 aa13.14□□□□□ -0.31
CHFR-216ENST00000538235 NCDNQ9UBB6 729 aa13.14□□□□□ -0.31
CHFR-216ENST00000538235 NEU2Q9Y3R4 380 aa13.14□□□□□ -0.31
CHFR-216ENST00000538235 ARID1BQ8NFD5 2236 aaPredicted RBP13.13□□□□□ -0.31
CHFR-216ENST00000538235 A0A1B0GVT2 93 aa13.13□□□□□ -0.31
CHFR-216ENST00000538235 LOC285095A0A1B0GVY8 99 aa13.13□□□□□ -0.31
CHFR-216ENST00000538235 K7ESM1 405 aa13.13□□□□□ -0.31
CHFR-216ENST00000538235 PGRMC1O00264 195 aaKnown RBP13.13□□□□□ -0.31
CHFR-216ENST00000538235 TSPAN6O43657 245 aa13.13□□□□□ -0.31
CHFR-216ENST00000538235 GCATO75600 419 aa13.13□□□□□ -0.31
CHFR-216ENST00000538235 PAK4O96013 591 aaPredicted RBP13.13□□□□□ -0.31
CHFR-216ENST00000538235 AGTP01019 485 aa13.13□□□□□ -0.31
CHFR-216ENST00000538235 VIPR1P32241 457 aa13.13□□□□□ -0.31
CHFR-216ENST00000538235 CA5AP35218 305 aa13.13□□□□□ -0.31
CHFR-216ENST00000538235 RPL22P35268 128 aaKnown RBP13.13□□□□□ -0.31
CHFR-216ENST00000538235 CETN2P41208 172 aa13.13□□□□□ -0.31
CHFR-216ENST00000538235 CSNK1EP49674 416 aaKnown RBP13.13□□□□□ -0.31
CHFR-216ENST00000538235 ETF1P62495 437 aaKnown RBP13.13□□□□□ -0.31
CHFR-216ENST00000538235 FAM193AP78312 1265 aa13.13□□□□□ -0.31
CHFR-216ENST00000538235 IRF4Q15306 451 aa13.13□□□□□ -0.31
CHFR-216ENST00000538235 WSCD2Q2TBF2 565 aa13.13□□□□□ -0.31
CHFR-216ENST00000538235 LRRC66Q68CR7 880 aa13.13□□□□□ -0.31
CHFR-216ENST00000538235 DRICH1Q6PGQ1 229 aaPredicted RBP13.13□□□□□ -0.31
CHFR-216ENST00000538235 LYSMD3Q7Z3D4 306 aa13.13□□□□□ -0.31
CHFR-216ENST00000538235 SPATS2Q86XZ4 545 aaKnown RBP13.13□□□□□ -0.31
CHFR-216ENST00000538235 RGL4Q8IZJ4 473 aa13.13□□□□□ -0.31
CHFR-216ENST00000538235 IPMKQ8NFU5 416 aa13.13□□□□□ -0.31
CHFR-216ENST00000538235 RUBCNQ92622 972 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms